RNA–Protein interactions for RNA: ENST00000538177.5

SLC28A1-204, Transcript of solute carrier family 28 member 1, humanhuman

TSL 2 BASIC

Gene SLC28A1, Length 2,155 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-204ENST00000538177 STX3Q13277 289 aa11.66□□□□□ -0.54
SLC28A1-204ENST00000538177 KRT72Q14CN4 511 aa11.66□□□□□ -0.54
SLC28A1-204ENST00000538177 HSF5Q4G112 596 aaPredicted RBP11.66□□□□□ -0.54
SLC28A1-204ENST00000538177 TEDDM1Q5T9Z0 273 aa11.66□□□□□ -0.54
SLC28A1-204ENST00000538177 N4BP2L1Q5TBK1 243 aaPredicted RBP11.66□□□□□ -0.54
SLC28A1-204ENST00000538177 MAP3K21Q5TCX8 1036 aa11.66□□□□□ -0.54
SLC28A1-204ENST00000538177 NAPEPLDQ6IQ20 393 aa11.66□□□□□ -0.54
SLC28A1-204ENST00000538177 DDX51Q8N8A6 666 aaKnown RBP eCLIP11.66□□□□□ -0.54
SLC28A1-204ENST00000538177 CASP10Q92851 521 aa11.66□□□□□ -0.54
SLC28A1-204ENST00000538177 PTCD3Q96EY7 689 aaKnown RBP11.66□□□□□ -0.54
SLC28A1-204ENST00000538177 RBBP8Q99708 897 aa11.66□□□□□ -0.54
SLC28A1-204ENST00000538177 TBC1D10AQ9BXI6 508 aa11.66□□□□□ -0.54
SLC28A1-204ENST00000538177 ZCWPW1Q9H0M4 648 aa11.66□□□□□ -0.54
SLC28A1-204ENST00000538177 THAP1Q9NVV9 213 aa11.66□□□□□ -0.54
SLC28A1-204ENST00000538177 IL1RAPL1Q9NZN1 696 aa11.66□□□□□ -0.54
SLC28A1-204ENST00000538177 SOX13Q9UN79 622 aa11.66□□□□□ -0.54
SLC28A1-204ENST00000538177 A8MUI8 341 aa11.65□□□□□ -0.54
SLC28A1-204ENST00000538177 KCNU1A8MYU2 1149 aa11.65□□□□□ -0.54
SLC28A1-204ENST00000538177 WFS1O76024 890 aa11.65□□□□□ -0.54
SLC28A1-204ENST00000538177 PRKCGP05129 697 aa11.65□□□□□ -0.54
SLC28A1-204ENST00000538177 LIMK2P53671 638 aa11.65□□□□□ -0.54
SLC28A1-204ENST00000538177 NRG1Q02297 640 aaPredicted RBP11.65□□□□□ -0.54
SLC28A1-204ENST00000538177 CDH17Q12864 832 aa11.65□□□□□ -0.54
SLC28A1-204ENST00000538177 MBTPS1Q14703 1052 aa11.65□□□□□ -0.54
SLC28A1-204ENST00000538177 FASTKD1Q53R41 847 aaKnown RBP11.65□□□□□ -0.54
SLC28A1-204ENST00000538177 NOMO2Q5JPE7 1267 aa11.65□□□□□ -0.54
SLC28A1-204ENST00000538177 CLLU1OSQ5K130 101 aa11.65□□□□□ -0.54
SLC28A1-204ENST00000538177 WLSQ5T9L3 541 aa11.65□□□□□ -0.54
SLC28A1-204ENST00000538177 MBLAC2Q68D91 279 aa11.65□□□□□ -0.54
SLC28A1-204ENST00000538177 C16orf46Q6P387 395 aa11.65□□□□□ -0.54
SLC28A1-204ENST00000538177 LINC00523Q86TU6 105 aa11.65□□□□□ -0.54
SLC28A1-204ENST00000538177 CRLF3Q8IUI8 442 aa11.65□□□□□ -0.54
SLC28A1-204ENST00000538177 COLGALT2Q8IYK4 626 aa11.65□□□□□ -0.54
SLC28A1-204ENST00000538177 LINC01599Q8WXQ3 324 aa11.65□□□□□ -0.54
SLC28A1-204ENST00000538177 TBC1D31Q96DN5 1066 aa11.65□□□□□ -0.54
SLC28A1-204ENST00000538177 NSL1Q96IY1 281 aa11.65□□□□□ -0.54
SLC28A1-204ENST00000538177 FCRL2Q96LA5 508 aaPredicted RBP11.65□□□□□ -0.54
SLC28A1-204ENST00000538177 PGLYRP2Q96PD5 576 aa11.65□□□□□ -0.54
SLC28A1-204ENST00000538177 IL12RB2Q99665 862 aa11.65□□□□□ -0.54
SLC28A1-204ENST00000538177 C20orf27Q9GZN8 174 aa11.65□□□□□ -0.54
SLC28A1-204ENST00000538177 CATSPERBQ9H7T0 1116 aa11.65□□□□□ -0.54
SLC28A1-204ENST00000538177 ZNF395Q9H8N7 513 aaPredicted RBP11.65□□□□□ -0.54
SLC28A1-204ENST00000538177 NMUR1Q9HB89 426 aa11.65□□□□□ -0.54
SLC28A1-204ENST00000538177 FBXO6Q9NRD1 293 aaPredicted RBP11.65□□□□□ -0.54
SLC28A1-204ENST00000538177 SFMBT1Q9UHJ3 866 aa11.65□□□□□ -0.54
SLC28A1-204ENST00000538177 CCDC195A0A1B0GUA6 201 aa11.65□□□□□ -0.54
SLC28A1-204ENST00000538177 DFFAO00273 331 aa11.65□□□□□ -0.54
SLC28A1-204ENST00000538177 ATP9BO43861 1147 aa11.65□□□□□ -0.54
SLC28A1-204ENST00000538177 MAFKO60675 156 aa11.65□□□□□ -0.54
SLC28A1-204ENST00000538177 PROCP04070 461 aa11.65□□□□□ -0.54
SLC28A1-204ENST00000538177 OR4Q2P0C623 313 aa11.65□□□□□ -0.54
SLC28A1-204ENST00000538177 TYK2P29597 1187 aa11.65□□□□□ -0.54
SLC28A1-204ENST00000538177 PREPLQ4J6C6 727 aaPredicted RBP11.65□□□□□ -0.54
SLC28A1-204ENST00000538177 SLC39A12Q504Y0 691 aa11.65□□□□□ -0.54
SLC28A1-204ENST00000538177 AFMIDQ63HM1 303 aa11.65□□□□□ -0.54
SLC28A1-204ENST00000538177 ARHGAP36Q6ZRI8 547 aa11.65□□□□□ -0.54
SLC28A1-204ENST00000538177 OTOP3Q7RTS5 596 aa11.65□□□□□ -0.54
SLC28A1-204ENST00000538177 ARID3BQ8IVW6 561 aaPredicted RBP11.65□□□□□ -0.54
SLC28A1-204ENST00000538177 DCP1BQ8IZD4 617 aaKnown RBP11.65□□□□□ -0.54
SLC28A1-204ENST00000538177 DCLK2Q8N568 766 aa11.65□□□□□ -0.54
SLC28A1-204ENST00000538177 AGAP11Q8TF27 550 aa11.65□□□□□ -0.54
SLC28A1-204ENST00000538177 MFSD3Q96ES6 412 aa11.65□□□□□ -0.54
SLC28A1-204ENST00000538177 FUBP3Q96I24 572 aaKnown RBP eCLIP11.65□□□□□ -0.54
SLC28A1-204ENST00000538177 FCRL5Q96RD9 977 aa11.65□□□□□ -0.54
SLC28A1-204ENST00000538177 APOL2Q9BQE5 337 aa11.65□□□□□ -0.54
SLC28A1-204ENST00000538177 MCMBPQ9BTE3 642 aa11.65□□□□□ -0.54
SLC28A1-204ENST00000538177 KIFC1Q9BW19 673 aa11.65□□□□□ -0.54
SLC28A1-204ENST00000538177 SNX15Q9NRS6 342 aa11.65□□□□□ -0.54
SLC28A1-204ENST00000538177 ARL8BQ9NVJ2 186 aa11.65□□□□□ -0.54
SLC28A1-204ENST00000538177 SCML2Q9UQR0 700 aa11.65□□□□□ -0.54
SLC28A1-204ENST00000538177 AAR2Q9Y312 384 aaKnown RBP11.65□□□□□ -0.54
SLC28A1-204ENST00000538177 HBS1LQ9Y450 684 aaKnown RBP11.65□□□□□ -0.54
SLC28A1-204ENST00000538177 DNAH12Q6ZR08 3092 aa11.65□□□□□ -0.55
SLC28A1-204ENST00000538177 A0A1W2PQH9 124 aa11.64□□□□□ -0.55
SLC28A1-204ENST00000538177 C2orf71A6NGG8 1288 aa11.64□□□□□ -0.55
SLC28A1-204ENST00000538177 FCHO1O14526 889 aa11.64□□□□□ -0.55
SLC28A1-204ENST00000538177 MATN3O15232 486 aa11.64□□□□□ -0.55
SLC28A1-204ENST00000538177 MSI1O43347 362 aaKnown RBP11.64□□□□□ -0.55
SLC28A1-204ENST00000538177 ATP5BP06576 529 aaKnown RBP11.64□□□□□ -0.55
SLC28A1-204ENST00000538177 FGF3P11487 239 aaPredicted RBP11.64□□□□□ -0.55
SLC28A1-204ENST00000538177 CCND1P24385 295 aa11.64□□□□□ -0.55
SLC28A1-204ENST00000538177 CSE1LP55060 971 aaKnown RBP11.64□□□□□ -0.55
SLC28A1-204ENST00000538177 IRX4P78413 519 aa11.64□□□□□ -0.55
SLC28A1-204ENST00000538177 SP3Q02447 781 aa11.64□□□□□ -0.55
SLC28A1-204ENST00000538177 NFE2Q16621 373 aaPredicted RBP11.64□□□□□ -0.55
SLC28A1-204ENST00000538177 PPM1JQ5JR12 505 aa11.64□□□□□ -0.55
SLC28A1-204ENST00000538177 FSTL4Q6MZW2 842 aa11.64□□□□□ -0.55
SLC28A1-204ENST00000538177 MSANTD2Q6P1R3 559 aa11.64□□□□□ -0.55
SLC28A1-204ENST00000538177 STRA8Q7Z7C7 330 aa11.64□□□□□ -0.55
SLC28A1-204ENST00000538177 MON1AQ86VX9 555 aa11.64□□□□□ -0.55
SLC28A1-204ENST00000538177 LONP2Q86WA8 852 aa11.64□□□□□ -0.55
SLC28A1-204ENST00000538177 LRRC49Q8IUZ0 686 aa11.64□□□□□ -0.55
SLC28A1-204ENST00000538177 SCN4BQ8IWT1 228 aa11.64□□□□□ -0.55
SLC28A1-204ENST00000538177 ATPAF2Q8N5M1 289 aa11.64□□□□□ -0.55
SLC28A1-204ENST00000538177 URGCPQ8TCY9 931 aa11.64□□□□□ -0.55
SLC28A1-204ENST00000538177 C8orf48Q96LL4 319 aa11.64□□□□□ -0.55
SLC28A1-204ENST00000538177 C1orf74Q96LT6 269 aa11.64□□□□□ -0.55
SLC28A1-204ENST00000538177 SERPINB11Q96P15 392 aa11.64□□□□□ -0.55
SLC28A1-204ENST00000538177 AGAP2Q99490 1192 aa11.64□□□□□ -0.55
SLC28A1-204ENST00000538177 SLC39A8Q9C0K1 460 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms