RNA–Protein interactions for RNA: ENST00000539784.1

TSPAN9-IT1-201, TSPAN9 intronic transcript 1, humanhuman

TSL 4 BASIC

Gene TSPAN9-IT1, Length 562 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-IT1-201ENST00000539784 IGHV4-34P06331 123 aa13.1□□□□□ -0.31
TSPAN9-IT1-201ENST00000539784 RHOCP08134 193 aa13.1□□□□□ -0.31
TSPAN9-IT1-201ENST00000539784 C7P10643 843 aa13.1□□□□□ -0.31
TSPAN9-IT1-201ENST00000539784 CDK11BP21127 795 aaKnown RBP13.1□□□□□ -0.31
TSPAN9-IT1-201ENST00000539784 CD27P26842 260 aa13.1□□□□□ -0.31
TSPAN9-IT1-201ENST00000539784 SCNN1AP37088 669 aa13.1□□□□□ -0.31
TSPAN9-IT1-201ENST00000539784 METAP1P53582 386 aa13.1□□□□□ -0.31
TSPAN9-IT1-201ENST00000539784 CDH4P55283 916 aa13.1□□□□□ -0.31
TSPAN9-IT1-201ENST00000539784 ATP11AP98196 1134 aa13.1□□□□□ -0.31
TSPAN9-IT1-201ENST00000539784 CDR2Q01850 454 aa13.1□□□□□ -0.31
TSPAN9-IT1-201ENST00000539784 MYL5Q02045 173 aa13.1□□□□□ -0.31
TSPAN9-IT1-201ENST00000539784 SLC14A1Q13336 389 aa13.1□□□□□ -0.31
TSPAN9-IT1-201ENST00000539784 ELAVL3Q14576 367 aaKnown RBP13.1□□□□□ -0.31
TSPAN9-IT1-201ENST00000539784 CDO1Q16878 200 aa13.1□□□□□ -0.31
TSPAN9-IT1-201ENST00000539784 KIF19Q2TAC6 998 aa13.1□□□□□ -0.31
TSPAN9-IT1-201ENST00000539784 IL27RAQ6UWB1 636 aa13.1□□□□□ -0.31
TSPAN9-IT1-201ENST00000539784 LRRC31Q6UY01 552 aa13.1□□□□□ -0.31
TSPAN9-IT1-201ENST00000539784 Q6ZVU0 165 aa13.1□□□□□ -0.31
TSPAN9-IT1-201ENST00000539784 FAM131BQ86XD5 332 aa13.1□□□□□ -0.31
TSPAN9-IT1-201ENST00000539784 ZNF677Q86XU0 584 aa13.1□□□□□ -0.31
TSPAN9-IT1-201ENST00000539784 AADATQ8N5Z0 425 aa13.1□□□□□ -0.31
TSPAN9-IT1-201ENST00000539784 NEK11Q8NG66 645 aa13.1□□□□□ -0.31
TSPAN9-IT1-201ENST00000539784 OR14C36Q8NHC7 312 aa13.1□□□□□ -0.31
TSPAN9-IT1-201ENST00000539784 NT5C3BQ969T7 300 aa13.1□□□□□ -0.31
TSPAN9-IT1-201ENST00000539784 ALG14Q96F25 216 aa13.1□□□□□ -0.31
TSPAN9-IT1-201ENST00000539784 PPP1R9BQ96SB3 815 aa13.1□□□□□ -0.31
TSPAN9-IT1-201ENST00000539784 C11orf70Q9BRQ4 267 aa13.1□□□□□ -0.31
TSPAN9-IT1-201ENST00000539784 SCNM1Q9BWG6 230 aa13.1□□□□□ -0.31
TSPAN9-IT1-201ENST00000539784 TM7SF3Q9NS93 570 aa13.1□□□□□ -0.31
TSPAN9-IT1-201ENST00000539784 MPP6Q9NZW5 540 aa13.1□□□□□ -0.31
TSPAN9-IT1-201ENST00000539784 ANKRD6Q9Y2G4 727 aa13.1□□□□□ -0.31
TSPAN9-IT1-201ENST00000539784 SIK3Q9Y2K2 1263 aa13.1□□□□□ -0.31
TSPAN9-IT1-201ENST00000539784 SNX11Q9Y5W9 270 aa13.1□□□□□ -0.31
TSPAN9-IT1-201ENST00000539784 CNOT1A5YKK6 2376 aaKnown RBP13.1□□□□□ -0.31
TSPAN9-IT1-201ENST00000539784 NYNRINQ9P2P1 1898 aaKnown RBP13.1□□□□□ -0.31
TSPAN9-IT1-201ENST00000539784 E9PAM4 449 aa13.09□□□□□ -0.31
TSPAN9-IT1-201ENST00000539784 KCNK3O14649 394 aa13.09□□□□□ -0.31
TSPAN9-IT1-201ENST00000539784 SNAP91O60641 907 aa13.09□□□□□ -0.31
TSPAN9-IT1-201ENST00000539784 GJB6O95452 261 aa13.09□□□□□ -0.31
TSPAN9-IT1-201ENST00000539784 GOT1P17174 413 aa13.09□□□□□ -0.31
TSPAN9-IT1-201ENST00000539784 CHRNB2P17787 502 aa13.09□□□□□ -0.31
TSPAN9-IT1-201ENST00000539784 C5AR1P21730 350 aa13.09□□□□□ -0.31
TSPAN9-IT1-201ENST00000539784 RDXP35241 583 aaKnown RBP13.09□□□□□ -0.31
TSPAN9-IT1-201ENST00000539784 STAT1P42224 750 aa13.09□□□□□ -0.31
TSPAN9-IT1-201ENST00000539784 JAM2P57087 298 aa13.09□□□□□ -0.31
TSPAN9-IT1-201ENST00000539784 FMO1Q01740 532 aa13.09□□□□□ -0.31
TSPAN9-IT1-201ENST00000539784 UBXN1Q04323 297 aa13.09□□□□□ -0.31
TSPAN9-IT1-201ENST00000539784 TRIP6Q15654 476 aaKnown RBP13.09□□□□□ -0.31
TSPAN9-IT1-201ENST00000539784 DLG2Q15700 870 aa13.09□□□□□ -0.31
TSPAN9-IT1-201ENST00000539784 RAB6CQ53S08 254 aa13.09□□□□□ -0.31
TSPAN9-IT1-201ENST00000539784 CCDC183Q5T5S1 534 aa13.09□□□□□ -0.31
TSPAN9-IT1-201ENST00000539784 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.09□□□□□ -0.31
TSPAN9-IT1-201ENST00000539784 AOPEPQ8N6M6 819 aa13.09□□□□□ -0.31
TSPAN9-IT1-201ENST00000539784 OR2T34Q8NGX1 318 aa13.09□□□□□ -0.31
TSPAN9-IT1-201ENST00000539784 FRS2Q8WU20 508 aa13.09□□□□□ -0.31
TSPAN9-IT1-201ENST00000539784 OR8D1Q8WZ84 308 aa13.09□□□□□ -0.31
TSPAN9-IT1-201ENST00000539784 PGAP3Q96FM1 320 aaPredicted RBP13.09□□□□□ -0.31
TSPAN9-IT1-201ENST00000539784 SLC6A18Q96N87 628 aa13.09□□□□□ -0.31
TSPAN9-IT1-201ENST00000539784 RAB6CQ9H0N0 254 aa13.09□□□□□ -0.31
TSPAN9-IT1-201ENST00000539784 SEPT11Q9NVA2 429 aaKnown RBP13.09□□□□□ -0.31
TSPAN9-IT1-201ENST00000539784 TMEM59LQ9UK28 342 aa13.09□□□□□ -0.31
TSPAN9-IT1-201ENST00000539784 FZD4Q9ULV1 537 aa13.09□□□□□ -0.31
TSPAN9-IT1-201ENST00000539784 TBC1D30Q9Y2I9 924 aa13.09□□□□□ -0.31
TSPAN9-IT1-201ENST00000539784 OR51B4Q9Y5P0 310 aa13.09□□□□□ -0.31
TSPAN9-IT1-201ENST00000539784 TBC1D3DA0A087WVF3 549 aa13.08□□□□□ -0.32
TSPAN9-IT1-201ENST00000539784 TBC1D3IA0A087WXS9 549 aa13.08□□□□□ -0.32
TSPAN9-IT1-201ENST00000539784 TBC1D3EA0A087X179 549 aa13.08□□□□□ -0.32
TSPAN9-IT1-201ENST00000539784 TBC1D3KA0A087X1G2 549 aa13.08□□□□□ -0.32
TSPAN9-IT1-201ENST00000539784 TBC1D3FA6NER0 549 aaPredicted RBP13.08□□□□□ -0.32
TSPAN9-IT1-201ENST00000539784 LGALS16A8MUM7 142 aa13.08□□□□□ -0.32
TSPAN9-IT1-201ENST00000539784 C1QTNF9BB2RNN3 333 aa13.08□□□□□ -0.32
TSPAN9-IT1-201ENST00000539784 TBC1D3LB9A6J9 549 aa13.08□□□□□ -0.32
TSPAN9-IT1-201ENST00000539784 ATP9BO43861 1147 aa13.08□□□□□ -0.32
TSPAN9-IT1-201ENST00000539784 RTN2O75298 545 aa13.08□□□□□ -0.32
TSPAN9-IT1-201ENST00000539784 KRT37O76014 449 aa13.08□□□□□ -0.32
TSPAN9-IT1-201ENST00000539784 MBD3O95983 291 aa13.08□□□□□ -0.32
TSPAN9-IT1-201ENST00000539784 CYP1A1P04798 512 aaPredicted RBP13.08□□□□□ -0.32
TSPAN9-IT1-201ENST00000539784 TBC1D3HP0C7X1 549 aa13.08□□□□□ -0.32
TSPAN9-IT1-201ENST00000539784 C1QTNF9P0C862 333 aa13.08□□□□□ -0.32
TSPAN9-IT1-201ENST00000539784 GRIA4P48058 902 aa13.08□□□□□ -0.32
TSPAN9-IT1-201ENST00000539784 ADPRHP54922 357 aa13.08□□□□□ -0.32
TSPAN9-IT1-201ENST00000539784 C21orf59P57076 290 aa13.08□□□□□ -0.32
TSPAN9-IT1-201ENST00000539784 KRT83P78385 493 aa13.08□□□□□ -0.32
TSPAN9-IT1-201ENST00000539784 IL9RQ01113 521 aa13.08□□□□□ -0.32
TSPAN9-IT1-201ENST00000539784 C15orf59Q2T9L4 293 aaPredicted RBP13.08□□□□□ -0.32
TSPAN9-IT1-201ENST00000539784 C5orf22Q49AR2 442 aa13.08□□□□□ -0.32
TSPAN9-IT1-201ENST00000539784 KCNT1Q5JUK3 1230 aa13.08□□□□□ -0.32
TSPAN9-IT1-201ENST00000539784 TBC1D3GQ6DHY5 549 aa13.08□□□□□ -0.32
TSPAN9-IT1-201ENST00000539784 TBC1D3CQ6IPX1 549 aa13.08□□□□□ -0.32
TSPAN9-IT1-201ENST00000539784 LINGO4Q6UY18 593 aa13.08□□□□□ -0.32
TSPAN9-IT1-201ENST00000539784 DSG4Q86SJ6 1040 aa13.08□□□□□ -0.32
TSPAN9-IT1-201ENST00000539784 ZNF683Q8IZ20 524 aa13.08□□□□□ -0.32
TSPAN9-IT1-201ENST00000539784 TBC1D3Q8IZP1 549 aaPredicted RBP13.08□□□□□ -0.32
TSPAN9-IT1-201ENST00000539784 SH2D3CQ8N5H7 860 aa13.08□□□□□ -0.32
TSPAN9-IT1-201ENST00000539784 ATP11CQ8NB49 1132 aa13.08□□□□□ -0.32
TSPAN9-IT1-201ENST00000539784 PSMB7Q99436 277 aa13.08□□□□□ -0.32
TSPAN9-IT1-201ENST00000539784 ORAI3Q9BRQ5 295 aa13.08□□□□□ -0.32
TSPAN9-IT1-201ENST00000539784 AASDHPPTQ9NRN7 309 aa13.08□□□□□ -0.32
TSPAN9-IT1-201ENST00000539784 LIMA1Q9UHB6 759 aaKnown RBP13.08□□□□□ -0.32
TSPAN9-IT1-201ENST00000539784 ADAMTS1Q9UHI8 967 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms