RNA–Protein interactions for RNA: ENST00000540408.5

COPS7A-211, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 2

Gene COPS7A, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-211ENST00000540408 KNTC1P50748 2209 aa12.86□□□□□ -0.35
COPS7A-211ENST00000540408 A0A1B0GVM2 712 aa12.86□□□□□ -0.35
COPS7A-211ENST00000540408 TCAF2A6NFQ2 919 aa12.86□□□□□ -0.35
COPS7A-211ENST00000540408 PRAMEF26H0Y7S4 382 aa12.86□□□□□ -0.35
COPS7A-211ENST00000540408 ATXN7O15265 892 aaPredicted RBP12.86□□□□□ -0.35
COPS7A-211ENST00000540408 PLRG1O43660 514 aaKnown RBP12.86□□□□□ -0.35
COPS7A-211ENST00000540408 TLX3O43711 291 aaPredicted RBP12.86□□□□□ -0.35
COPS7A-211ENST00000540408 RNGTTO60942 597 aaKnown RBP12.86□□□□□ -0.35
COPS7A-211ENST00000540408 KRT5P13647 590 aa12.86□□□□□ -0.35
COPS7A-211ENST00000540408 ACP1P24666 158 aa12.86□□□□□ -0.35
COPS7A-211ENST00000540408 DRD3P35462 400 aa12.86□□□□□ -0.35
COPS7A-211ENST00000540408 RPL34P49207 117 aaKnown RBP12.86□□□□□ -0.35
COPS7A-211ENST00000540408 PLK1P53350 603 aa12.86□□□□□ -0.35
COPS7A-211ENST00000540408 PPP2CBP62714 309 aa12.86□□□□□ -0.35
COPS7A-211ENST00000540408 PPP2CAP67775 309 aa12.86□□□□□ -0.35
COPS7A-211ENST00000540408 DAB2P98082 770 aa12.86□□□□□ -0.35
COPS7A-211ENST00000540408 MTA1Q13330 715 aa12.86□□□□□ -0.35
COPS7A-211ENST00000540408 TRIM69Q86WT6 500 aa12.86□□□□□ -0.35
COPS7A-211ENST00000540408 SPATS2Q86XZ4 545 aaKnown RBP12.86□□□□□ -0.35
COPS7A-211ENST00000540408 CCAR2Q8N163 923 aaKnown RBP12.86□□□□□ -0.35
COPS7A-211ENST00000540408 EHBP1Q8NDI1 1231 aa12.86□□□□□ -0.35
COPS7A-211ENST00000540408 SNIP1Q8TAD8 396 aaKnown RBP12.86□□□□□ -0.35
COPS7A-211ENST00000540408 ERCC4Q92889 916 aaPredicted RBP12.86□□□□□ -0.35
COPS7A-211ENST00000540408 KAT5Q92993 513 aa12.86□□□□□ -0.35
COPS7A-211ENST00000540408 KLHDC7BQ96G42 594 aa12.86□□□□□ -0.35
COPS7A-211ENST00000540408 THAP9Q9H5L6 903 aa12.86□□□□□ -0.35
COPS7A-211ENST00000540408 ARHGAP20Q9P2F6 1191 aa12.86□□□□□ -0.35
COPS7A-211ENST00000540408 XPO7Q9UIA9 1087 aaKnown RBP12.86□□□□□ -0.35
COPS7A-211ENST00000540408 CELSR3Q9NYQ7 3312 aa12.85□□□□□ -0.35
COPS7A-211ENST00000540408 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.85□□□□□ -0.35
COPS7A-211ENST00000540408 TEX51A0A1B0GUA7 166 aa12.85□□□□□ -0.35
COPS7A-211ENST00000540408 CAPN8A6NHC0 703 aa12.85□□□□□ -0.35
COPS7A-211ENST00000540408 C10orf142B7Z368 130 aa12.85□□□□□ -0.35
COPS7A-211ENST00000540408 ALOX15BO15296 676 aa12.85□□□□□ -0.35
COPS7A-211ENST00000540408 RTN2O75298 545 aa12.85□□□□□ -0.35
COPS7A-211ENST00000540408 CALCAP01258 141 aa12.85□□□□□ -0.35
COPS7A-211ENST00000540408 CCR1P32246 355 aa12.85□□□□□ -0.35
COPS7A-211ENST00000540408 VASPP50552 380 aaPredicted RBP12.85□□□□□ -0.35
COPS7A-211ENST00000540408 CDK17Q00537 523 aa12.85□□□□□ -0.35
COPS7A-211ENST00000540408 ZNF177Q13360 481 aaPredicted RBP12.85□□□□□ -0.35
COPS7A-211ENST00000540408 ZNF211Q13398 564 aaPredicted RBP12.85□□□□□ -0.35
COPS7A-211ENST00000540408 MEA1Q16626 185 aa12.85□□□□□ -0.35
COPS7A-211ENST00000540408 GPR155Q7Z3F1 870 aa12.85□□□□□ -0.35
COPS7A-211ENST00000540408 FMR1NBQ8N0W7 255 aaPredicted RBP12.85□□□□□ -0.35
COPS7A-211ENST00000540408 FRS2Q8WU20 508 aa12.85□□□□□ -0.35
COPS7A-211ENST00000540408 RFFLQ8WZ73 363 aa12.85□□□□□ -0.35
COPS7A-211ENST00000540408 CCDC114Q96M63 670 aa12.85□□□□□ -0.35
COPS7A-211ENST00000540408 RPRD1AQ96P16 312 aaPredicted RBP12.85□□□□□ -0.35
COPS7A-211ENST00000540408 SLC4A5Q9BY07 1137 aa12.85□□□□□ -0.35
COPS7A-211ENST00000540408 FAM204AQ9H8W3 233 aa12.85□□□□□ -0.35
COPS7A-211ENST00000540408 GDPD2Q9HCC8 539 aa12.85□□□□□ -0.35
COPS7A-211ENST00000540408 PREBQ9HCU5 417 aa12.85□□□□□ -0.35
COPS7A-211ENST00000540408 IGSF10Q6WRI0 2623 aa12.85□□□□□ -0.35
COPS7A-211ENST00000540408 ASXL3Q9C0F0 2248 aa12.84□□□□□ -0.35
COPS7A-211ENST00000540408 LOC400499M0QZD8 3231 aa12.84□□□□□ -0.35
COPS7A-211ENST00000540408 MCF2LO15068 1137 aa12.84□□□□□ -0.35
COPS7A-211ENST00000540408 ATP9BO43861 1147 aa12.84□□□□□ -0.35
COPS7A-211ENST00000540408 BRINP1O60477 761 aa12.84□□□□□ -0.35
COPS7A-211ENST00000540408 SDC3O75056 442 aa12.84□□□□□ -0.35
COPS7A-211ENST00000540408 LETM1O95202 739 aaPredicted RBP12.84□□□□□ -0.35
COPS7A-211ENST00000540408 GNA14O95837 355 aa12.84□□□□□ -0.35
COPS7A-211ENST00000540408 PRB1P04280 392 aa12.84□□□□□ -0.35
COPS7A-211ENST00000540408 ALPPL2P10696 532 aa12.84□□□□□ -0.35
COPS7A-211ENST00000540408 VAV1P15498 845 aa12.84□□□□□ -0.35
COPS7A-211ENST00000540408 NUMBP49757 651 aa12.84□□□□□ -0.35
COPS7A-211ENST00000540408 INSM1Q01101 510 aaPredicted RBP12.84□□□□□ -0.35
COPS7A-211ENST00000540408 CCDC173Q0VFZ6 552 aa12.84□□□□□ -0.35
COPS7A-211ENST00000540408 CNTN1Q12860 1018 aa12.84□□□□□ -0.35
COPS7A-211ENST00000540408 DLG2Q15700 870 aa12.84□□□□□ -0.35
COPS7A-211ENST00000540408 BROXQ5VW32 411 aa12.84□□□□□ -0.35
COPS7A-211ENST00000540408 NEK5Q6P3R8 708 aa12.84□□□□□ -0.35
COPS7A-211ENST00000540408 DENND1BQ6P3S1 775 aa12.84□□□□□ -0.35
COPS7A-211ENST00000540408 KDM7AQ6ZMT4 941 aa12.84□□□□□ -0.35
COPS7A-211ENST00000540408 ZNF605Q86T29 641 aa12.84□□□□□ -0.35
COPS7A-211ENST00000540408 TMEM110Q86TL2 294 aa12.84□□□□□ -0.35
COPS7A-211ENST00000540408 ARHGEF19Q8IW93 802 aa12.84□□□□□ -0.35
COPS7A-211ENST00000540408 LSMEM2Q8N112 164 aa12.84□□□□□ -0.35
COPS7A-211ENST00000540408 LMO3Q8TAP4 145 aa12.84□□□□□ -0.35
COPS7A-211ENST00000540408 FAM131CQ96AQ9 280 aa12.84□□□□□ -0.35
COPS7A-211ENST00000540408 DYRK4Q9NR20 520 aa12.84□□□□□ -0.35
COPS7A-211ENST00000540408 EVA1BQ9NVM1 165 aa12.84□□□□□ -0.35
COPS7A-211ENST00000540408 DDIT4Q9NX09 232 aa12.84□□□□□ -0.35
COPS7A-211ENST00000540408 VPS28Q9UK41 221 aa12.84□□□□□ -0.35
COPS7A-211ENST00000540408 SARDHQ9UL12 918 aa12.84□□□□□ -0.35
COPS7A-211ENST00000540408 PPM1HQ9ULR3 514 aa12.84□□□□□ -0.35
COPS7A-211ENST00000540408 RAI2Q9Y5P3 530 aa12.84□□□□□ -0.35
COPS7A-211ENST00000540408 SYNJ2BP-COX16A0A087WUM0 186 aa12.83□□□□□ -0.36
COPS7A-211ENST00000540408 BICDL2A1A5D9 508 aa12.83□□□□□ -0.36
COPS7A-211ENST00000540408 NEMP2A6NFY4 417 aa12.83□□□□□ -0.36
COPS7A-211ENST00000540408 E5RJQ4 531 aa12.83□□□□□ -0.36
COPS7A-211ENST00000540408 SLC31A1O15431 190 aa12.83□□□□□ -0.36
COPS7A-211ENST00000540408 THAP12O43422 761 aa12.83□□□□□ -0.36
COPS7A-211ENST00000540408 SIGLEC6O43699 453 aa12.83□□□□□ -0.36
COPS7A-211ENST00000540408 BNIP3LO60238 219 aa12.83□□□□□ -0.36
COPS7A-211ENST00000540408 MT-CO3P00414 261 aa12.83□□□□□ -0.36
COPS7A-211ENST00000540408 IGLV3-25P01717 112 aa12.83□□□□□ -0.36
COPS7A-211ENST00000540408 GLI1P08151 1106 aa12.83□□□□□ -0.36
COPS7A-211ENST00000540408 THEGLP0DJG4 465 aa12.83□□□□□ -0.36
COPS7A-211ENST00000540408 SNX16P57768 344 aa12.83□□□□□ -0.36
COPS7A-211ENST00000540408 KRT83P78385 493 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms