RNA–Protein interactions for RNA: ENST00000540017.6

SNRPA1-203, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 1 (best)

Gene SNRPA1, Length 506 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-203ENST00000540017 METTL3Q86U44 580 aaKnown RBP18.78■□□□□ 0.6
SNRPA1-203ENST00000540017 TMEFF1Q8IYR6 380 aa18.78■□□□□ 0.6
SNRPA1-203ENST00000540017 DEFB119Q8N690 84 aa18.78■□□□□ 0.6
SNRPA1-203ENST00000540017 OR7D4Q8NG98 312 aa18.78■□□□□ 0.6
SNRPA1-203ENST00000540017 FNIP1Q8TF40 1166 aa18.78■□□□□ 0.6
SNRPA1-203ENST00000540017 LOXL4Q96JB6 756 aa18.78■□□□□ 0.6
SNRPA1-203ENST00000540017 ITM2CQ9NQX7 267 aa18.78■□□□□ 0.6
SNRPA1-203ENST00000540017 SCINQ9Y6U3 715 aa18.78■□□□□ 0.6
SNRPA1-203ENST00000540017 THADAQ6YHU6 1953 aa18.78■□□□□ 0.6
SNRPA1-203ENST00000540017 GVINP1Q7Z2Y8 2422 aa18.78■□□□□ 0.6
SNRPA1-203ENST00000540017 DMXL1Q9Y485 3027 aa18.77■□□□□ 0.6
SNRPA1-203ENST00000540017 MAP3K13O43283 966 aa18.77■□□□□ 0.6
SNRPA1-203ENST00000540017 RHOBTB1O94844 696 aa18.77■□□□□ 0.6
SNRPA1-203ENST00000540017 MT-CO1P00395 513 aa18.77■□□□□ 0.6
SNRPA1-203ENST00000540017 CYP1A2P05177 515 aa18.77■□□□□ 0.6
SNRPA1-203ENST00000540017 GLDCP23378 1020 aa18.77■□□□□ 0.6
SNRPA1-203ENST00000540017 L1CAMP32004 1257 aa18.77■□□□□ 0.6
SNRPA1-203ENST00000540017 TPMTP51580 245 aa18.77■□□□□ 0.6
SNRPA1-203ENST00000540017 RPS14P62263 151 aaKnown RBP18.77■□□□□ 0.6
SNRPA1-203ENST00000540017 SULT2A1Q06520 285 aa18.77■□□□□ 0.6
SNRPA1-203ENST00000540017 SEMA3BQ13214 749 aa18.77■□□□□ 0.6
SNRPA1-203ENST00000540017 MAPK8IP2Q13387 824 aaPredicted RBP18.77■□□□□ 0.6
SNRPA1-203ENST00000540017 BYSLQ13895 437 aaKnown RBP18.77■□□□□ 0.6
SNRPA1-203ENST00000540017 CA9Q16790 459 aa18.77■□□□□ 0.6
SNRPA1-203ENST00000540017 EFHC2Q5JST6 749 aa18.77■□□□□ 0.6
SNRPA1-203ENST00000540017 C6orf118Q5T5N4 469 aa18.77■□□□□ 0.6
SNRPA1-203ENST00000540017 C11orf74Q86VG3 221 aa18.77■□□□□ 0.6
SNRPA1-203ENST00000540017 FRS2Q8WU20 508 aa18.77■□□□□ 0.6
SNRPA1-203ENST00000540017 PRCCQ92733 491 aaPredicted RBP18.77■□□□□ 0.6
SNRPA1-203ENST00000540017 PTPRN2Q92932 1015 aa18.77■□□□□ 0.6
SNRPA1-203ENST00000540017 TBC1D31Q96DN5 1066 aa18.77■□□□□ 0.6
SNRPA1-203ENST00000540017 PACSIN1Q9BY11 444 aa18.77■□□□□ 0.6
SNRPA1-203ENST00000540017 MRPL47Q9HD33 250 aaKnown RBP18.77■□□□□ 0.6
SNRPA1-203ENST00000540017 PCSK1NQ9UHG2 260 aa18.77■□□□□ 0.6
SNRPA1-203ENST00000540017 VPS51Q9UID3 782 aa18.77■□□□□ 0.6
SNRPA1-203ENST00000540017 ILVBLA1L0T0 632 aa18.76■□□□□ 0.59
SNRPA1-203ENST00000540017 LRCH4O75427 683 aa18.76■□□□□ 0.59
SNRPA1-203ENST00000540017 TCF4P15884 667 aa18.76■□□□□ 0.59
SNRPA1-203ENST00000540017 RHOQP17081 205 aa18.76■□□□□ 0.59
SNRPA1-203ENST00000540017 MIPP30301 263 aa18.76■□□□□ 0.59
SNRPA1-203ENST00000540017 PTGER3P43115 390 aa18.76■□□□□ 0.59
SNRPA1-203ENST00000540017 SLC18A3Q16572 532 aa18.76■□□□□ 0.59
SNRPA1-203ENST00000540017 BTBD6Q96KE9 485 aa18.76■□□□□ 0.59
SNRPA1-203ENST00000540017 PPP1R9BQ96SB3 815 aa18.76■□□□□ 0.59
SNRPA1-203ENST00000540017 FAM129BQ96TA1 746 aa18.76■□□□□ 0.59
SNRPA1-203ENST00000540017 RSPH9Q9H1X1 276 aaPredicted RBP18.76■□□□□ 0.59
SNRPA1-203ENST00000540017 SMOC1Q9H4F8 434 aa18.76■□□□□ 0.59
SNRPA1-203ENST00000540017 TMEM248Q9NWD8 314 aa18.76■□□□□ 0.59
SNRPA1-203ENST00000540017 DNAI1Q9UI46 699 aa18.76■□□□□ 0.59
SNRPA1-203ENST00000540017 EDDM13A0A1B0GTR0 161 aa18.75■□□□□ 0.59
SNRPA1-203ENST00000540017 SSU72P8A0A1W2PR75 194 aa18.75■□□□□ 0.59
SNRPA1-203ENST00000540017 TARSL2A2RTX5 802 aaKnown RBP18.75■□□□□ 0.59
SNRPA1-203ENST00000540017 AKR1B15C9JRZ8 316 aaPredicted RBP18.75■□□□□ 0.59
SNRPA1-203ENST00000540017 K7ERQ8 282 aa18.75■□□□□ 0.59
SNRPA1-203ENST00000540017 ATP9BO43861 1147 aa18.75■□□□□ 0.59
SNRPA1-203ENST00000540017 CREB3O43889 395 aa18.75■□□□□ 0.59
SNRPA1-203ENST00000540017 TPM1P09493 284 aa18.75■□□□□ 0.59
SNRPA1-203ENST00000540017 ACVRL1P37023 503 aa18.75■□□□□ 0.59
SNRPA1-203ENST00000540017 DHPSP49366 369 aaPredicted RBP18.75■□□□□ 0.59
SNRPA1-203ENST00000540017 VASPP50552 380 aaPredicted RBP18.75■□□□□ 0.59
SNRPA1-203ENST00000540017 ZNF75DP51815 510 aa18.75■□□□□ 0.59
SNRPA1-203ENST00000540017 AIF1P55008 147 aa18.75■□□□□ 0.59
SNRPA1-203ENST00000540017 RPL6Q02878 288 aaKnown RBP18.75■□□□□ 0.59
SNRPA1-203ENST00000540017 GNA12Q03113 381 aa18.75■□□□□ 0.59
SNRPA1-203ENST00000540017 LINGO4Q6UY18 593 aa18.75■□□□□ 0.59
SNRPA1-203ENST00000540017 ARMCX6Q7L4S7 300 aa18.75■□□□□ 0.59
SNRPA1-203ENST00000540017 LPCAT2Q7L5N7 544 aa18.75■□□□□ 0.59
SNRPA1-203ENST00000540017 SLC41A1Q8IVJ1 513 aa18.75■□□□□ 0.59
SNRPA1-203ENST00000540017 STK40Q8N2I9 435 aa18.75■□□□□ 0.59
SNRPA1-203ENST00000540017 SH2D3CQ8N5H7 860 aa18.75■□□□□ 0.59
SNRPA1-203ENST00000540017 TC2NQ8N9U0 490 aa18.75■□□□□ 0.59
SNRPA1-203ENST00000540017 DCAF4L2Q8NA75 395 aa18.75■□□□□ 0.59
SNRPA1-203ENST00000540017 SNRNP25Q9BV90 132 aaKnown RBP18.75■□□□□ 0.59
SNRPA1-203ENST00000540017 NUP85Q9BW27 656 aa18.75■□□□□ 0.59
SNRPA1-203ENST00000540017 SEMA4GQ9NTN9 838 aa18.75■□□□□ 0.59
SNRPA1-203ENST00000540017 ZNHIT6Q9NWK9 470 aaKnown RBP18.75■□□□□ 0.59
SNRPA1-203ENST00000540017 WSB2Q9NYS7 404 aaPredicted RBP18.75■□□□□ 0.59
SNRPA1-203ENST00000540017 SLC25A13Q9UJS0 675 aa18.75■□□□□ 0.59
SNRPA1-203ENST00000540017 LAMA1P25391 3075 aa18.75■□□□□ 0.59
SNRPA1-203ENST00000540017 BCLAF3A2AJT9 711 aaKnown RBP18.74■□□□□ 0.59
SNRPA1-203ENST00000540017 ZMPSTE24O75844 475 aa18.74■□□□□ 0.59
SNRPA1-203ENST00000540017 RNF8O76064 485 aa18.74■□□□□ 0.59
SNRPA1-203ENST00000540017 IGLV3-19P01714 112 aa18.74■□□□□ 0.59
SNRPA1-203ENST00000540017 ACADMP11310 421 aa18.74■□□□□ 0.59
SNRPA1-203ENST00000540017 SRCP12931 536 aa18.74■□□□□ 0.59
SNRPA1-203ENST00000540017 DESP17661 470 aa18.74■□□□□ 0.59
SNRPA1-203ENST00000540017 EPHB2P29323 1055 aa18.74■□□□□ 0.59
SNRPA1-203ENST00000540017 CD6P30203 668 aa18.74■□□□□ 0.59
SNRPA1-203ENST00000540017 MPLP40238 635 aa18.74■□□□□ 0.59
SNRPA1-203ENST00000540017 MAPKAPK2P49137 400 aa18.74■□□□□ 0.59
SNRPA1-203ENST00000540017 KRT83P78385 493 aa18.74■□□□□ 0.59
SNRPA1-203ENST00000540017 CREB5Q02930 508 aa18.74■□□□□ 0.59
SNRPA1-203ENST00000540017 DLG2Q15700 870 aa18.74■□□□□ 0.59
SNRPA1-203ENST00000540017 PLA2G2CQ5R387 149 aa18.74■□□□□ 0.59
SNRPA1-203ENST00000540017 ERMARDQ5T6L9 678 aa18.74■□□□□ 0.59
SNRPA1-203ENST00000540017 SLC36A4Q6YBV0 504 aa18.74■□□□□ 0.59
SNRPA1-203ENST00000540017 ZNF783Q6ZMS7 281 aa18.74■□□□□ 0.59
SNRPA1-203ENST00000540017 TOE1Q96GM8 510 aaKnown RBP18.74■□□□□ 0.59
SNRPA1-203ENST00000540017 SPON2Q9BUD6 331 aa18.74■□□□□ 0.59
SNRPA1-203ENST00000540017 C2orf49Q9BVC5 232 aaPredicted RBP18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms