RNA–Protein interactions for RNA: ENST00000541169.1

VPS33A-205, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 4

Gene VPS33A, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-205ENST00000541169 ZNF234Q14588 700 aa19.25■□□□□ 0.67
VPS33A-205ENST00000541169 POLD3Q15054 466 aaPredicted RBP19.25■□□□□ 0.67
VPS33A-205ENST00000541169 SMTNL2Q2TAL5 461 aa19.25■□□□□ 0.67
VPS33A-205ENST00000541169 FNDC3BQ53EP0 1204 aaKnown RBP19.25■□□□□ 0.67
VPS33A-205ENST00000541169 KCNT1Q5JUK3 1230 aa19.25■□□□□ 0.67
VPS33A-205ENST00000541169 ZFYVE27Q5T4F4 411 aa19.25■□□□□ 0.67
VPS33A-205ENST00000541169 EGFLAMQ63HQ2 1017 aa19.25■□□□□ 0.67
VPS33A-205ENST00000541169 ALG14Q96F25 216 aa19.25■□□□□ 0.67
VPS33A-205ENST00000541169 KCTD15Q96SI1 283 aaPredicted RBP19.25■□□□□ 0.67
VPS33A-205ENST00000541169 CWC15Q9P013 229 aaKnown RBP19.25■□□□□ 0.67
VPS33A-205ENST00000541169 EBF1Q9UH73 591 aa19.25■□□□□ 0.67
VPS33A-205ENST00000541169 INTS6Q9UL03 887 aaKnown RBP19.25■□□□□ 0.67
VPS33A-205ENST00000541169 ERVW-1Q9UQF0 538 aa19.25■□□□□ 0.67
VPS33A-205ENST00000541169 STON1Q9Y6Q2 735 aa19.25■□□□□ 0.67
VPS33A-205ENST00000541169 APBB3O95704 486 aa19.24■□□□□ 0.67
VPS33A-205ENST00000541169 HOXB2P14652 356 aa19.24■□□□□ 0.67
VPS33A-205ENST00000541169 GOT1P17174 413 aa19.24■□□□□ 0.67
VPS33A-205ENST00000541169 COMTP21964 271 aa19.24■□□□□ 0.67
VPS33A-205ENST00000541169 CDH6P55285 790 aa19.24■□□□□ 0.67
VPS33A-205ENST00000541169 CCZ1BP86790 482 aa19.24■□□□□ 0.67
VPS33A-205ENST00000541169 CCZ1P86791 482 aaPredicted RBP19.24■□□□□ 0.67
VPS33A-205ENST00000541169 CCDC173Q0VFZ6 552 aa19.24■□□□□ 0.67
VPS33A-205ENST00000541169 DPYSQ14117 519 aa19.24■□□□□ 0.67
VPS33A-205ENST00000541169 ANGPT1Q15389 498 aa19.24■□□□□ 0.67
VPS33A-205ENST00000541169 EMC10Q5UCC4 262 aa19.24■□□□□ 0.67
VPS33A-205ENST00000541169 LRRC49Q8IUZ0 686 aa19.24■□□□□ 0.67
VPS33A-205ENST00000541169 SFTPA1Q8IWL2 248 aa19.24■□□□□ 0.67
VPS33A-205ENST00000541169 DESI2Q9BSY9 194 aa19.24■□□□□ 0.67
VPS33A-205ENST00000541169 LACRTQ9GZZ8 138 aa19.24■□□□□ 0.67
VPS33A-205ENST00000541169 TMEM245Q9H330 911 aa19.24■□□□□ 0.67
VPS33A-205ENST00000541169 GPATCH2LQ9NWQ4 482 aa19.24■□□□□ 0.67
VPS33A-205ENST00000541169 ZNF318Q5VUA4 2279 aa19.24■□□□□ 0.67
VPS33A-205ENST00000541169 TARSL2A2RTX5 802 aaKnown RBP19.23■□□□□ 0.67
VPS33A-205ENST00000541169 RCCD1A6NED2 376 aa19.23■□□□□ 0.67
VPS33A-205ENST00000541169 TCF4P15884 667 aa19.23■□□□□ 0.67
VPS33A-205ENST00000541169 MZF1P28698 734 aaPredicted RBP19.23■□□□□ 0.67
VPS33A-205ENST00000541169 PTPN5P54829 565 aa19.23■□□□□ 0.67
VPS33A-205ENST00000541169 CA9Q16790 459 aa19.23■□□□□ 0.67
VPS33A-205ENST00000541169 PTPRNQ16849 979 aa19.23■□□□□ 0.67
VPS33A-205ENST00000541169 DAB2IPQ5VWQ8 1189 aa19.23■□□□□ 0.67
VPS33A-205ENST00000541169 IL31Q6EBC2 164 aa19.23■□□□□ 0.67
VPS33A-205ENST00000541169 ZC3H14Q6PJT7 736 aaKnown RBP19.23■□□□□ 0.67
VPS33A-205ENST00000541169 TMCO3Q6UWJ1 677 aa19.23■□□□□ 0.67
VPS33A-205ENST00000541169 APCDD1Q8J025 514 aa19.23■□□□□ 0.67
VPS33A-205ENST00000541169 CCDC33Q8N5R6 958 aa19.23■□□□□ 0.67
VPS33A-205ENST00000541169 TSTD1Q8NFU3 115 aa19.23■□□□□ 0.67
VPS33A-205ENST00000541169 CASKIN2Q8WXE0 1202 aa19.23■□□□□ 0.67
VPS33A-205ENST00000541169 TSC1Q92574 1164 aa19.23■□□□□ 0.67
VPS33A-205ENST00000541169 CSPG4P5Q96PW8 444 aa19.23■□□□□ 0.67
VPS33A-205ENST00000541169 ACE2Q9BYF1 805 aaPredicted RBP19.23■□□□□ 0.67
VPS33A-205ENST00000541169 PCDH18Q9HCL0 1135 aa19.23■□□□□ 0.67
VPS33A-205ENST00000541169 ATP13A1Q9HD20 1204 aa19.23■□□□□ 0.67
VPS33A-205ENST00000541169 DNAI1Q9UI46 699 aa19.23■□□□□ 0.67
VPS33A-205ENST00000541169 HS3ST2Q9Y278 367 aa19.23■□□□□ 0.67
VPS33A-205ENST00000541169 CCDC66A2RUB6 948 aa19.22■□□□□ 0.67
VPS33A-205ENST00000541169 ARHGAP42A6NI28 874 aa19.22■□□□□ 0.67
VPS33A-205ENST00000541169 SGK1O00141 431 aa19.22■□□□□ 0.67
VPS33A-205ENST00000541169 ADAM23O75077 832 aa19.22■□□□□ 0.67
VPS33A-205ENST00000541169 ERCC2P18074 760 aa19.22■□□□□ 0.67
VPS33A-205ENST00000541169 CNR2P34972 360 aa19.22■□□□□ 0.67
VPS33A-205ENST00000541169 ARSEP51690 589 aa19.22■□□□□ 0.67
VPS33A-205ENST00000541169 TAS2R40P59535 323 aa19.22■□□□□ 0.67
VPS33A-205ENST00000541169 BYSLQ13895 437 aaKnown RBP19.22■□□□□ 0.67
VPS33A-205ENST00000541169 ARHGEF2Q92974 986 aaKnown RBP19.22■□□□□ 0.67
VPS33A-205ENST00000541169 CCDC114Q96M63 670 aa19.22■□□□□ 0.67
VPS33A-205ENST00000541169 CALN1Q9BXU9 219 aa19.22■□□□□ 0.67
VPS33A-205ENST00000541169 MAGEB5Q9BZ81 275 aa19.22■□□□□ 0.67
VPS33A-205ENST00000541169 HCN2Q9UL51 889 aa19.22■□□□□ 0.67
VPS33A-205ENST00000541169 DUSP10Q9Y6W6 482 aa19.22■□□□□ 0.67
VPS33A-205ENST00000541169 CHD5Q8TDI0 1954 aa19.22■□□□□ 0.67
VPS33A-205ENST00000541169 A0A0D9SEW6 157 aa19.21■□□□□ 0.67
VPS33A-205ENST00000541169 EDDM13A0A1B0GTR0 161 aa19.21■□□□□ 0.67
VPS33A-205ENST00000541169 MIF4GDA9UHW6 222 aaKnown RBP19.21■□□□□ 0.67
VPS33A-205ENST00000541169 CBX4O00257 560 aa19.21■□□□□ 0.67
VPS33A-205ENST00000541169 BUB1O43683 1085 aa19.21■□□□□ 0.67
VPS33A-205ENST00000541169 KDELR3O43731 214 aa19.21■□□□□ 0.67
VPS33A-205ENST00000541169 ATP9BO43861 1147 aa19.21■□□□□ 0.67
VPS33A-205ENST00000541169 EPHX1P07099 455 aa19.21■□□□□ 0.67
VPS33A-205ENST00000541169 C7P10643 843 aa19.21■□□□□ 0.67
VPS33A-205ENST00000541169 ZFXP17010 805 aaPredicted RBP19.21■□□□□ 0.67
VPS33A-205ENST00000541169 KDELR1P24390 212 aa19.21■□□□□ 0.67
VPS33A-205ENST00000541169 IL12RB1P42701 662 aa19.21■□□□□ 0.67
VPS33A-205ENST00000541169 SATB1Q01826 763 aa19.21■□□□□ 0.67
VPS33A-205ENST00000541169 CSTF1Q05048 431 aaKnown RBP19.21■□□□□ 0.67
VPS33A-205ENST00000541169 SFSWAPQ12872 951 aaKnown RBP19.21■□□□□ 0.67
VPS33A-205ENST00000541169 CAMK2GQ13555 558 aaPredicted RBP19.21■□□□□ 0.67
VPS33A-205ENST00000541169 HNRNPA1L2Q32P51 320 aaKnown RBP19.21■□□□□ 0.67
VPS33A-205ENST00000541169 TMCO4Q5TGY1 634 aa19.21■□□□□ 0.67
VPS33A-205ENST00000541169 TXNRD3NBQ6F5E7 133 aa19.21■□□□□ 0.67
VPS33A-205ENST00000541169 PKN3Q6P5Z2 889 aa19.21■□□□□ 0.67
VPS33A-205ENST00000541169 RCOR2Q8IZ40 523 aa19.21■□□□□ 0.67
VPS33A-205ENST00000541169 OR52K2Q8NGK3 314 aa19.21■□□□□ 0.67
VPS33A-205ENST00000541169 CYB5D2Q8WUJ1 264 aa19.21■□□□□ 0.67
VPS33A-205ENST00000541169 SORCS1Q8WY21 1168 aa19.21■□□□□ 0.67
VPS33A-205ENST00000541169 FAF2Q96CS3 445 aa19.21■□□□□ 0.67
VPS33A-205ENST00000541169 SPON2Q9BUD6 331 aa19.21■□□□□ 0.67
VPS33A-205ENST00000541169 CEP44Q9C0F1 390 aa19.21■□□□□ 0.67
VPS33A-205ENST00000541169 ZSCAN32Q9NX65 697 aa19.21■□□□□ 0.67
VPS33A-205ENST00000541169 CACNA2D2Q9NY47 1150 aa19.21■□□□□ 0.67
VPS33A-205ENST00000541169 VPS51Q9UID3 782 aa19.21■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms