RNA–Protein interactions for RNA: ENST00000539632.1

CD163-208, Transcript of CD163 molecule, human

TSL 3

Gene CD163, Length 548 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CD163-208	ENST00000539632	DMC1	Q14565	340 aa		11.5	□□□□□ -0.57
CD163-208	ENST00000539632	CCDC85B	Q15834	202 aa	Predicted RBP	11.5	□□□□□ -0.57
CD163-208	ENST00000539632	P3H1	Q32P28	736 aa		11.5	□□□□□ -0.57
CD163-208	ENST00000539632	PREPL	Q4J6C6	727 aa	Predicted RBP	11.5	□□□□□ -0.57
CD163-208	ENST00000539632	FYB2	Q5VWT5	728 aa		11.5	□□□□□ -0.57
CD163-208	ENST00000539632		Q7L0L9	218 aa		11.5	□□□□□ -0.57
CD163-208	ENST00000539632	METTL3	Q86U44	580 aa	Known RBP	11.5	□□□□□ -0.57
CD163-208	ENST00000539632	ARHGAP12	Q8IWW6	846 aa		11.5	□□□□□ -0.57
CD163-208	ENST00000539632	IFT20	Q8IY31	132 aa		11.5	□□□□□ -0.57
CD163-208	ENST00000539632	ADGRG2	Q8IZP9	1017 aa		11.5	□□□□□ -0.57
CD163-208	ENST00000539632	BBS5	Q8N3I7	341 aa		11.5	□□□□□ -0.57
CD163-208	ENST00000539632	BBOF1	Q8ND07	529 aa		11.5	□□□□□ -0.57
CD163-208	ENST00000539632	FIBIN	Q8TAL6	211 aa		11.5	□□□□□ -0.57
CD163-208	ENST00000539632	ARHGEF2	Q92974	986 aa	Known RBP	11.5	□□□□□ -0.57
CD163-208	ENST00000539632	LRRC45	Q96CN5	670 aa		11.5	□□□□□ -0.57
CD163-208	ENST00000539632	CELF6	Q96J87	481 aa	Known RBP	11.5	□□□□□ -0.57
CD163-208	ENST00000539632	GUCD1	Q96NT3	240 aa		11.5	□□□□□ -0.57
CD163-208	ENST00000539632	FAM118B	Q9BPY3	351 aa		11.5	□□□□□ -0.57
CD163-208	ENST00000539632	TMEM121	Q9BTD3	319 aa		11.5	□□□□□ -0.57
CD163-208	ENST00000539632	LRRC1	Q9BTT6	524 aa		11.5	□□□□□ -0.57
CD163-208	ENST00000539632	PHF7	Q9BWX1	381 aa	Predicted RBP	11.5	□□□□□ -0.57
CD163-208	ENST00000539632	SLC39A8	Q9C0K1	460 aa		11.5	□□□□□ -0.57
CD163-208	ENST00000539632	MUC3B	Q9H195	1237 aa		11.5	□□□□□ -0.57
CD163-208	ENST00000539632	SP110	Q9HB58	689 aa		11.5	□□□□□ -0.57
CD163-208	ENST00000539632	PAK5	Q9P286	719 aa		11.5	□□□□□ -0.57
CD163-208	ENST00000539632	ASIC3	Q9UHC3	531 aa		11.5	□□□□□ -0.57
CD163-208	ENST00000539632	CDH22	Q9UJ99	828 aa		11.5	□□□□□ -0.57
CD163-208	ENST00000539632	TRHDE	Q9UKU6	1024 aa		11.5	□□□□□ -0.57
CD163-208	ENST00000539632	MFHAS1	Q9Y4C4	1052 aa		11.5	□□□□□ -0.57
CD163-208	ENST00000539632	C5orf60	A6NFR6	353 aa		11.49	□□□□□ -0.57
CD163-208	ENST00000539632	NEDD8-MDP1	E9PL57	170 aa		11.49	□□□□□ -0.57
CD163-208	ENST00000539632	SMAP	O00193	183 aa		11.49	□□□□□ -0.57
CD163-208	ENST00000539632	SCAMP3	O14828	347 aa	Known RBP	11.49	□□□□□ -0.57
CD163-208	ENST00000539632	MATN3	O15232	486 aa		11.49	□□□□□ -0.57
CD163-208	ENST00000539632	CHAD	O15335	359 aa		11.49	□□□□□ -0.57
CD163-208	ENST00000539632	CTIF	O43310	598 aa	Known RBP	11.49	□□□□□ -0.57
CD163-208	ENST00000539632	MAFK	O60675	156 aa		11.49	□□□□□ -0.57
CD163-208	ENST00000539632	OPHN1	O60890	802 aa		11.49	□□□□□ -0.57
CD163-208	ENST00000539632	IFNB1	P01574	187 aa		11.49	□□□□□ -0.57
CD163-208	ENST00000539632	KRT14	P02533	472 aa		11.49	□□□□□ -0.57
CD163-208	ENST00000539632	RHOXF2B	P0C7M4	288 aa		11.49	□□□□□ -0.57
CD163-208	ENST00000539632	TYR	P14679	529 aa		11.49	□□□□□ -0.57
CD163-208	ENST00000539632	RBL1	P28749	1068 aa		11.49	□□□□□ -0.57
CD163-208	ENST00000539632	PTGIR	P43119	386 aa		11.49	□□□□□ -0.57
CD163-208	ENST00000539632	RENBP	P51606	427 aa		11.49	□□□□□ -0.57
CD163-208	ENST00000539632	IRAK1	P51617	712 aa		11.49	□□□□□ -0.57
CD163-208	ENST00000539632	SGSH	P51688	502 aa		11.49	□□□□□ -0.57
CD163-208	ENST00000539632	CALCOCO2	Q13137	446 aa		11.49	□□□□□ -0.57
CD163-208	ENST00000539632	RFTN1	Q14699	578 aa	Predicted RBP	11.49	□□□□□ -0.57
CD163-208	ENST00000539632	DHCR24	Q15392	516 aa		11.49	□□□□□ -0.57
CD163-208	ENST00000539632	EML3	Q32P44	896 aa		11.49	□□□□□ -0.57
CD163-208	ENST00000539632	LEXM	Q3ZCV2	418 aa		11.49	□□□□□ -0.57
CD163-208	ENST00000539632	LY6G5C	Q5SRR4	150 aa		11.49	□□□□□ -0.57
CD163-208	ENST00000539632	IL31	Q6EBC2	164 aa		11.49	□□□□□ -0.57
CD163-208	ENST00000539632	ITPRIPL1	Q6GPH6	555 aa		11.49	□□□□□ -0.57
CD163-208	ENST00000539632	TANGO2	Q6ICL3	276 aa		11.49	□□□□□ -0.57
CD163-208	ENST00000539632	CXorf57	Q6NSI4	855 aa	Known RBP	11.49	□□□□□ -0.57
CD163-208	ENST00000539632	VIT	Q6UXI7	678 aa		11.49	□□□□□ -0.57
CD163-208	ENST00000539632	PCGF5	Q86SE9	256 aa		11.49	□□□□□ -0.57
CD163-208	ENST00000539632	DCAF4L2	Q8NA75	395 aa		11.49	□□□□□ -0.57
CD163-208	ENST00000539632	RIN3	Q8TB24	985 aa		11.49	□□□□□ -0.57
CD163-208	ENST00000539632	ACD	Q96AP0	544 aa		11.49	□□□□□ -0.57
CD163-208	ENST00000539632	MYEOV	Q96EZ4	313 aa		11.49	□□□□□ -0.57
CD163-208	ENST00000539632	HMCES	Q96FZ2	354 aa		11.49	□□□□□ -0.57
CD163-208	ENST00000539632	LGMN	Q99538	433 aa		11.49	□□□□□ -0.57
CD163-208	ENST00000539632	RHOXF2	Q9BQY4	288 aa		11.49	□□□□□ -0.57
CD163-208	ENST00000539632	ERP44	Q9BS26	406 aa		11.49	□□□□□ -0.57
