RNA–Protein interactions for RNA: ENST00000540700.1

UBC-208, Transcript of ubiquitin C, humanhuman

TSL 2

Gene UBC, Length 627 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBC-208ENST00000540700 MFHAS1Q9Y4C4 1052 aa17.18■□□□□ 0.34
UBC-208ENST00000540700 RALGAPA1Q6GYQ0 2036 aa17.18■□□□□ 0.34
UBC-208ENST00000540700 KIAA1549LQ6ZVL6 1849 aa17.17■□□□□ 0.34
UBC-208ENST00000540700 C3orf70A6NLC5 250 aaPredicted RBP17.17■□□□□ 0.34
UBC-208ENST00000540700 TM4SF5O14894 197 aa17.17■□□□□ 0.34
UBC-208ENST00000540700 PAPSS2O95340 614 aaPredicted RBP17.17■□□□□ 0.34
UBC-208ENST00000540700 CHRM1P11229 460 aaPredicted RBP17.17■□□□□ 0.34
UBC-208ENST00000540700 HLA-FP30511 346 aa17.17■□□□□ 0.34
UBC-208ENST00000540700 NUMBP49757 651 aa17.17■□□□□ 0.34
UBC-208ENST00000540700 GALK1P51570 392 aa17.17■□□□□ 0.34
UBC-208ENST00000540700 LIMK1P53667 647 aa17.17■□□□□ 0.34
UBC-208ENST00000540700 MTA1Q13330 715 aa17.17■□□□□ 0.34
UBC-208ENST00000540700 DPYSL3Q14195 570 aa17.17■□□□□ 0.34
UBC-208ENST00000540700 PON2Q15165 354 aa17.17■□□□□ 0.34
UBC-208ENST00000540700 HADHQ16836 314 aaKnown RBP17.17■□□□□ 0.34
UBC-208ENST00000540700 PPP6R3Q5H9R7 873 aaPredicted RBP17.17■□□□□ 0.34
UBC-208ENST00000540700 DGKKQ5KSL6 1271 aa17.17■□□□□ 0.34
UBC-208ENST00000540700 MPP7Q5T2T1 576 aa17.17■□□□□ 0.34
UBC-208ENST00000540700 POLNQ7Z5Q5 900 aa17.17■□□□□ 0.34
UBC-208ENST00000540700 TFAP2DQ7Z6R9 452 aa17.17■□□□□ 0.34
UBC-208ENST00000540700 WDR5BQ86VZ2 330 aa17.17■□□□□ 0.34
UBC-208ENST00000540700 TBC1D31Q96DN5 1066 aa17.17■□□□□ 0.34
UBC-208ENST00000540700 MSANTD3Q96H12 275 aa17.17■□□□□ 0.34
UBC-208ENST00000540700 DNAJC17Q9NVM6 304 aaKnown RBP17.17■□□□□ 0.34
UBC-208ENST00000540700 PPARGC1AQ9UBK2 798 aaKnown RBP17.17■□□□□ 0.34
UBC-208ENST00000540700 DDX3YO15523 660 aaKnown RBP17.16■□□□□ 0.34
UBC-208ENST00000540700 LUC7L3O95232 432 aaKnown RBP17.16■□□□□ 0.34
UBC-208ENST00000540700 CYBBP04839 570 aa17.16■□□□□ 0.34
UBC-208ENST00000540700 ZNF806P0C7X5 589 aa17.16■□□□□ 0.34
UBC-208ENST00000540700 CD70P32970 193 aa17.16■□□□□ 0.34
UBC-208ENST00000540700 CTNNA1P35221 906 aaKnown RBP17.16■□□□□ 0.34
UBC-208ENST00000540700 CDH6P55285 790 aa17.16■□□□□ 0.34
UBC-208ENST00000540700 KDSRQ06136 332 aa17.16■□□□□ 0.34
UBC-208ENST00000540700 LMAN2Q12907 356 aa17.16■□□□□ 0.34
UBC-208ENST00000540700 NR1H3Q13133 447 aa17.16■□□□□ 0.34
UBC-208ENST00000540700 DPYSQ14117 519 aa17.16■□□□□ 0.34
UBC-208ENST00000540700 RABGAP1LQ5R372 815 aa17.16■□□□□ 0.34
UBC-208ENST00000540700 LRRC38Q5VT99 294 aa17.16■□□□□ 0.34
UBC-208ENST00000540700 TMEM215Q68D42 235 aa17.16■□□□□ 0.34
UBC-208ENST00000540700 FSTL4Q6MZW2 842 aa17.16■□□□□ 0.34
UBC-208ENST00000540700 RWDD4Q6NW29 188 aaKnown RBP17.16■□□□□ 0.34
UBC-208ENST00000540700 C1orf228Q6PIY5 440 aa17.16■□□□□ 0.34
UBC-208ENST00000540700 RHOT1Q8IXI2 618 aa17.16■□□□□ 0.34
UBC-208ENST00000540700 CARNMT1Q8N4J0 409 aa17.16■□□□□ 0.34
UBC-208ENST00000540700 NETO2Q8NC67 525 aa17.16■□□□□ 0.34
UBC-208ENST00000540700 KIAA1524Q8TCG1 905 aa17.16■□□□□ 0.34
UBC-208ENST00000540700 ALG3Q92685 438 aa17.16■□□□□ 0.34
UBC-208ENST00000540700 CALR3Q96L12 384 aaKnown RBP17.16■□□□□ 0.34
UBC-208ENST00000540700 CSPG4P5Q96PW8 444 aa17.16■□□□□ 0.34
UBC-208ENST00000540700 ZYG11BQ9C0D3 744 aa17.16■□□□□ 0.34
UBC-208ENST00000540700 ETNK2Q9NVF9 386 aa17.16■□□□□ 0.34
UBC-208ENST00000540700 HCN2Q9UL51 889 aa17.16■□□□□ 0.34
UBC-208ENST00000540700 LAMA1P25391 3075 aa17.15■□□□□ 0.34
UBC-208ENST00000540700 SPEGQ15772 3267 aa17.15■□□□□ 0.34
UBC-208ENST00000540700 A0A1B0GVM2 712 aa17.15■□□□□ 0.34
UBC-208ENST00000540700 TCAF2A6NFQ2 919 aa17.15■□□□□ 0.34
UBC-208ENST00000540700 C1QTNF9BB2RNN3 333 aa17.15■□□□□ 0.34
UBC-208ENST00000540700 PRRT4C9JH25 899 aa17.15■□□□□ 0.34
UBC-208ENST00000540700 EEF2KO00418 725 aaKnown RBP17.15■□□□□ 0.34
UBC-208ENST00000540700 PSTPIP1O43586 416 aa17.15■□□□□ 0.34
UBC-208ENST00000540700 RPP40O75818 363 aaKnown RBP17.15■□□□□ 0.34
UBC-208ENST00000540700 KCNK5O95279 499 aa17.15■□□□□ 0.34
UBC-208ENST00000540700 PROS1P07225 676 aa17.15■□□□□ 0.34
UBC-208ENST00000540700 C1QTNF9P0C862 333 aa17.15■□□□□ 0.34
UBC-208ENST00000540700 CTNNA2P26232 953 aa17.15■□□□□ 0.34
UBC-208ENST00000540700 PEX5P50542 639 aa17.15■□□□□ 0.34
UBC-208ENST00000540700 CDH4P55283 916 aa17.15■□□□□ 0.34
UBC-208ENST00000540700 IFI16Q16666 785 aaKnown RBP17.15■□□□□ 0.34
UBC-208ENST00000540700 GEN1Q17RS7 908 aa17.15■□□□□ 0.34
UBC-208ENST00000540700 PSAPL1Q6NUJ1 521 aa17.15■□□□□ 0.34
UBC-208ENST00000540700 LRRC31Q6UY01 552 aa17.15■□□□□ 0.34
UBC-208ENST00000540700 RFX8Q6ZV50 586 aa17.15■□□□□ 0.34
UBC-208ENST00000540700 CHST9Q7L1S5 443 aa17.15■□□□□ 0.34
UBC-208ENST00000540700 KBTBD6Q86V97 674 aa17.15■□□□□ 0.34
UBC-208ENST00000540700 RALGPS2Q86X27 583 aaPredicted RBP17.15■□□□□ 0.34
UBC-208ENST00000540700 EPAS1Q99814 870 aa17.15■□□□□ 0.34
UBC-208ENST00000540700 KLC2Q9H0B6 622 aa17.15■□□□□ 0.34
UBC-208ENST00000540700 NOL6Q9H6R4 1146 aaKnown RBP17.15■□□□□ 0.34
UBC-208ENST00000540700 INTS6Q9UL03 887 aaKnown RBP17.15■□□□□ 0.34
UBC-208ENST00000540700 ASPMQ8IZT6 3477 aa17.15■□□□□ 0.34
UBC-208ENST00000540700 ZSCAN12O43309 604 aa17.14■□□□□ 0.33
UBC-208ENST00000540700 EPN2O95208 641 aa17.14■□□□□ 0.33
UBC-208ENST00000540700 EGFP01133 1207 aa17.14■□□□□ 0.33
UBC-208ENST00000540700 KRT1P04264 644 aa17.14■□□□□ 0.33
UBC-208ENST00000540700 KRT7P08729 469 aa17.14■□□□□ 0.33
UBC-208ENST00000540700 HOXB3P14651 431 aaPredicted RBP17.14■□□□□ 0.33
UBC-208ENST00000540700 RHOQP17081 205 aa17.14■□□□□ 0.33
UBC-208ENST00000540700 AMPD1P23109 780 aa17.14■□□□□ 0.33
UBC-208ENST00000540700 KDELR1P24390 212 aa17.14■□□□□ 0.33
UBC-208ENST00000540700 MZF1P28698 734 aaPredicted RBP17.14■□□□□ 0.33
UBC-208ENST00000540700 EPHB2P29323 1055 aa17.14■□□□□ 0.33
UBC-208ENST00000540700 EIF2DP41214 584 aaKnown RBP17.14■□□□□ 0.33
UBC-208ENST00000540700 TPI1P60174 286 aa17.14■□□□□ 0.33
UBC-208ENST00000540700 TMEM196Q5HYL7 178 aa17.14■□□□□ 0.33
UBC-208ENST00000540700 ACBD5Q5T8D3 534 aaPredicted RBP17.14■□□□□ 0.33
UBC-208ENST00000540700 TTC39BQ5VTQ0 682 aaPredicted RBP17.14■□□□□ 0.33
UBC-208ENST00000540700 DCAF12L1Q5VU92 463 aa17.14■□□□□ 0.33
UBC-208ENST00000540700 AADACL2Q6P093 401 aa17.14■□□□□ 0.33
UBC-208ENST00000540700 MFSD7Q6UXD7 560 aa17.14■□□□□ 0.33
UBC-208ENST00000540700 PEX26Q7Z412 305 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms