RNA–Protein interactions for RNA: ENST00000540783.5

RAPGEF4-215, Transcript of Rap guanine nucleotide exchange factor 4, human

TSL 2 BASIC

Gene RAPGEF4, Length 3,974 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAPGEF4-215	ENST00000540783	MTHFR	P42898	656 aa		5.8	□□□□□ -1.48
RAPGEF4-215	ENST00000540783	TMED1	Q13445	227 aa		5.8	□□□□□ -1.48
RAPGEF4-215	ENST00000540783	MAP7	Q14244	749 aa		5.8	□□□□□ -1.48
RAPGEF4-215	ENST00000540783	PUS10	Q3MIT2	529 aa	Known RBP	5.8	□□□□□ -1.48
RAPGEF4-215	ENST00000540783	PLPP4	Q5VZY2	271 aa		5.8	□□□□□ -1.48
RAPGEF4-215	ENST00000540783	ACAD11	Q709F0	780 aa		5.8	□□□□□ -1.48
RAPGEF4-215	ENST00000540783	CRLF3	Q8IUI8	442 aa		5.8	□□□□□ -1.48
RAPGEF4-215	ENST00000540783	CEP70	Q8NHQ1	597 aa		5.8	□□□□□ -1.48
RAPGEF4-215	ENST00000540783	SLC35B2	Q8TB61	432 aa		5.8	□□□□□ -1.48
RAPGEF4-215	ENST00000540783	ZNF606	Q8WXB4	792 aa		5.8	□□□□□ -1.48
RAPGEF4-215	ENST00000540783	NCSTN	Q92542	709 aa		5.8	□□□□□ -1.48
RAPGEF4-215	ENST00000540783	HSPH1	Q92598	858 aa		5.8	□□□□□ -1.48
RAPGEF4-215	ENST00000540783	FAM149B1	Q96BN6	582 aa		5.8	□□□□□ -1.48
RAPGEF4-215	ENST00000540783	MFSD14A	Q96MC6	490 aa		5.8	□□□□□ -1.48
RAPGEF4-215	ENST00000540783	OLFM3	Q96PB7	478 aa		5.8	□□□□□ -1.48
RAPGEF4-215	ENST00000540783	HAPLN3	Q96S86	360 aa		5.8	□□□□□ -1.48
RAPGEF4-215	ENST00000540783	CCDC106	Q9BWC9	280 aa		5.8	□□□□□ -1.48
RAPGEF4-215	ENST00000540783	CALN1	Q9BXU9	219 aa		5.8	□□□□□ -1.48
RAPGEF4-215	ENST00000540783	GRIP2	Q9C0E4	1043 aa		5.8	□□□□□ -1.48
RAPGEF4-215	ENST00000540783	IGFLR1	Q9H665	355 aa		5.8	□□□□□ -1.48
RAPGEF4-215	ENST00000540783	SSU72	Q9NP77	194 aa	Known RBP	5.8	□□□□□ -1.48
RAPGEF4-215	ENST00000540783	THG1L	Q9NWX6	298 aa	Known RBP	5.8	□□□□□ -1.48
RAPGEF4-215	ENST00000540783	KCNK4	Q9NYG8	393 aa		5.8	□□□□□ -1.48
RAPGEF4-215	ENST00000540783	TRPM5	Q9NZQ8	1165 aa		5.8	□□□□□ -1.48
RAPGEF4-215	ENST00000540783	CNTN3	Q9P232	1028 aa		5.8	□□□□□ -1.48
RAPGEF4-215	ENST00000540783	APPL1	Q9UKG1	709 aa		5.8	□□□□□ -1.48
RAPGEF4-215	ENST00000540783	STAP1	Q9ULZ2	295 aa		5.8	□□□□□ -1.48
RAPGEF4-215	ENST00000540783	LZTS1	Q9Y250	596 aa		5.8	□□□□□ -1.48
RAPGEF4-215	ENST00000540783	HEMK1	Q9Y5R4	338 aa	Predicted RBP	5.8	□□□□□ -1.48
RAPGEF4-215	ENST00000540783	ITM2A	O43736	263 aa		5.8	□□□□□ -1.48
RAPGEF4-215	ENST00000540783	VNN1	O95497	513 aa		5.8	□□□□□ -1.48
RAPGEF4-215	ENST00000540783	ITGAV	P06756	1048 aa		5.8	□□□□□ -1.48
RAPGEF4-215	ENST00000540783	PABPC4L	P0CB38	370 aa	Known RBP	5.8	□□□□□ -1.48
RAPGEF4-215	ENST00000540783	SETSIP	P0DME0	302 aa		5.8	□□□□□ -1.48
RAPGEF4-215	ENST00000540783	CSH1	P0DML2	217 aa		5.8	□□□□□ -1.48
RAPGEF4-215	ENST00000540783	CSH2	P0DML3	217 aa		5.8	□□□□□ -1.48
RAPGEF4-215	ENST00000540783	UQCRB	P14927	111 aa		5.8	□□□□□ -1.48
RAPGEF4-215	ENST00000540783	CD1E	P15812	388 aa		5.8	□□□□□ -1.48
RAPGEF4-215	ENST00000540783	NCF2	P19878	526 aa	Predicted RBP	5.8	□□□□□ -1.48
RAPGEF4-215	ENST00000540783	ACO1	P21399	889 aa	Known RBP	5.8	□□□□□ -1.48
RAPGEF4-215	ENST00000540783	STIP1	P31948	543 aa	Known RBP	5.8	□□□□□ -1.48
RAPGEF4-215	ENST00000540783	BMP8B	P34820	402 aa		5.8	□□□□□ -1.48
RAPGEF4-215	ENST00000540783	RGS19	P49795	217 aa		5.8	□□□□□ -1.48
RAPGEF4-215	ENST00000540783	GALK1	P51570	392 aa		5.8	□□□□□ -1.48
RAPGEF4-215	ENST00000540783	MRPS5	P82675	430 aa	Known RBP	5.8	□□□□□ -1.48
RAPGEF4-215	ENST00000540783	FOLH1	Q04609	750 aa		5.8	□□□□□ -1.48
RAPGEF4-215	ENST00000540783	IFRD2	Q12894	506 aa	Predicted RBP	5.8	□□□□□ -1.48
RAPGEF4-215	ENST00000540783	ORC1	Q13415	861 aa		5.8	□□□□□ -1.48
RAPGEF4-215	ENST00000540783	CUL2	Q13617	745 aa		5.8	□□□□□ -1.48
RAPGEF4-215	ENST00000540783	CCNI	Q14094	377 aa		5.8	□□□□□ -1.48
RAPGEF4-215	ENST00000540783	MARCH8	Q5T0T0	291 aa		5.8	□□□□□ -1.48
RAPGEF4-215	ENST00000540783	SH2D5	Q6ZV89	423 aa		5.8	□□□□□ -1.48
RAPGEF4-215	ENST00000540783	RTL10	Q7L3V2	364 aa		5.8	□□□□□ -1.48
RAPGEF4-215	ENST00000540783	CHSY1	Q86X52	802 aa		5.8	□□□□□ -1.48
RAPGEF4-215	ENST00000540783	NDUFAF2	Q8N183	169 aa		5.8	□□□□□ -1.48
RAPGEF4-215	ENST00000540783	PDZD8	Q8NEN9	1154 aa		5.8	□□□□□ -1.48
RAPGEF4-215	ENST00000540783	SLC44A1	Q8WWI5	657 aa		5.8	□□□□□ -1.48
RAPGEF4-215	ENST00000540783	NKD2	Q969F2	451 aa	Predicted RBP	5.8	□□□□□ -1.48
RAPGEF4-215	ENST00000540783	DTNBP1	Q96EV8	351 aa		5.8	□□□□□ -1.48
RAPGEF4-215	ENST00000540783	TCF25	Q9BQ70	676 aa		5.8	□□□□□ -1.48
RAPGEF4-215	ENST00000540783	KLHL4	Q9C0H6	718 aa		5.8	□□□□□ -1.48
RAPGEF4-215	ENST00000540783	WWP1	Q9H0M0	922 aa		5.8	□□□□□ -1.48
RAPGEF4-215	ENST00000540783	FBXO44	Q9H4M3	255 aa		5.8	□□□□□ -1.48
RAPGEF4-215	ENST00000540783	NSUN3	Q9H649	340 aa	Known RBP	5.8	□□□□□ -1.48
RAPGEF4-215	ENST00000540783	SLC17A6	Q9P2U8	582 aa		5.8	□□□□□ -1.48
RAPGEF4-215	ENST00000540783	CPSF3	Q9UKF6	684 aa	Known RBP	5.8	□□□□□ -1.48
RAPGEF4-215	ENST00000540783	SLC8A2	Q9UPR5	921 aa		5.8	□□□□□ -1.48
RAPGEF4-215	ENST00000540783	SCIN	Q9Y6U3	715 aa		5.8	□□□□□ -1.48
RAPGEF4-215	ENST00000540783	C15orf38-AP3S2	A0A0A6YYH1	394 aa		5.8	□□□□□ -1.48
RAPGEF4-215	ENST00000540783	TRIM43B	A6NCK2	446 aa		5.8	□□□□□ -1.48
RAPGEF4-215	ENST00000540783	RBP3	P10745	1247 aa		5.8	□□□□□ -1.48
RAPGEF4-215	ENST00000540783	VDR	P11473	427 aa		5.8	□□□□□ -1.48
RAPGEF4-215	ENST00000540783	PSMA2	P25787	234 aa		5.8	□□□□□ -1.48
RAPGEF4-215	ENST00000540783	TPP2	P29144	1249 aa	Predicted RBP	5.8	□□□□□ -1.48
RAPGEF4-215	ENST00000540783	RFC1	P35251	1148 aa	Predicted RBP	5.8	□□□□□ -1.48
RAPGEF4-215	ENST00000540783	CPOX	P36551	454 aa		5.8	□□□□□ -1.48
RAPGEF4-215	ENST00000540783	EIF3E	P60228	445 aa	Known RBP	5.8	□□□□□ -1.48
RAPGEF4-215	ENST00000540783	MMRN1	Q13201	1228 aa		5.8	□□□□□ -1.48
RAPGEF4-215	ENST00000540783	DPYSL3	Q14195	570 aa		5.8	□□□□□ -1.48
RAPGEF4-215	ENST00000540783	ACAP1	Q15027	740 aa		5.8	□□□□□ -1.48
RAPGEF4-215	ENST00000540783	DNAL1	Q4LDG9	190 aa		5.8	□□□□□ -1.48
RAPGEF4-215	ENST00000540783	TMCO4	Q5TGY1	634 aa		5.8	□□□□□ -1.48
RAPGEF4-215	ENST00000540783	ARPIN	Q7Z6K5	226 aa		5.8	□□□□□ -1.48
RAPGEF4-215	ENST00000540783	GPR65	Q8IYL9	337 aa		5.8	□□□□□ -1.48
RAPGEF4-215	ENST00000540783	DEFB107A	Q8IZN7	70 aa		5.8	□□□□□ -1.48
RAPGEF4-215	ENST00000540783	COLGALT1	Q8NBJ5	622 aa		5.8	□□□□□ -1.48
RAPGEF4-215	ENST00000540783	OR5B17	Q8NGF7	314 aa		5.8	□□□□□ -1.48
RAPGEF4-215	ENST00000540783	JOSD2	Q8TAC2	188 aa		5.8	□□□□□ -1.48
RAPGEF4-215	ENST00000540783	AGR3	Q8TD06	166 aa		5.8	□□□□□ -1.48
RAPGEF4-215	ENST00000540783	TRIM43	Q96BQ3	446 aa	Predicted RBP	5.8	□□□□□ -1.48
RAPGEF4-215	ENST00000540783	FAM210A	Q96ND0	272 aa		5.8	□□□□□ -1.48
RAPGEF4-215	ENST00000540783	NECTIN4	Q96NY8	510 aa		5.8	□□□□□ -1.48
RAPGEF4-215	ENST00000540783	EIF2A	Q9BY44	585 aa	Known RBP	5.8	□□□□□ -1.48
RAPGEF4-215	ENST00000540783	SMYD2	Q9NRG4	433 aa		5.8	□□□□□ -1.48
RAPGEF4-215	ENST00000540783	ABI2	Q9NYB9	513 aa	Predicted RBP	5.8	□□□□□ -1.48
RAPGEF4-215	ENST00000540783	SOX13	Q9UN79	622 aa		5.8	□□□□□ -1.48
RAPGEF4-215	ENST00000540783	DNAJC16	Q9Y2G8	782 aa		5.8	□□□□□ -1.48
RAPGEF4-215	ENST00000540783	PLLP	Q9Y342	182 aa		5.8	□□□□□ -1.48
RAPGEF4-215	ENST00000540783	HES2	Q9Y543	173 aa		5.8	□□□□□ -1.48
RAPGEF4-215	ENST00000540783	ZNF236	Q9UL36	1845 aa		5.79	□□□□□ -1.48

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