CD163-208	ENST00000539632	C2orf49	Q9BVC5	232 aa	Predicted RBP	11.49	□□□□□ -0.57
CD163-208	ENST00000539632	TRMT61B	Q9BVS5	477 aa	Known RBP	11.49	□□□□□ -0.57
CD163-208	ENST00000539632	ATP13A1	Q9HD20	1204 aa		11.49	□□□□□ -0.57
CD163-208	ENST00000539632	FAM114A2	Q9NRY5	505 aa		11.49	□□□□□ -0.57
CD163-208	ENST00000539632	NDFIP2	Q9NV92	336 aa		11.49	□□□□□ -0.57
CD163-208	ENST00000539632	IPO11	Q9UI26	975 aa	Known RBP	11.49	□□□□□ -0.57
CD163-208	ENST00000539632	TRIOBP	Q9H2D6	2365 aa		11.49	□□□□□ -0.57
CD163-208	ENST00000539632		A0A0A0MRY4	1105 aa		11.48	□□□□□ -0.57
CD163-208	ENST00000539632	GOLGA6C	A6NDK9	693 aa		11.48	□□□□□ -0.57
CD163-208	ENST00000539632	GOLGA6B	A6NDN3	693 aa		11.48	□□□□□ -0.57
CD163-208	ENST00000539632	GRXCR2	A6NFK2	248 aa		11.48	□□□□□ -0.57
CD163-208	ENST00000539632	PALM2-AKAP2	B1ALY0	433 aa	Predicted RBP	11.48	□□□□□ -0.57
CD163-208	ENST00000539632	ANHX	E9PGG2	379 aa		11.48	□□□□□ -0.57
CD163-208	ENST00000539632	KDELR3	O43731	214 aa		11.48	□□□□□ -0.57
CD163-208	ENST00000539632	CACNG3	O60359	315 aa		11.48	□□□□□ -0.57
CD163-208	ENST00000539632	GCAT	O75600	419 aa		11.48	□□□□□ -0.57
CD163-208	ENST00000539632	MAP3K6	O95382	1288 aa		11.48	□□□□□ -0.57
CD163-208	ENST00000539632	CYP17A1	P05093	508 aa		11.48	□□□□□ -0.57
CD163-208	ENST00000539632	GOLGA6D	P0CG33	693 aa		11.48	□□□□□ -0.57
CD163-208	ENST00000539632	PLK1	P53350	603 aa		11.48	□□□□□ -0.57
CD163-208	ENST00000539632	DRG2	P55039	364 aa	Known RBP	11.48	□□□□□ -0.57
CD163-208	ENST00000539632	IFI35	P80217	286 aa	Predicted RBP	11.48	□□□□□ -0.57
CD163-208	ENST00000539632	CAV1	Q03135	178 aa		11.48	□□□□□ -0.57
CD163-208	ENST00000539632	SULT2A1	Q06520	285 aa		11.48	□□□□□ -0.57
CD163-208	ENST00000539632	CUL1	Q13616	776 aa		11.48	□□□□□ -0.57
CD163-208	ENST00000539632	HTR4	Q13639	388 aa		11.48	□□□□□ -0.57
CD163-208	ENST00000539632	HNRNPD	Q14103	355 aa	Known RBP	11.48	□□□□□ -0.57
CD163-208	ENST00000539632	E2F5	Q15329	346 aa		11.48	□□□□□ -0.57
CD163-208	ENST00000539632	SMAD2	Q15796	467 aa	Known RBP	11.48	□□□□□ -0.57
CD163-208	ENST00000539632	ERCC6L	Q2NKX8	1250 aa		11.48	□□□□□ -0.57
CD163-208	ENST00000539632	RNF219	Q5W0B1	726 aa	Predicted RBP	11.48	□□□□□ -0.57
CD163-208	ENST00000539632	RETSAT	Q6NUM9	610 aa		11.48	□□□□□ -0.57
CD163-208	ENST00000539632	POTEH	Q6S545	545 aa		11.48	□□□□□ -0.57

Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms