RNA–Protein interactions for RNA: ENST00000539097.2

HIF1A-204, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,956 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-204ENST00000539097 IL17DQ8TAD2 202 aa1.15□□□□□ -2.23
HIF1A-204ENST00000539097 CACTINQ8WUQ7 758 aaKnown RBP1.15□□□□□ -2.23
HIF1A-204ENST00000539097 RFKQ969G6 155 aa1.15□□□□□ -2.23
HIF1A-204ENST00000539097 TMEM125Q96AQ2 219 aa1.15□□□□□ -2.23
HIF1A-204ENST00000539097 ZSCAN31Q96LW9 406 aaPredicted RBP1.15□□□□□ -2.23
HIF1A-204ENST00000539097 CPPED1Q9BRF8 314 aaPredicted RBP1.15□□□□□ -2.23
HIF1A-204ENST00000539097 SH2D3AQ9BRG2 576 aa1.15□□□□□ -2.23
HIF1A-204ENST00000539097 TRMOQ9BU70 441 aa1.15□□□□□ -2.23
HIF1A-204ENST00000539097 SCNM1Q9BWG6 230 aa1.15□□□□□ -2.23
HIF1A-204ENST00000539097 FRMD8Q9BZ67 464 aaPredicted RBP1.15□□□□□ -2.23
HIF1A-204ENST00000539097 ANKRD2Q9GZV1 360 aa1.15□□□□□ -2.23
HIF1A-204ENST00000539097 SLC25A18Q9H1K4 315 aa1.15□□□□□ -2.23
HIF1A-204ENST00000539097 ACAD9Q9H845 621 aa1.15□□□□□ -2.23
HIF1A-204ENST00000539097 SNX15Q9NRS6 342 aa1.15□□□□□ -2.23
HIF1A-204ENST00000539097 POLG2Q9UHN1 485 aa1.15□□□□□ -2.23
HIF1A-204ENST00000539097 ZNF112Q9UJU3 913 aa1.15□□□□□ -2.23
HIF1A-204ENST00000539097 RAB21Q9UL25 225 aa1.15□□□□□ -2.23
HIF1A-204ENST00000539097 CNOT6Q9ULM6 557 aaKnown RBP1.15□□□□□ -2.23
HIF1A-204ENST00000539097 USP22Q9UPT9 525 aa1.15□□□□□ -2.23
HIF1A-204ENST00000539097 RNF114Q9Y508 228 aa1.15□□□□□ -2.23
HIF1A-204ENST00000539097 A8MXE2 369 aa1.15□□□□□ -2.23
HIF1A-204ENST00000539097 TSPAN4O14817 238 aa1.15□□□□□ -2.23
HIF1A-204ENST00000539097 INPPL1O15357 1258 aa1.15□□□□□ -2.23
HIF1A-204ENST00000539097 TNFSF14O43557 240 aa1.15□□□□□ -2.23
HIF1A-204ENST00000539097 CLEC3BP05452 202 aa1.15□□□□□ -2.23
HIF1A-204ENST00000539097 CYP2D6P10635 497 aa1.15□□□□□ -2.23
HIF1A-204ENST00000539097 GP1BBP13224 206 aa1.15□□□□□ -2.23
HIF1A-204ENST00000539097 INSRRP14616 1297 aa1.15□□□□□ -2.23
HIF1A-204ENST00000539097 CERS1P27544 350 aa1.15□□□□□ -2.23
HIF1A-204ENST00000539097 CTGFP29279 349 aa1.15□□□□□ -2.23
HIF1A-204ENST00000539097 TM4SF1P30408 202 aa1.15□□□□□ -2.23
HIF1A-204ENST00000539097 UQCRC1P31930 480 aa1.15□□□□□ -2.23
HIF1A-204ENST00000539097 CNR2P34972 360 aa1.15□□□□□ -2.23
HIF1A-204ENST00000539097 PLA2G5P39877 138 aa1.15□□□□□ -2.23
HIF1A-204ENST00000539097 RPS6KA3P51812 740 aa1.15□□□□□ -2.23
HIF1A-204ENST00000539097 NAGLUP54802 743 aa1.15□□□□□ -2.23
HIF1A-204ENST00000539097 PSG6Q00889 435 aa1.15□□□□□ -2.23
HIF1A-204ENST00000539097 B4GALNT1Q00973 533 aa1.15□□□□□ -2.23
HIF1A-204ENST00000539097 MST1RQ04912 1400 aa1.15□□□□□ -2.23
HIF1A-204ENST00000539097 UBE3AQ05086 875 aa1.15□□□□□ -2.23
HIF1A-204ENST00000539097 SLC10A2Q12908 348 aaPredicted RBP1.15□□□□□ -2.23
HIF1A-204ENST00000539097 GPS1Q13098 491 aa1.15□□□□□ -2.23
HIF1A-204ENST00000539097 CDSNQ15517 529 aa1.15□□□□□ -2.23
HIF1A-204ENST00000539097 ALG11Q2TAA5 492 aa1.15□□□□□ -2.23
HIF1A-204ENST00000539097 BEAN1Q3B7T3 259 aa1.15□□□□□ -2.23
HIF1A-204ENST00000539097 DUSP28Q4G0W2 176 aa1.15□□□□□ -2.23
HIF1A-204ENST00000539097 RNASE12Q5GAN4 147 aaKnown RBP1.15□□□□□ -2.23
HIF1A-204ENST00000539097 RABL3Q5HYI8 236 aa1.15□□□□□ -2.23
HIF1A-204ENST00000539097 ZNF585AQ6P3V2 769 aa1.15□□□□□ -2.23
HIF1A-204ENST00000539097 TMEM154Q6P9G4 183 aa1.15□□□□□ -2.23
HIF1A-204ENST00000539097 FAM47EQ6ZV65 393 aa1.15□□□□□ -2.23
HIF1A-204ENST00000539097 MAPKAPK5Q8IW41 473 aa1.15□□□□□ -2.23
HIF1A-204ENST00000539097 UEVLDQ8IX04 471 aa1.15□□□□□ -2.23
HIF1A-204ENST00000539097 NGEFQ8N5V2 710 aa1.15□□□□□ -2.23
HIF1A-204ENST00000539097 ZBTB8BQ8NAP8 495 aaPredicted RBP1.15□□□□□ -2.23
HIF1A-204ENST00000539097 Q8TCH9 128 aa1.15□□□□□ -2.23
HIF1A-204ENST00000539097 C2CD4CQ8TF44 421 aa1.15□□□□□ -2.23
HIF1A-204ENST00000539097 ASB10Q8WXI3 467 aa1.15□□□□□ -2.23
HIF1A-204ENST00000539097 DVL3Q92997 716 aaPredicted RBP1.15□□□□□ -2.23
HIF1A-204ENST00000539097 TRIM63Q969Q1 353 aa1.15□□□□□ -2.23
HIF1A-204ENST00000539097 SCRN2Q96FV2 425 aa1.15□□□□□ -2.23
HIF1A-204ENST00000539097 UROC1Q96N76 676 aa1.15□□□□□ -2.23
HIF1A-204ENST00000539097 BBC3Q96PG8 261 aaPredicted RBP1.15□□□□□ -2.23
HIF1A-204ENST00000539097 SNX18Q96RF0 628 aa1.15□□□□□ -2.23
HIF1A-204ENST00000539097 PYM1Q9BRP8 204 aaKnown RBP1.15□□□□□ -2.23
HIF1A-204ENST00000539097 CTDSP1Q9GZU7 261 aa1.15□□□□□ -2.23
HIF1A-204ENST00000539097 PAIP1Q9H074 479 aaKnown RBP1.15□□□□□ -2.23
HIF1A-204ENST00000539097 CLPBQ9H078 707 aa1.15□□□□□ -2.23
HIF1A-204ENST00000539097 PRKRIP1Q9H875 184 aaPredicted RBP1.15□□□□□ -2.23
HIF1A-204ENST00000539097 FKRPQ9H9S5 495 aa1.15□□□□□ -2.23
HIF1A-204ENST00000539097 BICRAQ9NZM4 1560 aa1.15□□□□□ -2.23
HIF1A-204ENST00000539097 ST6GALNAC2Q9UJ37 374 aa1.15□□□□□ -2.23
HIF1A-204ENST00000539097 FBXO4Q9UKT5 387 aa1.15□□□□□ -2.23
HIF1A-204ENST00000539097 TRPC5Q9UL62 973 aaPredicted RBP1.15□□□□□ -2.23
HIF1A-204ENST00000539097 VPS4AQ9UN37 437 aa1.15□□□□□ -2.23
HIF1A-204ENST00000539097 ENTPD2Q9Y5L3 495 aa1.15□□□□□ -2.23
HIF1A-204ENST00000539097 RAI2Q9Y5P3 530 aa1.15□□□□□ -2.23
HIF1A-204ENST00000539097 COX11Q9Y6N1 276 aa1.15□□□□□ -2.23
HIF1A-204ENST00000539097 IL16Q14005 1332 aa1.14□□□□□ -2.23
HIF1A-204ENST00000539097 PGPEP1LA6NFU8 196 aa1.14□□□□□ -2.23
HIF1A-204ENST00000539097 GLOD5A6NK44 160 aa1.14□□□□□ -2.23
HIF1A-204ENST00000539097 USP17L23D6RBM5 183 aa1.14□□□□□ -2.23
HIF1A-204ENST00000539097 AP4M1O00189 453 aa1.14□□□□□ -2.23
HIF1A-204ENST00000539097 CYR61O00622 381 aa1.14□□□□□ -2.23
HIF1A-204ENST00000539097 SYN3O14994 580 aa1.14□□□□□ -2.23
HIF1A-204ENST00000539097 WDR46O15213 610 aaKnown RBP1.14□□□□□ -2.23
HIF1A-204ENST00000539097 TMCC2O75069 709 aa1.14□□□□□ -2.23
HIF1A-204ENST00000539097 PIAS2O75928 621 aa1.14□□□□□ -2.23
HIF1A-204ENST00000539097 ENO1P06733 434 aaKnown RBP1.14□□□□□ -2.23
HIF1A-204ENST00000539097 CHRM4P08173 479 aa1.14□□□□□ -2.23
HIF1A-204ENST00000539097 HSPA1AP0DMV8 641 aaKnown RBP1.14□□□□□ -2.23
HIF1A-204ENST00000539097 HSPA1BP0DMV9 641 aaKnown RBP1.14□□□□□ -2.23
HIF1A-204ENST00000539097 HKR1P10072 659 aa1.14□□□□□ -2.23
HIF1A-204ENST00000539097 TMEM11P17152 192 aa1.14□□□□□ -2.23
HIF1A-204ENST00000539097 TPH1P17752 444 aa1.14□□□□□ -2.23
HIF1A-204ENST00000539097 ITGALP20701 1170 aa1.14□□□□□ -2.23
HIF1A-204ENST00000539097 DRD1P21728 446 aa1.14□□□□□ -2.23
HIF1A-204ENST00000539097 DRD4P21917 467 aa1.14□□□□□ -2.23
HIF1A-204ENST00000539097 AVPR2P30518 371 aa1.14□□□□□ -2.23
HIF1A-204ENST00000539097 ACTN2P35609 894 aa1.14□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms