RNA–Protein interactions for RNA: ENST00000539631.1

TSPAN9-207, Transcript of tetraspanin 9, humanhuman

TSL 3

Gene TSPAN9, Length 584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-207ENST00000539631 TRMT11Q7Z4G4 463 aaKnown RBP13.04□□□□□ -0.32
TSPAN9-207ENST00000539631 POLNQ7Z5Q5 900 aa13.04□□□□□ -0.32
TSPAN9-207ENST00000539631 DAAM2Q86T65 1068 aa13.04□□□□□ -0.32
TSPAN9-207ENST00000539631 CHPFQ8IZ52 775 aa13.04□□□□□ -0.32
TSPAN9-207ENST00000539631 MAML2Q8IZL2 1156 aaPredicted RBP13.04□□□□□ -0.32
TSPAN9-207ENST00000539631 TSC1Q92574 1164 aa13.04□□□□□ -0.32
TSPAN9-207ENST00000539631 ACDQ96AP0 544 aa13.04□□□□□ -0.32
TSPAN9-207ENST00000539631 CALR3Q96L12 384 aaKnown RBP13.04□□□□□ -0.32
TSPAN9-207ENST00000539631 MRGPRX3Q96LB0 322 aa13.04□□□□□ -0.32
TSPAN9-207ENST00000539631 VPS28Q9UK41 221 aa13.04□□□□□ -0.32
TSPAN9-207ENST00000539631 ERVW-1Q9UQF0 538 aa13.04□□□□□ -0.32
TSPAN9-207ENST00000539631 RAD54BQ9Y620 910 aa13.04□□□□□ -0.32
TSPAN9-207ENST00000539631 STON1Q9Y6Q2 735 aa13.04□□□□□ -0.32
TSPAN9-207ENST00000539631 NUP205Q92621 2012 aa13.04□□□□□ -0.32
TSPAN9-207ENST00000539631 CKAP5Q14008 2032 aa13.03□□□□□ -0.32
TSPAN9-207ENST00000539631 GRID2IPA4D2P6 1211 aa13.03□□□□□ -0.32
TSPAN9-207ENST00000539631 GALR2O43603 387 aaPredicted RBP13.03□□□□□ -0.32
TSPAN9-207ENST00000539631 SNAP91O60641 907 aa13.03□□□□□ -0.32
TSPAN9-207ENST00000539631 ASLP04424 464 aa13.03□□□□□ -0.32
TSPAN9-207ENST00000539631 CCDC175P0C221 793 aa13.03□□□□□ -0.32
TSPAN9-207ENST00000539631 HOXB2P14652 356 aa13.03□□□□□ -0.32
TSPAN9-207ENST00000539631 GLDCP23378 1020 aa13.03□□□□□ -0.32
TSPAN9-207ENST00000539631 KDELR1P24390 212 aa13.03□□□□□ -0.32
TSPAN9-207ENST00000539631 IL4RP24394 825 aa13.03□□□□□ -0.32
TSPAN9-207ENST00000539631 PRKCHP24723 683 aa13.03□□□□□ -0.32
TSPAN9-207ENST00000539631 ECT2LQ008S8 904 aa13.03□□□□□ -0.32
TSPAN9-207ENST00000539631 ENPP2Q13822 863 aa13.03□□□□□ -0.32
TSPAN9-207ENST00000539631 DPYSL3Q14195 570 aa13.03□□□□□ -0.32
TSPAN9-207ENST00000539631 SDE2Q6IQ49 451 aa13.03□□□□□ -0.32
TSPAN9-207ENST00000539631 ZNF783Q6ZMS7 281 aa13.03□□□□□ -0.32
TSPAN9-207ENST00000539631 RHOT1Q8IXI2 618 aa13.03□□□□□ -0.32
TSPAN9-207ENST00000539631 KCTD6Q8NC69 237 aa13.03□□□□□ -0.32
TSPAN9-207ENST00000539631 RAPGEF5Q92565 580 aa13.03□□□□□ -0.32
TSPAN9-207ENST00000539631 ARHGEF2Q92974 986 aaKnown RBP13.03□□□□□ -0.32
TSPAN9-207ENST00000539631 ERLEC1Q96DZ1 483 aa13.03□□□□□ -0.32
TSPAN9-207ENST00000539631 MYO19Q96H55 970 aa13.03□□□□□ -0.32
TSPAN9-207ENST00000539631 RPL10LQ96L21 214 aaKnown RBP13.03□□□□□ -0.32
TSPAN9-207ENST00000539631 CSPG4P5Q96PW8 444 aa13.03□□□□□ -0.32
TSPAN9-207ENST00000539631 PPP1R9BQ96SB3 815 aa13.03□□□□□ -0.32
TSPAN9-207ENST00000539631 SPON2Q9BUD6 331 aa13.03□□□□□ -0.32
TSPAN9-207ENST00000539631 NOL6Q9H6R4 1146 aaKnown RBP13.03□□□□□ -0.32
TSPAN9-207ENST00000539631 PRMT8Q9NR22 394 aaPredicted RBP13.03□□□□□ -0.32
TSPAN9-207ENST00000539631 ETNK2Q9NVF9 386 aa13.03□□□□□ -0.32
TSPAN9-207ENST00000539631 PLA2G4CQ9UP65 541 aa13.03□□□□□ -0.32
TSPAN9-207ENST00000539631 SLC8A2Q9UPR5 921 aa13.03□□□□□ -0.32
TSPAN9-207ENST00000539631 MFHAS1Q9Y4C4 1052 aa13.03□□□□□ -0.32
TSPAN9-207ENST00000539631 EML5Q05BV3 1969 aa13.02□□□□□ -0.32
TSPAN9-207ENST00000539631 K7ESF4 209 aa13.02□□□□□ -0.33
TSPAN9-207ENST00000539631 DCLK1O15075 740 aa13.02□□□□□ -0.33
TSPAN9-207ENST00000539631 NPC1O15118 1278 aa13.02□□□□□ -0.33
TSPAN9-207ENST00000539631 RAMP2O60895 175 aa13.02□□□□□ -0.33
TSPAN9-207ENST00000539631 KRT1P04264 644 aa13.02□□□□□ -0.33
TSPAN9-207ENST00000539631 SRPRAP08240 638 aaKnown RBP13.02□□□□□ -0.33
TSPAN9-207ENST00000539631 HLA-EP13747 358 aa13.02□□□□□ -0.33
TSPAN9-207ENST00000539631 STK19P49842 368 aaPredicted RBP13.02□□□□□ -0.33
TSPAN9-207ENST00000539631 NUBP1P53384 320 aa13.02□□□□□ -0.33
TSPAN9-207ENST00000539631 CSTF1Q05048 431 aaKnown RBP13.02□□□□□ -0.33
TSPAN9-207ENST00000539631 SULT2A1Q06520 285 aa13.02□□□□□ -0.33
TSPAN9-207ENST00000539631 CCDC173Q0VFZ6 552 aa13.02□□□□□ -0.33
TSPAN9-207ENST00000539631 POLD3Q15054 466 aaPredicted RBP13.02□□□□□ -0.33
TSPAN9-207ENST00000539631 PDK2Q15119 407 aa13.02□□□□□ -0.33
TSPAN9-207ENST00000539631 E2F5Q15329 346 aa13.02□□□□□ -0.33
TSPAN9-207ENST00000539631 ANGPT1Q15389 498 aa13.02□□□□□ -0.33
TSPAN9-207ENST00000539631 CRY1Q16526 586 aa13.02□□□□□ -0.33
TSPAN9-207ENST00000539631 IFI16Q16666 785 aaKnown RBP13.02□□□□□ -0.33
TSPAN9-207ENST00000539631 LRRC38Q5VT99 294 aa13.02□□□□□ -0.33
TSPAN9-207ENST00000539631 IL31Q6EBC2 164 aa13.02□□□□□ -0.33
TSPAN9-207ENST00000539631 KIAA1211LQ6NV74 962 aa13.02□□□□□ -0.33
TSPAN9-207ENST00000539631 SERPINA13PQ6UXR4 307 aa13.02□□□□□ -0.33
TSPAN9-207ENST00000539631 ZNF366Q8N895 744 aa13.02□□□□□ -0.33
TSPAN9-207ENST00000539631 LRRC57Q8N9N7 239 aa13.02□□□□□ -0.33
TSPAN9-207ENST00000539631 DCAF4L2Q8NA75 395 aa13.02□□□□□ -0.33
TSPAN9-207ENST00000539631 NETO2Q8NC67 525 aa13.02□□□□□ -0.33
TSPAN9-207ENST00000539631 PRSS33Q8NF86 280 aa13.02□□□□□ -0.33
TSPAN9-207ENST00000539631 KIAA1524Q8TCG1 905 aa13.02□□□□□ -0.33
TSPAN9-207ENST00000539631 CELF6Q96J87 481 aaKnown RBP13.02□□□□□ -0.33
TSPAN9-207ENST00000539631 HHIPQ96QV1 700 aa13.02□□□□□ -0.33
TSPAN9-207ENST00000539631 GABRG3Q99928 467 aa13.02□□□□□ -0.33
TSPAN9-207ENST00000539631 CALN1Q9BXU9 219 aa13.02□□□□□ -0.33
TSPAN9-207ENST00000539631 ACE2Q9BYF1 805 aaPredicted RBP13.02□□□□□ -0.33
TSPAN9-207ENST00000539631 TSGA10Q9BZW7 698 aa13.02□□□□□ -0.33
TSPAN9-207ENST00000539631 SLC39A8Q9C0K1 460 aa13.02□□□□□ -0.33
TSPAN9-207ENST00000539631 KLC2Q9H0B6 622 aa13.02□□□□□ -0.33
TSPAN9-207ENST00000539631 MAGEH1Q9H213 219 aa13.02□□□□□ -0.33
TSPAN9-207ENST00000539631 TMEM245Q9H330 911 aa13.02□□□□□ -0.33
TSPAN9-207ENST00000539631 MTG2Q9H4K7 406 aa13.02□□□□□ -0.33
TSPAN9-207ENST00000539631 ATP13A1Q9HD20 1204 aa13.02□□□□□ -0.33
TSPAN9-207ENST00000539631 DDX56Q9NY93 547 aaKnown RBP13.02□□□□□ -0.33
TSPAN9-207ENST00000539631 RCOR3Q9P2K3 495 aaPredicted RBP13.02□□□□□ -0.33
TSPAN9-207ENST00000539631 VPS51Q9UID3 782 aa13.02□□□□□ -0.33
TSPAN9-207ENST00000539631 SLCO3A1Q9UIG8 710 aa13.02□□□□□ -0.33
TSPAN9-207ENST00000539631 SLC25A13Q9UJS0 675 aa13.02□□□□□ -0.33
TSPAN9-207ENST00000539631 GUCA1BQ9UMX6 200 aa13.02□□□□□ -0.33
TSPAN9-207ENST00000539631 PPP2R2CQ9Y2T4 447 aa13.02□□□□□ -0.33
TSPAN9-207ENST00000539631 CAPN6Q9Y6Q1 641 aa13.02□□□□□ -0.33
TSPAN9-207ENST00000539631 ZNF318Q5VUA4 2279 aa13.01□□□□□ -0.33
TSPAN9-207ENST00000539631 A0A1W2PQF6 199 aa13.01□□□□□ -0.33
TSPAN9-207ENST00000539631 LRRD1A4D1F6 860 aa13.01□□□□□ -0.33
TSPAN9-207ENST00000539631 C3orf70A6NLC5 250 aaPredicted RBP13.01□□□□□ -0.33
TSPAN9-207ENST00000539631 RASA4BC9J798 803 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms