RNA–Protein interactions for RNA: ENST00000540963.1

CHFR-218, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2

Gene CHFR, Length 875 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-218ENST00000540963 STK19P49842 368 aaPredicted RBP27.63■■■□□ 2.01
CHFR-218ENST00000540963 SETMARQ53H47 684 aaPredicted RBP27.63■■■□□ 2.01
CHFR-218ENST00000540963 ZNF658Q5TYW1 1059 aaPredicted RBP27.63■■■□□ 2.01
CHFR-218ENST00000540963 ANKRD40Q6AI12 368 aa27.63■■■□□ 2.01
CHFR-218ENST00000540963 ZNF605Q86T29 641 aa27.63■■■□□ 2.01
CHFR-218ENST00000540963 TAC4Q86UU9 113 aa27.63■■■□□ 2.01
CHFR-218ENST00000540963 CHSY1Q86X52 802 aa27.63■■■□□ 2.01
CHFR-218ENST00000540963 ERICH1Q86X53 443 aa27.63■■■□□ 2.01
CHFR-218ENST00000540963 ZNF843Q8N446 348 aa27.63■■■□□ 2.01
CHFR-218ENST00000540963 OR8D1Q8WZ84 308 aa27.63■■■□□ 2.01
CHFR-218ENST00000540963 GTPBP4Q9BZE4 634 aaKnown RBP27.63■■■□□ 2.01
CHFR-218ENST00000540963 CFAP46Q8IYW2 2715 aa27.63■■■□□ 2.01
CHFR-218ENST00000540963 MGAQ8IWI9 3026 aa27.62■■■□□ 2.01
CHFR-218ENST00000540963 ALOX15BO15296 676 aa27.62■■■□□ 2.01
CHFR-218ENST00000540963 PLA2G2AP14555 144 aa27.62■■■□□ 2.01
CHFR-218ENST00000540963 MEA1Q16626 185 aa27.62■■■□□ 2.01
CHFR-218ENST00000540963 RAP1GAP2Q684P5 730 aa27.62■■■□□ 2.01
CHFR-218ENST00000540963 SPACA3Q8IXA5 215 aa27.62■■■□□ 2.01
CHFR-218ENST00000540963 PPM1KQ8N3J5 372 aa27.62■■■□□ 2.01
CHFR-218ENST00000540963 STK32AQ8WU08 396 aa27.62■■■□□ 2.01
CHFR-218ENST00000540963 GSDMAQ96QA5 445 aa27.62■■■□□ 2.01
CHFR-218ENST00000540963 GOLPH3LQ9H4A5 285 aa27.62■■■□□ 2.01
CHFR-218ENST00000540963 SLC12A6Q9UHW9 1150 aa27.62■■■□□ 2.01
CHFR-218ENST00000540963 XPO7Q9UIA9 1087 aaKnown RBP27.62■■■□□ 2.01
CHFR-218ENST00000540963 F5H5T6 163 aa27.61■■■□□ 2.01
CHFR-218ENST00000540963 RTN2O75298 545 aa27.61■■■□□ 2.01
CHFR-218ENST00000540963 IGLV3-25P01717 112 aa27.61■■■□□ 2.01
CHFR-218ENST00000540963 GPD2P43304 727 aa27.61■■■□□ 2.01
CHFR-218ENST00000540963 CETN1Q12798 172 aa27.61■■■□□ 2.01
CHFR-218ENST00000540963 HS1BP3Q53T59 392 aa27.61■■■□□ 2.01
CHFR-218ENST00000540963 SYPL2Q5VXT5 272 aa27.61■■■□□ 2.01
CHFR-218ENST00000540963 CCAR2Q8N163 923 aaKnown RBP27.61■■■□□ 2.01
CHFR-218ENST00000540963 ATP6V0D2Q8N8Y2 350 aa27.61■■■□□ 2.01
CHFR-218ENST00000540963 ERCC4Q92889 916 aaPredicted RBP27.61■■■□□ 2.01
CHFR-218ENST00000540963 PREBQ9HCU5 417 aa27.61■■■□□ 2.01
CHFR-218ENST00000540963 SLTMQ9NWH9 1034 aaKnown RBP eCLIP27.61■■■□□ 2.01
CHFR-218ENST00000540963 A0A1B0GVM2 712 aa27.6■■■□□ 2.01
CHFR-218ENST00000540963 TCAF2A6NFQ2 919 aa27.6■■■□□ 2.01
CHFR-218ENST00000540963 C1QTNF3-AMACRE9PGA6 284 aa27.6■■■□□ 2.01
CHFR-218ENST00000540963 ERVH48-1M5A8F1 160 aa27.6■■■□□ 2.01
CHFR-218ENST00000540963 P4HA2O15460 535 aa27.6■■■□□ 2.01
CHFR-218ENST00000540963 SIGLEC6O43699 453 aa27.6■■■□□ 2.01
CHFR-218ENST00000540963 ATP9BO43861 1147 aa27.6■■■□□ 2.01
CHFR-218ENST00000540963 MT-CO3P00414 261 aa27.6■■■□□ 2.01
CHFR-218ENST00000540963 VAV1P15498 845 aa27.6■■■□□ 2.01
CHFR-218ENST00000540963 GCNT1Q02742 428 aa27.6■■■□□ 2.01
CHFR-218ENST00000540963 EIF4EBP2Q13542 120 aaPredicted RBP27.6■■■□□ 2.01
CHFR-218ENST00000540963 ZC3H12AQ5D1E8 599 aaKnown RBP27.6■■■□□ 2.01
CHFR-218ENST00000540963 AGBL4Q5VU57 503 aa27.6■■■□□ 2.01
CHFR-218ENST00000540963 ZNF248Q8NDW4 579 aa27.6■■■□□ 2.01
CHFR-218ENST00000540963 OR4C6Q8NH72 309 aa27.6■■■□□ 2.01
CHFR-218ENST00000540963 WBP1Q96G27 269 aa27.6■■■□□ 2.01
CHFR-218ENST00000540963 KLHDC7BQ96G42 594 aa27.6■■■□□ 2.01
CHFR-218ENST00000540963 ZNF578Q96N58 590 aaPredicted RBP27.6■■■□□ 2.01
CHFR-218ENST00000540963 POPDC2Q9HBU9 364 aa27.6■■■□□ 2.01
CHFR-218ENST00000540963 PPM1HQ9ULR3 514 aa27.6■■■□□ 2.01
CHFR-218ENST00000540963 KCNU1A8MYU2 1149 aa27.59■■■□□ 2.01
CHFR-218ENST00000540963 TRIM38O00635 465 aa27.59■■■□□ 2.01
CHFR-218ENST00000540963 MCF2LO15068 1137 aa27.59■■■□□ 2.01
CHFR-218ENST00000540963 SLC2A3P11169 496 aa27.59■■■□□ 2.01
CHFR-218ENST00000540963 PDGFRAP16234 1089 aa27.59■■■□□ 2.01
CHFR-218ENST00000540963 MAT2AP31153 395 aaKnown RBP27.59■■■□□ 2.01
CHFR-218ENST00000540963 PMS1P54277 932 aaKnown RBP27.59■■■□□ 2.01
CHFR-218ENST00000540963 UCNP55089 124 aa27.59■■■□□ 2.01
CHFR-218ENST00000540963 RABGAP1LQ5R372 815 aa27.59■■■□□ 2.01
CHFR-218ENST00000540963 NEK5Q6P3R8 708 aa27.59■■■□□ 2.01
CHFR-218ENST00000540963 LSMEM2Q8N112 164 aa27.59■■■□□ 2.01
CHFR-218ENST00000540963 SLC25A45Q8N413 288 aa27.59■■■□□ 2.01
CHFR-218ENST00000540963 LMO3Q8TAP4 145 aa27.59■■■□□ 2.01
CHFR-218ENST00000540963 PRMT1Q99873 361 aaKnown RBP27.59■■■□□ 2.01
CHFR-218ENST00000540963 SLC4A5Q9BY07 1137 aa27.59■■■□□ 2.01
CHFR-218ENST00000540963 ST7Q9NRC1 585 aa27.59■■■□□ 2.01
CHFR-218ENST00000540963 KLHL11Q9NVR0 708 aa27.59■■■□□ 2.01
CHFR-218ENST00000540963 SARDHQ9UL12 918 aa27.59■■■□□ 2.01
CHFR-218ENST00000540963 ATMQ13315 3056 aa27.59■■■□□ 2.01
CHFR-218ENST00000540963 ZNF462Q96JM2 2506 aa27.59■■■□□ 2.01
CHFR-218ENST00000540963 TRUB2O95900 331 aaKnown RBP27.58■■■□□ 2.01
CHFR-218ENST00000540963 METAP1P53582 386 aa27.58■■■□□ 2.01
CHFR-218ENST00000540963 CCDC173Q0VFZ6 552 aa27.58■■■□□ 2.01
CHFR-218ENST00000540963 MTA1Q13330 715 aa27.58■■■□□ 2.01
CHFR-218ENST00000540963 TMEM145Q8NBT3 493 aa27.58■■■□□ 2.01
CHFR-218ENST00000540963 MED15Q96RN5 788 aa27.58■■■□□ 2.01
CHFR-218ENST00000540963 LGMNQ99538 433 aa27.58■■■□□ 2.01
CHFR-218ENST00000540963 SLC25A13Q9UJS0 675 aa27.58■■■□□ 2.01
CHFR-218ENST00000540963 CNTN6Q9UQ52 1028 aa27.58■■■□□ 2.01
CHFR-218ENST00000540963 ATP6V1DQ9Y5K8 247 aa27.58■■■□□ 2.01
CHFR-218ENST00000540963 SDC3O75056 442 aa27.57■■■□□ 2
CHFR-218ENST00000540963 DXOO77932 396 aaKnown RBP27.57■■■□□ 2
CHFR-218ENST00000540963 DGKAP23743 735 aa27.57■■■□□ 2
CHFR-218ENST00000540963 PCBP4P57723 403 aaKnown RBP27.57■■■□□ 2
CHFR-218ENST00000540963 YWHAZP63104 245 aaKnown RBP27.57■■■□□ 2
CHFR-218ENST00000540963 CXADRP78310 365 aa27.57■■■□□ 2
CHFR-218ENST00000540963 DAB2P98082 770 aa27.57■■■□□ 2
CHFR-218ENST00000540963 CFHR1Q03591 330 aa27.57■■■□□ 2
CHFR-218ENST00000540963 CCDC15Q0P6D6 951 aa27.57■■■□□ 2
CHFR-218ENST00000540963 CNTN1Q12860 1018 aa27.57■■■□□ 2
CHFR-218ENST00000540963 PNOCQ13519 176 aa27.57■■■□□ 2
CHFR-218ENST00000540963 CDCP2Q5VXM1 449 aa27.57■■■□□ 2
CHFR-218ENST00000540963 CXorf57Q6NSI4 855 aaKnown RBP27.57■■■□□ 2
CHFR-218ENST00000540963 KDM7AQ6ZMT4 941 aa27.57■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms