RNA–Protein interactions for RNA: ENST00000539843.5

UBE3B-211, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 2

Gene UBE3B, Length 586 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-211ENST00000539843 ZNF397Q8NF99 534 aaPredicted RBP15.74■□□□□ 0.11
UBE3B-211ENST00000539843 FAM129BQ96TA1 746 aa15.74■□□□□ 0.11
UBE3B-211ENST00000539843 PRMT1Q99873 361 aaKnown RBP15.74■□□□□ 0.11
UBE3B-211ENST00000539843 C2orf49Q9BVC5 232 aaPredicted RBP15.74■□□□□ 0.11
UBE3B-211ENST00000539843 WDCPQ9H6R7 721 aa15.74■□□□□ 0.11
UBE3B-211ENST00000539843 DYRK4Q9NR20 520 aa15.74■□□□□ 0.11
UBE3B-211ENST00000539843 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP15.74■□□□□ 0.11
UBE3B-211ENST00000539843 SERGEFQ9UGK8 458 aa15.74■□□□□ 0.11
UBE3B-211ENST00000539843 A0A1B0GTQ1 180 aa15.73■□□□□ 0.11
UBE3B-211ENST00000539843 ERBB2P04626 1255 aa15.73■□□□□ 0.11
UBE3B-211ENST00000539843 RHOCP08134 193 aa15.73■□□□□ 0.11
UBE3B-211ENST00000539843 ATXN1LP0C7T5 689 aaKnown RBP15.73■□□□□ 0.11
UBE3B-211ENST00000539843 SULT1E1P49888 294 aa15.73■□□□□ 0.11
UBE3B-211ENST00000539843 PITX1P78337 314 aaPredicted RBP15.73■□□□□ 0.11
UBE3B-211ENST00000539843 IL9RQ01113 521 aa15.73■□□□□ 0.11
UBE3B-211ENST00000539843 VWA3BQ502W6 1294 aa15.73■□□□□ 0.11
UBE3B-211ENST00000539843 HS1BP3Q53T59 392 aa15.73■□□□□ 0.11
UBE3B-211ENST00000539843 NAPEPLDQ6IQ20 393 aa15.73■□□□□ 0.11
UBE3B-211ENST00000539843 TMPRSS7Q7RTY8 843 aa15.73■□□□□ 0.11
UBE3B-211ENST00000539843 SLCO6A1Q86UG4 719 aa15.73■□□□□ 0.11
UBE3B-211ENST00000539843 SIK2Q9H0K1 926 aa15.73■□□□□ 0.11
UBE3B-211ENST00000539843 NDST4Q9H3R1 872 aa15.73■□□□□ 0.11
UBE3B-211ENST00000539843 CHMP5Q9NZZ3 219 aa15.73■□□□□ 0.11
UBE3B-211ENST00000539843 DMTF1Q9Y222 760 aa15.73■□□□□ 0.11
UBE3B-211ENST00000539843 HS3ST4Q9Y661 456 aa15.73■□□□□ 0.11
UBE3B-211ENST00000539843 SLCO1B1Q9Y6L6 691 aa15.73■□□□□ 0.11
UBE3B-211ENST00000539843 KCNK3O14649 394 aa15.72■□□□□ 0.11
UBE3B-211ENST00000539843 BNIP3LO60238 219 aa15.72■□□□□ 0.11
UBE3B-211ENST00000539843 PAGE1O75459 146 aa15.72■□□□□ 0.11
UBE3B-211ENST00000539843 ERCC5P28715 1186 aaPredicted RBP15.72■□□□□ 0.11
UBE3B-211ENST00000539843 HNF1BP35680 557 aa15.72■□□□□ 0.11
UBE3B-211ENST00000539843 RECQLP46063 649 aaPredicted RBP15.72■□□□□ 0.11
UBE3B-211ENST00000539843 RNASE9P60153 205 aaKnown RBP15.72■□□□□ 0.11
UBE3B-211ENST00000539843 CENPCQ03188 943 aa15.72■□□□□ 0.11
UBE3B-211ENST00000539843 DEUP1Q05D60 604 aa15.72■□□□□ 0.11
UBE3B-211ENST00000539843 OVGP1Q12889 678 aa15.72■□□□□ 0.11
UBE3B-211ENST00000539843 EIF4EBP2Q13542 120 aaPredicted RBP15.72■□□□□ 0.11
UBE3B-211ENST00000539843 STAT4Q14765 748 aa15.72■□□□□ 0.11
UBE3B-211ENST00000539843 DLG2Q15700 870 aa15.72■□□□□ 0.11
UBE3B-211ENST00000539843 PTPN20Q4JDL3 420 aa15.72■□□□□ 0.11
UBE3B-211ENST00000539843 SETMARQ53H47 684 aaPredicted RBP15.72■□□□□ 0.11
UBE3B-211ENST00000539843 C6orf118Q5T5N4 469 aa15.72■□□□□ 0.11
UBE3B-211ENST00000539843 FAM102AQ5T9C2 384 aaPredicted RBP15.72■□□□□ 0.11
UBE3B-211ENST00000539843 CXorf57Q6NSI4 855 aaKnown RBP15.72■□□□□ 0.11
UBE3B-211ENST00000539843 SLC47A2Q86VL8 602 aa15.72■□□□□ 0.11
UBE3B-211ENST00000539843 ERICH1Q86X53 443 aa15.72■□□□□ 0.11
UBE3B-211ENST00000539843 WDTC1Q8N5D0 677 aa15.72■□□□□ 0.11
UBE3B-211ENST00000539843 AADATQ8N5Z0 425 aa15.72■□□□□ 0.11
UBE3B-211ENST00000539843 C18orf8Q96DM3 657 aa15.72■□□□□ 0.11
UBE3B-211ENST00000539843 TUBGCP2Q9BSJ2 902 aa15.72■□□□□ 0.11
UBE3B-211ENST00000539843 FEM1AQ9BSK4 669 aa15.72■□□□□ 0.11
UBE3B-211ENST00000539843 TKTL2Q9H0I9 626 aa15.72■□□□□ 0.11
UBE3B-211ENST00000539843 LHX6Q9UPM6 363 aa15.72■□□□□ 0.11
UBE3B-211ENST00000539843 BTBD3Q9Y2F9 522 aa15.72■□□□□ 0.11
UBE3B-211ENST00000539843 FAM208BQ5VWN6 2430 aa15.71■□□□□ 0.11
UBE3B-211ENST00000539843 FOXN3O00409 490 aaPredicted RBP15.71■□□□□ 0.11
UBE3B-211ENST00000539843 ATP9BO43861 1147 aa15.71■□□□□ 0.11
UBE3B-211ENST00000539843 LSM8O95777 96 aaKnown RBP15.71■□□□□ 0.11
UBE3B-211ENST00000539843 SCNN1AP37088 669 aa15.71■□□□□ 0.11
UBE3B-211ENST00000539843 CLCN6P51797 869 aa15.71■□□□□ 0.11
UBE3B-211ENST00000539843 APBA1Q02410 837 aa15.71■□□□□ 0.11
UBE3B-211ENST00000539843 SETD3Q86TU7 594 aaPredicted RBP15.71■□□□□ 0.11
UBE3B-211ENST00000539843 IQCHQ86VS3 1027 aa15.71■□□□□ 0.11
UBE3B-211ENST00000539843 FAM71AQ8IYT1 594 aa15.71■□□□□ 0.11
UBE3B-211ENST00000539843 MFSD2AQ8NA29 543 aa15.71■□□□□ 0.11
UBE3B-211ENST00000539843 ATP11CQ8NB49 1132 aa15.71■□□□□ 0.11
UBE3B-211ENST00000539843 PIP4K2CQ8TBX8 421 aa15.71■□□□□ 0.11
UBE3B-211ENST00000539843 PPP1R16AQ96I34 528 aa15.71■□□□□ 0.11
UBE3B-211ENST00000539843 ORAI3Q9BRQ5 295 aa15.71■□□□□ 0.11
UBE3B-211ENST00000539843 CLSTN2Q9H4D0 955 aa15.71■□□□□ 0.11
UBE3B-211ENST00000539843 PCDHGA1Q9Y5H4 931 aa15.71■□□□□ 0.11
UBE3B-211ENST00000539843 TLR4O00206 839 aa15.7■□□□□ 0.1
UBE3B-211ENST00000539843 MCF2LO15068 1137 aa15.7■□□□□ 0.1
UBE3B-211ENST00000539843 PLRG1O43660 514 aaKnown RBP15.7■□□□□ 0.1
UBE3B-211ENST00000539843 LDOC1O95751 146 aaPredicted RBP15.7■□□□□ 0.1
UBE3B-211ENST00000539843 PRNPP04156 253 aa15.7■□□□□ 0.1
UBE3B-211ENST00000539843 C1SP09871 688 aa15.7■□□□□ 0.1
UBE3B-211ENST00000539843 NUMBP49757 651 aa15.7■□□□□ 0.1
UBE3B-211ENST00000539843 DRAP1Q14919 205 aaPredicted RBP15.7■□□□□ 0.1
UBE3B-211ENST00000539843 CT47A1Q5JQC4 288 aaPredicted RBP15.7■□□□□ 0.1
UBE3B-211ENST00000539843 Q6ZVU0 165 aa15.7■□□□□ 0.1
UBE3B-211ENST00000539843 TRIM69Q86WT6 500 aa15.7■□□□□ 0.1
UBE3B-211ENST00000539843 SH2D3CQ8N5H7 860 aa15.7■□□□□ 0.1
UBE3B-211ENST00000539843 FRS2Q8WU20 508 aa15.7■□□□□ 0.1
UBE3B-211ENST00000539843 CNDP2Q96KP4 475 aaKnown RBP15.7■□□□□ 0.1
UBE3B-211ENST00000539843 NUP62CLQ9H1M0 184 aa15.7■□□□□ 0.1
UBE3B-211ENST00000539843 ERVMER34-1Q9H9K5 563 aa15.7■□□□□ 0.1
UBE3B-211ENST00000539843 PREBQ9HCU5 417 aa15.7■□□□□ 0.1
UBE3B-211ENST00000539843 ARHGEF38Q9NXL2 777 aa15.7■□□□□ 0.1
UBE3B-211ENST00000539843 TBC1D30Q9Y2I9 924 aa15.7■□□□□ 0.1
UBE3B-211ENST00000539843 NUMA1Q14980 2115 aa15.7■□□□□ 0.1
UBE3B-211ENST00000539843 E9PAM4 449 aa15.69■□□□□ 0.1
UBE3B-211ENST00000539843 PRAMEF26H0Y7S4 382 aa15.69■□□□□ 0.1
UBE3B-211ENST00000539843 ENC1O14682 589 aa15.69■□□□□ 0.1
UBE3B-211ENST00000539843 LATO43561 262 aa15.69■□□□□ 0.1
UBE3B-211ENST00000539843 RNGTTO60942 597 aaKnown RBP15.69■□□□□ 0.1
UBE3B-211ENST00000539843 VAV1P15498 845 aa15.69■□□□□ 0.1
UBE3B-211ENST00000539843 CYP11B1P15538 503 aa15.69■□□□□ 0.1
UBE3B-211ENST00000539843 EEF1GP26641 437 aaKnown RBP15.69■□□□□ 0.1
UBE3B-211ENST00000539843 EPHA8P29322 1005 aaPredicted RBP15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms