RNA–Protein interactions for RNA: ENST00000540812.1

TRIM65-203, Transcript of tripartite motif containing 65, humanhuman

TSL 2

Gene TRIM65, Length 385 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM65-203ENST00000540812 ENC1O14682 589 aa16.72■□□□□ 0.27
TRIM65-203ENST00000540812 LATO43561 262 aa16.72■□□□□ 0.27
TRIM65-203ENST00000540812 RTN2O75298 545 aa16.72■□□□□ 0.27
TRIM65-203ENST00000540812 ITGAVP06756 1048 aa16.72■□□□□ 0.27
TRIM65-203ENST00000540812 ABCB4P21439 1286 aa16.72■□□□□ 0.27
TRIM65-203ENST00000540812 EPHA8P29322 1005 aaPredicted RBP16.72■□□□□ 0.27
TRIM65-203ENST00000540812 CCR1P32246 355 aa16.72■□□□□ 0.27
TRIM65-203ENST00000540812 NXPH1P58417 271 aa16.72■□□□□ 0.27
TRIM65-203ENST00000540812 SULT2A1Q06520 285 aa16.72■□□□□ 0.27
TRIM65-203ENST00000540812 AUHQ13825 339 aaKnown RBP16.72■□□□□ 0.27
TRIM65-203ENST00000540812 POM121L1PQ3SYA9 428 aa16.72■□□□□ 0.27
TRIM65-203ENST00000540812 RABGAP1LQ5R372 815 aa16.72■□□□□ 0.27
TRIM65-203ENST00000540812 TTC39BQ5VTQ0 682 aaPredicted RBP16.72■□□□□ 0.27
TRIM65-203ENST00000540812 FAM183BPQ6ZVS7 135 aa16.72■□□□□ 0.27
TRIM65-203ENST00000540812 C14orf80Q86SX3 495 aa16.72■□□□□ 0.27
TRIM65-203ENST00000540812 CREBRFQ8IUR6 639 aa16.72■□□□□ 0.27
TRIM65-203ENST00000540812 RNF34Q969K3 372 aa16.72■□□□□ 0.27
TRIM65-203ENST00000540812 FAM131CQ96AQ9 280 aa16.72■□□□□ 0.27
TRIM65-203ENST00000540812 CNDP2Q96KP4 475 aaKnown RBP16.72■□□□□ 0.27
TRIM65-203ENST00000540812 RPRD1AQ96P16 312 aaPredicted RBP16.72■□□□□ 0.27
TRIM65-203ENST00000540812 SPAG5Q96R06 1193 aa16.72■□□□□ 0.27
TRIM65-203ENST00000540812 ASNSD1Q9NWL6 643 aa16.72■□□□□ 0.27
TRIM65-203ENST00000540812 ARHGAP20Q9P2F6 1191 aa16.72■□□□□ 0.27
TRIM65-203ENST00000540812 VANGL2Q9ULK5 521 aa16.72■□□□□ 0.27
TRIM65-203ENST00000540812 TBC1D3DA0A087WVF3 549 aa16.71■□□□□ 0.27
TRIM65-203ENST00000540812 TBC1D3IA0A087WXS9 549 aa16.71■□□□□ 0.27
TRIM65-203ENST00000540812 TBC1D3EA0A087X179 549 aa16.71■□□□□ 0.27
TRIM65-203ENST00000540812 TBC1D3KA0A087X1G2 549 aa16.71■□□□□ 0.27
TRIM65-203ENST00000540812 TBC1D3FA6NER0 549 aaPredicted RBP16.71■□□□□ 0.27
TRIM65-203ENST00000540812 TBC1D3LB9A6J9 549 aa16.71■□□□□ 0.27
TRIM65-203ENST00000540812 TLR4O00206 839 aa16.71■□□□□ 0.27
TRIM65-203ENST00000540812 HSF2BPO75031 334 aa16.71■□□□□ 0.27
TRIM65-203ENST00000540812 FGFR1OPO95684 399 aaKnown RBP16.71■□□□□ 0.27
TRIM65-203ENST00000540812 LDOC1O95751 146 aaPredicted RBP16.71■□□□□ 0.27
TRIM65-203ENST00000540812 GLI1P08151 1106 aa16.71■□□□□ 0.27
TRIM65-203ENST00000540812 TBC1D3HP0C7X1 549 aa16.71■□□□□ 0.27
TRIM65-203ENST00000540812 SLC2A3P11169 496 aa16.71■□□□□ 0.27
TRIM65-203ENST00000540812 MAT2AP31153 395 aaKnown RBP16.71■□□□□ 0.27
TRIM65-203ENST00000540812 NNMTP40261 264 aa16.71■□□□□ 0.27
TRIM65-203ENST00000540812 BNIP3Q12983 259 aa16.71■□□□□ 0.27
TRIM65-203ENST00000540812 ACCSLQ4AC99 568 aa16.71■□□□□ 0.27
TRIM65-203ENST00000540812 SOWAHCQ53LP3 525 aaPredicted RBP16.71■□□□□ 0.27
TRIM65-203ENST00000540812 TBC1D3GQ6DHY5 549 aa16.71■□□□□ 0.27
TRIM65-203ENST00000540812 OR6B2Q6IFH4 312 aa16.71■□□□□ 0.27
TRIM65-203ENST00000540812 TBC1D3CQ6IPX1 549 aa16.71■□□□□ 0.27
TRIM65-203ENST00000540812 SPATS2Q86XZ4 545 aaKnown RBP16.71■□□□□ 0.27
TRIM65-203ENST00000540812 TBC1D3Q8IZP1 549 aaPredicted RBP16.71■□□□□ 0.27
TRIM65-203ENST00000540812 EID2Q8N6I1 236 aa16.71■□□□□ 0.27
TRIM65-203ENST00000540812 C1orf131Q8NDD1 294 aaKnown RBP16.71■□□□□ 0.27
TRIM65-203ENST00000540812 SHC3Q92529 594 aa16.71■□□□□ 0.27
TRIM65-203ENST00000540812 FEM1AQ9BSK4 669 aa16.71■□□□□ 0.27
TRIM65-203ENST00000540812 APEX2Q9UBZ4 518 aa16.71■□□□□ 0.27
TRIM65-203ENST00000540812 PCDHGA1Q9Y5H4 931 aa16.71■□□□□ 0.27
TRIM65-203ENST00000540812 OR51B4Q9Y5P0 310 aa16.71■□□□□ 0.27
TRIM65-203ENST00000540812 HS3ST4Q9Y661 456 aa16.71■□□□□ 0.27
TRIM65-203ENST00000540812 COL5A1P20908 1838 aaPredicted RBP16.7■□□□□ 0.26
TRIM65-203ENST00000540812 PLRG1O43660 514 aaKnown RBP16.7■□□□□ 0.26
TRIM65-203ENST00000540812 ATP9BO43861 1147 aa16.7■□□□□ 0.26
TRIM65-203ENST00000540812 ERBB2P04626 1255 aa16.7■□□□□ 0.26
TRIM65-203ENST00000540812 VASPP50552 380 aaPredicted RBP16.7■□□□□ 0.26
TRIM65-203ENST00000540812 CNTN1Q12860 1018 aa16.7■□□□□ 0.26
TRIM65-203ENST00000540812 NME3Q13232 169 aa16.7■□□□□ 0.26
TRIM65-203ENST00000540812 EFHC1Q5JVL4 640 aa16.7■□□□□ 0.26
TRIM65-203ENST00000540812 AGBL4Q5VU57 503 aa16.7■□□□□ 0.26
TRIM65-203ENST00000540812 OTUD1Q5VV17 481 aaPredicted RBP16.7■□□□□ 0.26
TRIM65-203ENST00000540812 NAPEPLDQ6IQ20 393 aa16.7■□□□□ 0.26
TRIM65-203ENST00000540812 OLFML1Q6UWY5 402 aa16.7■□□□□ 0.26
TRIM65-203ENST00000540812 GBP6Q6ZN66 633 aa16.7■□□□□ 0.26
TRIM65-203ENST00000540812 C11orf57Q6ZUT1 292 aaPredicted RBP16.7■□□□□ 0.26
TRIM65-203ENST00000540812 Q6ZVU0 165 aa16.7■□□□□ 0.26
TRIM65-203ENST00000540812 PRPF39Q86UA1 669 aaKnown RBP16.7■□□□□ 0.26
TRIM65-203ENST00000540812 TMPRSS12Q86WS5 348 aa16.7■□□□□ 0.26
TRIM65-203ENST00000540812 IRF2BP1Q8IU81 584 aa16.7■□□□□ 0.26
TRIM65-203ENST00000540812 PDCD7Q8N8D1 485 aaKnown RBP16.7■□□□□ 0.26
TRIM65-203ENST00000540812 OR8D1Q8WZ84 308 aa16.7■□□□□ 0.26
TRIM65-203ENST00000540812 LRIG1Q96JA1 1093 aa16.7■□□□□ 0.26
TRIM65-203ENST00000540812 SCUBE2Q9NQ36 999 aa16.7■□□□□ 0.26
TRIM65-203ENST00000540812 PPM1HQ9ULR3 514 aa16.7■□□□□ 0.26
TRIM65-203ENST00000540812 PCDHGC3Q9UN70 934 aa16.7■□□□□ 0.26
TRIM65-203ENST00000540812 ARID1BQ8NFD5 2236 aaPredicted RBP16.7■□□□□ 0.26
TRIM65-203ENST00000540812 BPTFQ12830 3046 aa16.7■□□□□ 0.26
TRIM65-203ENST00000540812 YKT6O15498 198 aa16.69■□□□□ 0.26
TRIM65-203ENST00000540812 PAGE1O75459 146 aa16.69■□□□□ 0.26
TRIM65-203ENST00000540812 DAB1O75553 588 aa16.69■□□□□ 0.26
TRIM65-203ENST00000540812 CNTN5O94779 1100 aa16.69■□□□□ 0.26
TRIM65-203ENST00000540812 PNMA6AP0CW24 399 aaPredicted RBP16.69■□□□□ 0.26
TRIM65-203ENST00000540812 PON1P27169 355 aa16.69■□□□□ 0.26
TRIM65-203ENST00000540812 RXRGP48443 463 aa16.69■□□□□ 0.26
TRIM65-203ENST00000540812 ACADVLP49748 655 aa16.69■□□□□ 0.26
TRIM65-203ENST00000540812 OXCT1P55809 520 aa16.69■□□□□ 0.26
TRIM65-203ENST00000540812 DLG2Q15700 870 aa16.69■□□□□ 0.26
TRIM65-203ENST00000540812 EXOC3L4Q17RC7 722 aa16.69■□□□□ 0.26
TRIM65-203ENST00000540812 PTPN20Q4JDL3 420 aa16.69■□□□□ 0.26
TRIM65-203ENST00000540812 SLC45A4Q5BKX6 768 aa16.69■□□□□ 0.26
TRIM65-203ENST00000540812 KANSL1Q7Z3B3 1105 aa16.69■□□□□ 0.26
TRIM65-203ENST00000540812 MFSD2AQ8NA29 543 aa16.69■□□□□ 0.26
TRIM65-203ENST00000540812 PIP4K2CQ8TBX8 421 aa16.69■□□□□ 0.26
TRIM65-203ENST00000540812 CRELD1Q96HD1 420 aa16.69■□□□□ 0.26
TRIM65-203ENST00000540812 FAM81BQ96LP2 452 aa16.69■□□□□ 0.26
TRIM65-203ENST00000540812 ERVMER34-1Q9H9K5 563 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms