RNA–Protein interactions for RNA: ENST00000540109.5

PTPRD-214, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 6,210 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-214ENST00000540109 ACKR2O00590 384 aa6.17□□□□□ -1.42
PTPRD-214ENST00000540109 STAU1O95793 577 aaKnown RBP6.17□□□□□ -1.42
PTPRD-214ENST00000540109 ALBP02768 609 aa6.17□□□□□ -1.42
PTPRD-214ENST00000540109 RPLP2P05387 115 aaKnown RBP6.17□□□□□ -1.42
PTPRD-214ENST00000540109 PABPC1P11940 636 aaKnown RBP6.17□□□□□ -1.42
PTPRD-214ENST00000540109 NUDT2P50583 147 aa6.17□□□□□ -1.42
PTPRD-214ENST00000540109 SLC18A1P54219 525 aa6.17□□□□□ -1.42
PTPRD-214ENST00000540109 CSE1LP55060 971 aaKnown RBP6.17□□□□□ -1.42
PTPRD-214ENST00000540109 NRF1Q16656 503 aa6.17□□□□□ -1.42
PTPRD-214ENST00000540109 WDR45BQ5MNZ6 344 aa6.17□□□□□ -1.42
PTPRD-214ENST00000540109 C6orf52Q5T4I8 152 aa6.17□□□□□ -1.42
PTPRD-214ENST00000540109 GJB7Q6PEY0 223 aa6.17□□□□□ -1.42
PTPRD-214ENST00000540109 MPZL3Q6UWV2 235 aa6.17□□□□□ -1.42
PTPRD-214ENST00000540109 STK32CQ86UX6 486 aa6.17□□□□□ -1.42
PTPRD-214ENST00000540109 RHOT1Q8IXI2 618 aa6.17□□□□□ -1.42
PTPRD-214ENST00000540109 FAM13CQ8NE31 585 aa6.17□□□□□ -1.42
PTPRD-214ENST00000540109 KBTBD8Q8NFY9 601 aa6.17□□□□□ -1.42
PTPRD-214ENST00000540109 SNIP1Q8TAD8 396 aaKnown RBP6.17□□□□□ -1.42
PTPRD-214ENST00000540109 MLPHQ9BV36 600 aaPredicted RBP6.17□□□□□ -1.42
PTPRD-214ENST00000540109 SLC7A5P2Q9GIP4 190 aa6.17□□□□□ -1.42
PTPRD-214ENST00000540109 VPS11Q9H270 941 aa6.17□□□□□ -1.42
PTPRD-214ENST00000540109 GPRC5CQ9NQ84 441 aa6.17□□□□□ -1.42
PTPRD-214ENST00000540109 PRKAG2Q9UGJ0 569 aa6.17□□□□□ -1.42
PTPRD-214ENST00000540109 LRRC37A2A6NM11 1700 aa6.17□□□□□ -1.42
PTPRD-214ENST00000540109 OXSR1O95747 527 aaPredicted RBP6.17□□□□□ -1.42
PTPRD-214ENST00000540109 GH1P01241 217 aa6.17□□□□□ -1.42
PTPRD-214ENST00000540109 C4BPAP04003 597 aaKnown RBP6.17□□□□□ -1.42
PTPRD-214ENST00000540109 PRKCBP05771 671 aa6.17□□□□□ -1.42
PTPRD-214ENST00000540109 WEE2P0C1S8 567 aa6.17□□□□□ -1.42
PTPRD-214ENST00000540109 ZBTB48P10074 688 aaPredicted RBP6.17□□□□□ -1.42
PTPRD-214ENST00000540109 HOXB8P17481 243 aaPredicted RBP6.17□□□□□ -1.42
PTPRD-214ENST00000540109 PTPN7P35236 360 aa6.17□□□□□ -1.42
PTPRD-214ENST00000540109 HALP42357 657 aa6.17□□□□□ -1.42
PTPRD-214ENST00000540109 TMEM35BQ8NCS4 154 aa6.17□□□□□ -1.42
PTPRD-214ENST00000540109 TAS1R2Q8TE23 839 aa6.17□□□□□ -1.42
PTPRD-214ENST00000540109 BSNDQ8WZ55 320 aa6.17□□□□□ -1.42
PTPRD-214ENST00000540109 NCLNQ969V3 563 aa6.17□□□□□ -1.42
PTPRD-214ENST00000540109 KREMEN1Q96MU8 473 aa6.17□□□□□ -1.42
PTPRD-214ENST00000540109 SYTL2Q9HCH5 934 aa6.17□□□□□ -1.42
PTPRD-214ENST00000540109 TNFSF13BQ9Y275 285 aa6.17□□□□□ -1.42
PTPRD-214ENST00000540109 UMODL1Q5DID0 1318 aa6.17□□□□□ -1.42
PTPRD-214ENST00000540109 CCDC182A6NF36 153 aa6.17□□□□□ -1.42
PTPRD-214ENST00000540109 APOL1O14791 398 aa6.17□□□□□ -1.42
PTPRD-214ENST00000540109 CYP26A1O43174 497 aa6.17□□□□□ -1.42
PTPRD-214ENST00000540109 ACSL4O60488 711 aa6.17□□□□□ -1.42
PTPRD-214ENST00000540109 EGFRP00533 1210 aa6.17□□□□□ -1.42
PTPRD-214ENST00000540109 KRT19P08727 400 aa6.17□□□□□ -1.42
PTPRD-214ENST00000540109 ERP29P30040 261 aaKnown RBP6.17□□□□□ -1.42
PTPRD-214ENST00000540109 TCF7P36402 384 aaPredicted RBP6.17□□□□□ -1.42
PTPRD-214ENST00000540109 SLC39A4Q6P5W5 647 aa6.17□□□□□ -1.42
PTPRD-214ENST00000540109 KLHL17Q6TDP4 642 aa6.17□□□□□ -1.42
PTPRD-214ENST00000540109 LAYNQ6UX15 382 aa6.17□□□□□ -1.42
PTPRD-214ENST00000540109 CAMK1DQ8IU85 385 aa6.17□□□□□ -1.42
PTPRD-214ENST00000540109 COLGALT2Q8IYK4 626 aa6.17□□□□□ -1.42
PTPRD-214ENST00000540109 HM13Q8TCT9 377 aa6.17□□□□□ -1.42
PTPRD-214ENST00000540109 RBBP8Q99708 897 aa6.17□□□□□ -1.42
PTPRD-214ENST00000540109 SEMA6AQ9H2E6 1030 aa6.17□□□□□ -1.42
PTPRD-214ENST00000540109 ASB7Q9H672 318 aa6.17□□□□□ -1.42
PTPRD-214ENST00000540109 VTI1BQ9UEU0 232 aa6.17□□□□□ -1.42
PTPRD-214ENST00000540109 AJAP1Q9UKB5 411 aaPredicted RBP6.17□□□□□ -1.42
PTPRD-214ENST00000540109 CHKBQ9Y259 395 aa6.17□□□□□ -1.42
PTPRD-214ENST00000540109 DERAQ9Y315 318 aa6.17□□□□□ -1.42
PTPRD-214ENST00000540109 TPRKBQ9Y3C4 175 aa6.17□□□□□ -1.42
PTPRD-214ENST00000540109 DNAJC25-GNG10A0A024R161 153 aa6.17□□□□□ -1.42
PTPRD-214ENST00000540109 A0A1W2PRG6 482 aa6.17□□□□□ -1.42
PTPRD-214ENST00000540109 SLC22A2O15244 555 aa6.17□□□□□ -1.42
PTPRD-214ENST00000540109 B4GALT4O60513 344 aa6.17□□□□□ -1.42
PTPRD-214ENST00000540109 KRT1P04264 644 aa6.17□□□□□ -1.42
PTPRD-214ENST00000540109 SNRPAP09012 282 aaKnown RBP6.17□□□□□ -1.42
PTPRD-214ENST00000540109 GPD2P43304 727 aa6.17□□□□□ -1.42
PTPRD-214ENST00000540109 CCDC142Q17RM4 750 aa6.17□□□□□ -1.42
PTPRD-214ENST00000540109 C1QTNF12Q5T7M4 302 aa6.17□□□□□ -1.42
PTPRD-214ENST00000540109 LPCAT4Q643R3 524 aa6.17□□□□□ -1.42
PTPRD-214ENST00000540109 MFSD5Q6N075 450 aa6.17□□□□□ -1.42
PTPRD-214ENST00000540109 MZT2BQ6NZ67 158 aa6.17□□□□□ -1.42
PTPRD-214ENST00000540109 ZNF410Q86VK4 478 aa6.17□□□□□ -1.42
PTPRD-214ENST00000540109 MCOLN2Q8IZK6 566 aa6.17□□□□□ -1.42
PTPRD-214ENST00000540109 IQCKQ8N0W5 287 aa6.17□□□□□ -1.42
PTPRD-214ENST00000540109 CDC26Q8NHZ8 85 aa6.17□□□□□ -1.42
PTPRD-214ENST00000540109 ASAP3Q8TDY4 903 aa6.17□□□□□ -1.42
PTPRD-214ENST00000540109 CNDP1Q96KN2 507 aa6.17□□□□□ -1.42
PTPRD-214ENST00000540109 LRRC19Q9H756 370 aa6.17□□□□□ -1.42
PTPRD-214ENST00000540109 PCSK1NQ9UHG2 260 aa6.17□□□□□ -1.42
PTPRD-214ENST00000540109 RAPGEFL1Q9UHV5 662 aa6.17□□□□□ -1.42
PTPRD-214ENST00000540109 PROSCO94903 275 aa6.16□□□□□ -1.42
PTPRD-214ENST00000540109 BMP10O95393 424 aa6.16□□□□□ -1.42
PTPRD-214ENST00000540109 PAMP19021 973 aa6.16□□□□□ -1.42
PTPRD-214ENST00000540109 SCN4AP35499 1836 aa6.16□□□□□ -1.42
PTPRD-214ENST00000540109 GTF2A2P52657 109 aa6.16□□□□□ -1.42
PTPRD-214ENST00000540109 ARHGEF6Q15052 776 aa6.16□□□□□ -1.42
PTPRD-214ENST00000540109 PUS10Q3MIT2 529 aaKnown RBP6.16□□□□□ -1.42
PTPRD-214ENST00000540109 ZFP69Q49AA0 526 aa6.16□□□□□ -1.42
PTPRD-214ENST00000540109 SLC13A5Q86YT5 568 aaPredicted RBP6.16□□□□□ -1.42
PTPRD-214ENST00000540109 RFX6Q8HWS3 928 aa6.16□□□□□ -1.42
PTPRD-214ENST00000540109 SFRP1Q8N474 314 aa6.16□□□□□ -1.42
PTPRD-214ENST00000540109 OLIG1Q8TAK6 271 aa6.16□□□□□ -1.42
PTPRD-214ENST00000540109 EPB41L1Q9H4G0 881 aa6.16□□□□□ -1.42
PTPRD-214ENST00000540109 ELOVL6Q9H5J4 265 aa6.16□□□□□ -1.42
PTPRD-214ENST00000540109 UCKL1Q9NWZ5 548 aa6.16□□□□□ -1.42
PTPRD-214ENST00000540109 PCDHGC3Q9UN70 934 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms