RNA–Protein interactions for RNA: ENST00000540216.5

CCDC130-202, Transcript of coiled-coil domain containing 130, humanhuman

TSL 2

Gene CCDC130, Length 995 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC130-202ENST00000540216 RNASEH1O60930 286 aaKnown RBP13.74□□□□□ -0.21
CCDC130-202ENST00000540216 OXTRP30559 389 aa13.74□□□□□ -0.21
CCDC130-202ENST00000540216 LMNB2Q03252 620 aa13.74□□□□□ -0.21
CCDC130-202ENST00000540216 ZNF252P-AS1Q0IIN9 211 aa13.74□□□□□ -0.21
CCDC130-202ENST00000540216 SFSWAPQ12872 951 aaKnown RBP13.74□□□□□ -0.21
CCDC130-202ENST00000540216 CSRP2Q16527 193 aa13.74□□□□□ -0.21
CCDC130-202ENST00000540216 SLC18A3Q16572 532 aa13.74□□□□□ -0.21
CCDC130-202ENST00000540216 TTC31Q49AM3 519 aaPredicted RBP13.74□□□□□ -0.21
CCDC130-202ENST00000540216 CCDC122Q5T0U0 273 aa13.74□□□□□ -0.21
CCDC130-202ENST00000540216 RWDD4Q6NW29 188 aaKnown RBP13.74□□□□□ -0.21
CCDC130-202ENST00000540216 DNAAF5Q86Y56 855 aa13.74□□□□□ -0.21
CCDC130-202ENST00000540216 PSTKQ8IV42 348 aaKnown RBP13.74□□□□□ -0.21
CCDC130-202ENST00000540216 ZNF366Q8N895 744 aa13.74□□□□□ -0.21
CCDC130-202ENST00000540216 EPAS1Q99814 870 aa13.74□□□□□ -0.21
CCDC130-202ENST00000540216 THAP2Q9H0W7 228 aa13.74□□□□□ -0.21
CCDC130-202ENST00000540216 SLC6A17Q9H1V8 727 aa13.74□□□□□ -0.21
CCDC130-202ENST00000540216 RSPH9Q9H1X1 276 aaPredicted RBP13.74□□□□□ -0.21
CCDC130-202ENST00000540216 DEF6Q9H4E7 631 aa13.74□□□□□ -0.21
CCDC130-202ENST00000540216 MYO1AQ9UBC5 1043 aa13.74□□□□□ -0.21
CCDC130-202ENST00000540216 SLCO3A1Q9UIG8 710 aa13.74□□□□□ -0.21
CCDC130-202ENST00000540216 CYP8B1Q9UNU6 501 aa13.74□□□□□ -0.21
CCDC130-202ENST00000540216 NEU3Q9UQ49 428 aa13.74□□□□□ -0.21
CCDC130-202ENST00000540216 HS3ST2Q9Y278 367 aa13.74□□□□□ -0.21
CCDC130-202ENST00000540216 BCLAF3A2AJT9 711 aaKnown RBP13.73□□□□□ -0.21
CCDC130-202ENST00000540216 TTC34A8MYJ7 566 aa13.73□□□□□ -0.21
CCDC130-202ENST00000540216 AKR1B15C9JRZ8 316 aaPredicted RBP13.73□□□□□ -0.21
CCDC130-202ENST00000540216 FAM72CH0Y354 149 aa13.73□□□□□ -0.21
CCDC130-202ENST00000540216 SIN3BO75182 1162 aa13.73□□□□□ -0.21
CCDC130-202ENST00000540216 NDUFS2O75306 463 aa13.73□□□□□ -0.21
CCDC130-202ENST00000540216 CYP1A2P05177 515 aa13.73□□□□□ -0.21
CCDC130-202ENST00000540216 CD6P30203 668 aa13.73□□□□□ -0.21
CCDC130-202ENST00000540216 PCK1P35558 622 aa13.73□□□□□ -0.21
CCDC130-202ENST00000540216 MPLP40238 635 aa13.73□□□□□ -0.21
CCDC130-202ENST00000540216 DHPSP49366 369 aaPredicted RBP13.73□□□□□ -0.21
CCDC130-202ENST00000540216 STK19P49842 368 aaPredicted RBP13.73□□□□□ -0.21
CCDC130-202ENST00000540216 TPMTP51580 245 aa13.73□□□□□ -0.21
CCDC130-202ENST00000540216 CLCN6P51797 869 aa13.73□□□□□ -0.21
CCDC130-202ENST00000540216 ZNF135P52742 658 aaPredicted RBP13.73□□□□□ -0.21
CCDC130-202ENST00000540216 RPS14P62263 151 aaKnown RBP13.73□□□□□ -0.21
CCDC130-202ENST00000540216 RPL6Q02878 288 aaKnown RBP13.73□□□□□ -0.21
CCDC130-202ENST00000540216 GNA12Q03113 381 aa13.73□□□□□ -0.21
CCDC130-202ENST00000540216 SPEM2Q0P670 501 aa13.73□□□□□ -0.21
CCDC130-202ENST00000540216 TBX2Q13207 712 aaPredicted RBP13.73□□□□□ -0.21
CCDC130-202ENST00000540216 SEMA3BQ13214 749 aa13.73□□□□□ -0.21
CCDC130-202ENST00000540216 PIGHQ14442 188 aaPredicted RBP13.73□□□□□ -0.21
CCDC130-202ENST00000540216 ELAVL3Q14576 367 aaKnown RBP13.73□□□□□ -0.21
CCDC130-202ENST00000540216 C9orf64Q5T6V5 341 aa13.73□□□□□ -0.21
CCDC130-202ENST00000540216 FAM72AQ5TYM5 149 aa13.73□□□□□ -0.21
CCDC130-202ENST00000540216 LYSMD4Q5XG99 296 aa13.73□□□□□ -0.21
CCDC130-202ENST00000540216 FAM72DQ6L9T8 149 aa13.73□□□□□ -0.21
CCDC130-202ENST00000540216 RETSATQ6NUM9 610 aa13.73□□□□□ -0.21
CCDC130-202ENST00000540216 CYP2U1Q7Z449 544 aa13.73□□□□□ -0.21
CCDC130-202ENST00000540216 NLRP14Q86W24 1093 aa13.73□□□□□ -0.21
CCDC130-202ENST00000540216 FAM72BQ86X60 149 aa13.73□□□□□ -0.21
CCDC130-202ENST00000540216 RPL10LQ96L21 214 aaKnown RBP13.73□□□□□ -0.21
CCDC130-202ENST00000540216 PSMB7Q99436 277 aa13.73□□□□□ -0.21
CCDC130-202ENST00000540216 ANP32EQ9BTT0 268 aa13.73□□□□□ -0.21
CCDC130-202ENST00000540216 PCED1AQ9H1Q7 454 aa13.73□□□□□ -0.21
CCDC130-202ENST00000540216 VPS45Q9NRW7 570 aa13.73□□□□□ -0.21
CCDC130-202ENST00000540216 SEMA4GQ9NTN9 838 aa13.73□□□□□ -0.21
CCDC130-202ENST00000540216 DONSONQ9NYP3 566 aa13.73□□□□□ -0.21
CCDC130-202ENST00000540216 LCMT1Q9UIC8 334 aa13.73□□□□□ -0.21
CCDC130-202ENST00000540216 VPS51Q9UID3 782 aa13.73□□□□□ -0.21
CCDC130-202ENST00000540216 USP18Q9UMW8 372 aa13.73□□□□□ -0.21
CCDC130-202ENST00000540216 ABCA7Q8IZY2 2146 aa13.73□□□□□ -0.21
CCDC130-202ENST00000540216 WDR87Q6ZQQ6 2873 aa13.73□□□□□ -0.21
CCDC130-202ENST00000540216 THADAQ6YHU6 1953 aa13.72□□□□□ -0.21
CCDC130-202ENST00000540216 A0A0D9SEW6 157 aa13.72□□□□□ -0.21
CCDC130-202ENST00000540216 ALOX15BO15296 676 aa13.72□□□□□ -0.21
CCDC130-202ENST00000540216 FGF10O15520 208 aaPredicted RBP13.72□□□□□ -0.21
CCDC130-202ENST00000540216 AKR1B10O60218 316 aa13.72□□□□□ -0.21
CCDC130-202ENST00000540216 PRPSAP2O60256 369 aa13.72□□□□□ -0.21
CCDC130-202ENST00000540216 DNTTP04053 509 aa13.72□□□□□ -0.21
CCDC130-202ENST00000540216 ZNF806P0C7X5 589 aa13.72□□□□□ -0.21
CCDC130-202ENST00000540216 TGM1P22735 817 aa13.72□□□□□ -0.21
CCDC130-202ENST00000540216 EPHB2P29323 1055 aa13.72□□□□□ -0.21
CCDC130-202ENST00000540216 HOXD12P35452 270 aa13.72□□□□□ -0.21
CCDC130-202ENST00000540216 GALCP54803 685 aa13.72□□□□□ -0.21
CCDC130-202ENST00000540216 ADKP55263 362 aaKnown RBP13.72□□□□□ -0.21
CCDC130-202ENST00000540216 GEMIN4P57678 1058 aaKnown RBP13.72□□□□□ -0.21
CCDC130-202ENST00000540216 CREB5Q02930 508 aa13.72□□□□□ -0.21
CCDC130-202ENST00000540216 SLC20A2Q08357 652 aa13.72□□□□□ -0.21
CCDC130-202ENST00000540216 ASTE1Q2TB18 679 aaPredicted RBP13.72□□□□□ -0.21
CCDC130-202ENST00000540216 PLA2G2CQ5R387 149 aa13.72□□□□□ -0.21
CCDC130-202ENST00000540216 USP30Q70CQ3 517 aa13.72□□□□□ -0.21
CCDC130-202ENST00000540216 DSG4Q86SJ6 1040 aa13.72□□□□□ -0.21
CCDC130-202ENST00000540216 KIAA2013Q8IYS2 634 aa13.72□□□□□ -0.21
CCDC130-202ENST00000540216 SH2D3CQ8N5H7 860 aa13.72□□□□□ -0.21
CCDC130-202ENST00000540216 ARFGAP1Q8N6T3 406 aa13.72□□□□□ -0.21
CCDC130-202ENST00000540216 FRMD1Q8N878 549 aa13.72□□□□□ -0.21
CCDC130-202ENST00000540216 NIPA2Q8N8Q9 360 aa13.72□□□□□ -0.21
CCDC130-202ENST00000540216 RTL3Q8N8U3 475 aaKnown RBP13.72□□□□□ -0.21
CCDC130-202ENST00000540216 FRS2Q8WU20 508 aa13.72□□□□□ -0.21
CCDC130-202ENST00000540216 CTNNBL1Q8WYA6 563 aaPredicted RBP13.72□□□□□ -0.21
CCDC130-202ENST00000540216 FOXJ1Q92949 421 aa13.72□□□□□ -0.21
CCDC130-202ENST00000540216 MRFAP1L1Q96HT8 127 aa13.72□□□□□ -0.21
CCDC130-202ENST00000540216 NUP85Q9BW27 656 aa13.72□□□□□ -0.21
CCDC130-202ENST00000540216 TRIM7Q9C029 511 aa13.72□□□□□ -0.21
CCDC130-202ENST00000540216 RBSNQ9H1K0 784 aa13.72□□□□□ -0.21
CCDC130-202ENST00000540216 MAGEH1Q9H213 219 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms