RNA–Protein interactions for RNA: ENST00000536708.6

CDK5RAP3-202, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2 BASIC

Gene CDK5RAP3, Length 1,975 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-202ENST00000536708 DNAJB7Q7Z6W7 309 aaPredicted RBP13.28□□□□□ -0.28
CDK5RAP3-202ENST00000536708 TBC1D1Q86TI0 1168 aaPredicted RBP13.28□□□□□ -0.28
CDK5RAP3-202ENST00000536708 ANKMY2Q8IV38 441 aa13.28□□□□□ -0.28
CDK5RAP3-202ENST00000536708 HS6ST3Q8IZP7 471 aa13.28□□□□□ -0.28
CDK5RAP3-202ENST00000536708 PDIK1LQ8N165 341 aa13.28□□□□□ -0.28
CDK5RAP3-202ENST00000536708 RNF139Q8WU17 664 aa13.28□□□□□ -0.28
CDK5RAP3-202ENST00000536708 PRUNE2Q8WUY3 3088 aa13.28□□□□□ -0.28
CDK5RAP3-202ENST00000536708 PSMG2Q969U7 264 aa13.28□□□□□ -0.28
CDK5RAP3-202ENST00000536708 RTP4Q96DX8 246 aa13.28□□□□□ -0.28
CDK5RAP3-202ENST00000536708 STAMBPL1Q96FJ0 436 aa13.28□□□□□ -0.28
CDK5RAP3-202ENST00000536708 MAK16Q9BXY0 300 aaKnown RBP13.28□□□□□ -0.28
CDK5RAP3-202ENST00000536708 EBF2Q9HAK2 575 aa13.28□□□□□ -0.28
CDK5RAP3-202ENST00000536708 KIF9Q9HAQ2 790 aa13.28□□□□□ -0.28
CDK5RAP3-202ENST00000536708 PCDH18Q9HCL0 1135 aa13.28□□□□□ -0.28
CDK5RAP3-202ENST00000536708 HCFC1R1Q9NWW0 138 aa13.28□□□□□ -0.28
CDK5RAP3-202ENST00000536708 XPO7Q9UIA9 1087 aaKnown RBP13.28□□□□□ -0.28
CDK5RAP3-202ENST00000536708 GRID1Q9ULK0 1009 aa13.28□□□□□ -0.28
CDK5RAP3-202ENST00000536708 USH1CQ9Y6N9 552 aa13.28□□□□□ -0.28
CDK5RAP3-202ENST00000536708 SHROOM3Q8TF72 1996 aa13.28□□□□□ -0.28
CDK5RAP3-202ENST00000536708 TCRBV7S3A2A0A539 114 aa13.27□□□□□ -0.28
CDK5RAP3-202ENST00000536708 C2orf78A6NCI8 922 aa13.27□□□□□ -0.28
CDK5RAP3-202ENST00000536708 ZNF487B1APH4 448 aa13.27□□□□□ -0.28
CDK5RAP3-202ENST00000536708 FAM72CH0Y354 149 aa13.27□□□□□ -0.28
CDK5RAP3-202ENST00000536708 TM9SF1O15321 606 aa13.27□□□□□ -0.28
CDK5RAP3-202ENST00000536708 CLASP2O75122 1294 aaKnown RBP13.27□□□□□ -0.28
CDK5RAP3-202ENST00000536708 SPAG6O75602 509 aa13.27□□□□□ -0.28
CDK5RAP3-202ENST00000536708 FAM155BO75949 473 aa13.27□□□□□ -0.28
CDK5RAP3-202ENST00000536708 CA4P22748 312 aa13.27□□□□□ -0.28
CDK5RAP3-202ENST00000536708 SSTR1P30872 391 aa13.27□□□□□ -0.28
CDK5RAP3-202ENST00000536708 EPHB3P54753 998 aa13.27□□□□□ -0.28
CDK5RAP3-202ENST00000536708 GAD2Q05329 585 aa13.27□□□□□ -0.28
CDK5RAP3-202ENST00000536708 RAB30Q15771 203 aa13.27□□□□□ -0.28
CDK5RAP3-202ENST00000536708 TAF12Q16514 161 aa13.27□□□□□ -0.28
CDK5RAP3-202ENST00000536708 FAM72AQ5TYM5 149 aa13.27□□□□□ -0.28
CDK5RAP3-202ENST00000536708 FAM72DQ6L9T8 149 aa13.27□□□□□ -0.28
CDK5RAP3-202ENST00000536708 FAM72BQ86X60 149 aa13.27□□□□□ -0.28
CDK5RAP3-202ENST00000536708 FBXO36Q8NEA4 188 aa13.27□□□□□ -0.28
CDK5RAP3-202ENST00000536708 DCAKDQ8WVC6 231 aa13.27□□□□□ -0.28
CDK5RAP3-202ENST00000536708 TEKT4Q8WW24 435 aa13.27□□□□□ -0.28
CDK5RAP3-202ENST00000536708 PGAP3Q96FM1 320 aaPredicted RBP13.27□□□□□ -0.28
CDK5RAP3-202ENST00000536708 SAMD11Q96NU1 681 aa13.27□□□□□ -0.28
CDK5RAP3-202ENST00000536708 FRMD8Q9BZ67 464 aaPredicted RBP13.27□□□□□ -0.28
CDK5RAP3-202ENST00000536708 FZD10Q9ULW2 581 aa13.27□□□□□ -0.28
CDK5RAP3-202ENST00000536708 MFHAS1Q9Y4C4 1052 aa13.27□□□□□ -0.28
CDK5RAP3-202ENST00000536708 BRWD1Q9NSI6 2320 aa13.27□□□□□ -0.28
CDK5RAP3-202ENST00000536708 NUP205Q92621 2012 aa13.27□□□□□ -0.28
CDK5RAP3-202ENST00000536708 ZNF840PA6NDX5 716 aa13.27□□□□□ -0.29
CDK5RAP3-202ENST00000536708 GOLGA8MH3BSY2 632 aa13.27□□□□□ -0.29
CDK5RAP3-202ENST00000536708 CHADO15335 359 aa13.27□□□□□ -0.29
CDK5RAP3-202ENST00000536708 BANF1O75531 89 aa13.27□□□□□ -0.29
CDK5RAP3-202ENST00000536708 UNC5CO95185 931 aa13.27□□□□□ -0.29
CDK5RAP3-202ENST00000536708 MOCS2O96007 188 aaPredicted RBP13.27□□□□□ -0.29
CDK5RAP3-202ENST00000536708 LRG1P02750 347 aa13.27□□□□□ -0.29
CDK5RAP3-202ENST00000536708 HMBSP08397 361 aa13.27□□□□□ -0.29
CDK5RAP3-202ENST00000536708 GJA1P17302 382 aa13.27□□□□□ -0.29
CDK5RAP3-202ENST00000536708 IL4RP24394 825 aa13.27□□□□□ -0.29
CDK5RAP3-202ENST00000536708 L1CAMP32004 1257 aa13.27□□□□□ -0.29
CDK5RAP3-202ENST00000536708 CXCR3P49682 368 aa13.27□□□□□ -0.29
CDK5RAP3-202ENST00000536708 DNAJC3Q13217 504 aa13.27□□□□□ -0.29
CDK5RAP3-202ENST00000536708 EIF4EBP2Q13542 120 aaPredicted RBP13.27□□□□□ -0.29
CDK5RAP3-202ENST00000536708 KRT81Q14533 505 aa13.27□□□□□ -0.29
CDK5RAP3-202ENST00000536708 PDK2Q15119 407 aa13.27□□□□□ -0.29
CDK5RAP3-202ENST00000536708 BOLA3Q53S33 107 aa13.27□□□□□ -0.29
CDK5RAP3-202ENST00000536708 MSANTD2Q6P1R3 559 aa13.27□□□□□ -0.29
CDK5RAP3-202ENST00000536708 PALM2Q8IXS6 379 aa13.27□□□□□ -0.29
CDK5RAP3-202ENST00000536708 C4orf33Q8N1A6 199 aa13.27□□□□□ -0.29
CDK5RAP3-202ENST00000536708 FAM71DQ8N9W8 422 aa13.27□□□□□ -0.29
CDK5RAP3-202ENST00000536708 ZNF398Q8TD17 642 aa13.27□□□□□ -0.29
CDK5RAP3-202ENST00000536708 LRRC8CQ8TDW0 803 aa13.27□□□□□ -0.29
CDK5RAP3-202ENST00000536708 FBF1Q8TES7 1133 aa13.27□□□□□ -0.29
CDK5RAP3-202ENST00000536708 KLHL29Q96CT2 875 aa13.27□□□□□ -0.29
CDK5RAP3-202ENST00000536708 TBC1D31Q96DN5 1066 aa13.27□□□□□ -0.29
CDK5RAP3-202ENST00000536708 TRMT2BQ96GJ1 504 aaKnown RBP13.27□□□□□ -0.29
CDK5RAP3-202ENST00000536708 RSRC1Q96IZ7 334 aaKnown RBP13.27□□□□□ -0.29
CDK5RAP3-202ENST00000536708 MYRFLQ96LU7 910 aa13.27□□□□□ -0.29
CDK5RAP3-202ENST00000536708 RNF157Q96PX1 679 aa13.27□□□□□ -0.29
CDK5RAP3-202ENST00000536708 PAFAH2Q99487 392 aa13.27□□□□□ -0.29
CDK5RAP3-202ENST00000536708 TKTL2Q9H0I9 626 aa13.27□□□□□ -0.29
CDK5RAP3-202ENST00000536708 C10orf88Q9H8K7 445 aa13.27□□□□□ -0.29
CDK5RAP3-202ENST00000536708 IL21Q9HBE4 155 aa13.27□□□□□ -0.29
CDK5RAP3-202ENST00000536708 CLIC5Q9NZA1 410 aa13.27□□□□□ -0.29
CDK5RAP3-202ENST00000536708 GGT7Q9UJ14 662 aa13.27□□□□□ -0.29
CDK5RAP3-202ENST00000536708 HCFC2Q9Y5Z7 792 aa13.27□□□□□ -0.29
CDK5RAP3-202ENST00000536708 CFAP69A5D8W1 941 aa13.26□□□□□ -0.29
CDK5RAP3-202ENST00000536708 LPXNO60711 386 aa13.26□□□□□ -0.29
CDK5RAP3-202ENST00000536708 GOT1P17174 413 aa13.26□□□□□ -0.29
CDK5RAP3-202ENST00000536708 KRT4P19013 534 aa13.26□□□□□ -0.29
CDK5RAP3-202ENST00000536708 KCNJ2P63252 427 aa13.26□□□□□ -0.29
CDK5RAP3-202ENST00000536708 CYP4F8P98187 520 aa13.26□□□□□ -0.29
CDK5RAP3-202ENST00000536708 KCNJ11Q14654 390 aa13.26□□□□□ -0.29
CDK5RAP3-202ENST00000536708 DPYSL2Q16555 572 aa13.26□□□□□ -0.29
CDK5RAP3-202ENST00000536708 STXBP5Q5T5C0 1151 aa13.26□□□□□ -0.29
CDK5RAP3-202ENST00000536708 HHATQ5VTY9 493 aa13.26□□□□□ -0.29
CDK5RAP3-202ENST00000536708 FAM47EQ6ZV65 393 aa13.26□□□□□ -0.29
CDK5RAP3-202ENST00000536708 BEND5Q7L4P6 421 aa13.26□□□□□ -0.29
CDK5RAP3-202ENST00000536708 TMC8Q8IU68 726 aa13.26□□□□□ -0.29
CDK5RAP3-202ENST00000536708 MAP7D3Q8IWC1 876 aa13.26□□□□□ -0.29
CDK5RAP3-202ENST00000536708 ARHGAP18Q8N392 663 aa13.26□□□□□ -0.29
CDK5RAP3-202ENST00000536708 ZNF276Q8N554 614 aa13.26□□□□□ -0.29
CDK5RAP3-202ENST00000536708 BANPQ8N9N5 519 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms