RNA–Protein interactions for RNA: ENST00000536483.1

PRKDC-207, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 834 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-207ENST00000536483 BTBD3Q9Y2F9 522 aa12.84□□□□□ -0.35
PRKDC-207ENST00000536483 ANKRD6Q9Y2G4 727 aa12.84□□□□□ -0.35
PRKDC-207ENST00000536483 ZBTB32Q9Y2Y4 487 aaPredicted RBP12.84□□□□□ -0.35
PRKDC-207ENST00000536483 PCDHGB2Q9Y5G2 931 aa12.84□□□□□ -0.35
PRKDC-207ENST00000536483 APC2O95996 2303 aa12.84□□□□□ -0.35
PRKDC-207ENST00000536483 A0A1B0GTH6 734 aa12.83□□□□□ -0.36
PRKDC-207ENST00000536483 TYW5A2RUC4 315 aaKnown RBP12.83□□□□□ -0.36
PRKDC-207ENST00000536483 FSBPO95073 299 aa12.83□□□□□ -0.36
PRKDC-207ENST00000536483 LUC7L3O95232 432 aaKnown RBP12.83□□□□□ -0.36
PRKDC-207ENST00000536483 SEMA4FO95754 770 aa12.83□□□□□ -0.36
PRKDC-207ENST00000536483 ASLP04424 464 aa12.83□□□□□ -0.36
PRKDC-207ENST00000536483 CD70P32970 193 aa12.83□□□□□ -0.36
PRKDC-207ENST00000536483 OXCT1P55809 520 aa12.83□□□□□ -0.36
PRKDC-207ENST00000536483 CENPCQ03188 943 aa12.83□□□□□ -0.36
PRKDC-207ENST00000536483 PTP4A2Q12974 167 aa12.83□□□□□ -0.36
PRKDC-207ENST00000536483 SUZ12Q15022 739 aaKnown RBP12.83□□□□□ -0.36
PRKDC-207ENST00000536483 COL28A1Q2UY09 1125 aa12.83□□□□□ -0.36
PRKDC-207ENST00000536483 ARTNQ5T4W7 220 aa12.83□□□□□ -0.36
PRKDC-207ENST00000536483 TAF3Q5VWG9 929 aa12.83□□□□□ -0.36
PRKDC-207ENST00000536483 MBLAC2Q68D91 279 aa12.83□□□□□ -0.36
PRKDC-207ENST00000536483 LAYNQ6UX15 382 aa12.83□□□□□ -0.36
PRKDC-207ENST00000536483 MARCH9Q86YJ5 346 aa12.83□□□□□ -0.36
PRKDC-207ENST00000536483 MFN1Q8IWA4 741 aa12.83□□□□□ -0.36
PRKDC-207ENST00000536483 ZNF683Q8IZ20 524 aa12.83□□□□□ -0.36
PRKDC-207ENST00000536483 SLC20A1Q8WUM9 679 aa12.83□□□□□ -0.36
PRKDC-207ENST00000536483 CPA5Q8WXQ8 436 aa12.83□□□□□ -0.36
PRKDC-207ENST00000536483 BIRC7Q96CA5 298 aa12.83□□□□□ -0.36
PRKDC-207ENST00000536483 MYO19Q96H55 970 aa12.83□□□□□ -0.36
PRKDC-207ENST00000536483 SYT11Q9BT88 431 aa12.83□□□□□ -0.36
PRKDC-207ENST00000536483 EDEM3Q9BZQ6 932 aa12.83□□□□□ -0.36
PRKDC-207ENST00000536483 FAM204AQ9H8W3 233 aa12.83□□□□□ -0.36
PRKDC-207ENST00000536483 TM9SF3Q9HD45 589 aa12.83□□□□□ -0.36
PRKDC-207ENST00000536483 NLRC4Q9NPP4 1024 aa12.83□□□□□ -0.36
PRKDC-207ENST00000536483 PIGVQ9NUD9 493 aa12.83□□□□□ -0.36
PRKDC-207ENST00000536483 PAXBP1Q9Y5B6 917 aa12.83□□□□□ -0.36
PRKDC-207ENST00000536483 ITPR1Q14643 2758 aa12.82□□□□□ -0.36
PRKDC-207ENST00000536483 ADAMTS20P59510 1910 aa12.82□□□□□ -0.36
PRKDC-207ENST00000536483 DRGXA6NNA5 263 aa12.82□□□□□ -0.36
PRKDC-207ENST00000536483 F5H5T6 163 aa12.82□□□□□ -0.36
PRKDC-207ENST00000536483 M0QYT0 321 aa12.82□□□□□ -0.36
PRKDC-207ENST00000536483 TEX33O43247 280 aa12.82□□□□□ -0.36
PRKDC-207ENST00000536483 GRAP2O75791 330 aa12.82□□□□□ -0.36
PRKDC-207ENST00000536483 DNTTP04053 509 aa12.82□□□□□ -0.36
PRKDC-207ENST00000536483 CCDC172P0C7W6 258 aa12.82□□□□□ -0.36
PRKDC-207ENST00000536483 POLR2EP19388 210 aaKnown RBP12.82□□□□□ -0.36
PRKDC-207ENST00000536483 FLT3P36888 993 aa12.82□□□□□ -0.36
PRKDC-207ENST00000536483 ZBTB16Q05516 673 aa12.82□□□□□ -0.36
PRKDC-207ENST00000536483 AUHQ13825 339 aaKnown RBP12.82□□□□□ -0.36
PRKDC-207ENST00000536483 TEAD4Q15561 434 aa12.82□□□□□ -0.36
PRKDC-207ENST00000536483 FSCBQ5H9T9 825 aa12.82□□□□□ -0.36
PRKDC-207ENST00000536483 NAA35Q5VZE5 725 aa12.82□□□□□ -0.36
PRKDC-207ENST00000536483 RAP1GAP2Q684P5 730 aa12.82□□□□□ -0.36
PRKDC-207ENST00000536483 FBXL22Q6P050 247 aa12.82□□□□□ -0.36
PRKDC-207ENST00000536483 IRF2BP2Q7Z5L9 587 aa12.82□□□□□ -0.36
PRKDC-207ENST00000536483 PHF13Q86YI8 300 aaPredicted RBP12.82□□□□□ -0.36
PRKDC-207ENST00000536483 LGI2Q8N0V4 545 aa12.82□□□□□ -0.36
PRKDC-207ENST00000536483 BAP1Q92560 729 aa12.82□□□□□ -0.36
PRKDC-207ENST00000536483 CENPIQ92674 756 aaPredicted RBP12.82□□□□□ -0.36
PRKDC-207ENST00000536483 MRGPRX3Q96LB0 322 aa12.82□□□□□ -0.36
PRKDC-207ENST00000536483 PCDHB18PQ96TA0 734 aa12.82□□□□□ -0.36
PRKDC-207ENST00000536483 MTG2Q9H4K7 406 aa12.82□□□□□ -0.36
PRKDC-207ENST00000536483 OSGEPQ9NPF4 335 aa12.82□□□□□ -0.36
PRKDC-207ENST00000536483 SUN2Q9UH99 717 aa12.82□□□□□ -0.36
PRKDC-207ENST00000536483 TBC1D30Q9Y2I9 924 aa12.82□□□□□ -0.36
PRKDC-207ENST00000536483 RAXQ9Y2V3 346 aa12.82□□□□□ -0.36
PRKDC-207ENST00000536483 GOLGA4Q13439 2230 aaKnown RBP12.82□□□□□ -0.36
PRKDC-207ENST00000536483 ITIH6Q6UXX5 1313 aa12.82□□□□□ -0.36
PRKDC-207ENST00000536483 IGLV3-10A0A075B6K4 115 aa12.81□□□□□ -0.36
PRKDC-207ENST00000536483 A0A1B0GVM2 712 aa12.81□□□□□ -0.36
PRKDC-207ENST00000536483 TCRBV5S1A1TA0A578 114 aa12.81□□□□□ -0.36
PRKDC-207ENST00000536483 TCAF2A6NFQ2 919 aa12.81□□□□□ -0.36
PRKDC-207ENST00000536483 H0Y8X5 98 aa12.81□□□□□ -0.36
PRKDC-207ENST00000536483 I6L893 689 aaPredicted RBP12.81□□□□□ -0.36
PRKDC-207ENST00000536483 PAGE1O75459 146 aa12.81□□□□□ -0.36
PRKDC-207ENST00000536483 DKK1O94907 266 aa12.81□□□□□ -0.36
PRKDC-207ENST00000536483 MOCS2O96007 188 aaPredicted RBP12.81□□□□□ -0.36
PRKDC-207ENST00000536483 SRPRAP08240 638 aaKnown RBP12.81□□□□□ -0.36
PRKDC-207ENST00000536483 FERP16591 822 aa12.81□□□□□ -0.36
PRKDC-207ENST00000536483 TFE3P19532 575 aaPredicted RBP12.81□□□□□ -0.36
PRKDC-207ENST00000536483 CD27P26842 260 aa12.81□□□□□ -0.36
PRKDC-207ENST00000536483 GRIA4P48058 902 aa12.81□□□□□ -0.36
PRKDC-207ENST00000536483 CDH18Q13634 790 aa12.81□□□□□ -0.36
PRKDC-207ENST00000536483 NR1I3Q14994 352 aa12.81□□□□□ -0.36
PRKDC-207ENST00000536483 CLEC16AQ2KHT3 1053 aa12.81□□□□□ -0.36
PRKDC-207ENST00000536483 TTC31Q49AM3 519 aaPredicted RBP12.81□□□□□ -0.36
PRKDC-207ENST00000536483 FIGNQ5HY92 759 aa12.81□□□□□ -0.36
PRKDC-207ENST00000536483 KCNT1Q5JUK3 1230 aa12.81□□□□□ -0.36
PRKDC-207ENST00000536483 RABGAP1LQ5R372 815 aa12.81□□□□□ -0.36
PRKDC-207ENST00000536483 FAM102AQ5T9C2 384 aaPredicted RBP12.81□□□□□ -0.36
PRKDC-207ENST00000536483 TRNP1Q6NT89 227 aa12.81□□□□□ -0.36
PRKDC-207ENST00000536483 PDZD3Q86UT5 571 aa12.81□□□□□ -0.36
PRKDC-207ENST00000536483 CHSY1Q86X52 802 aa12.81□□□□□ -0.36
PRKDC-207ENST00000536483 CCDC117Q8IWD4 279 aaPredicted RBP12.81□□□□□ -0.36
PRKDC-207ENST00000536483 CFAP52Q8N1V2 620 aa12.81□□□□□ -0.36
PRKDC-207ENST00000536483 HNRNPLLQ8WVV9 542 aaKnown RBP12.81□□□□□ -0.36
PRKDC-207ENST00000536483 ALG14Q96F25 216 aa12.81□□□□□ -0.36
PRKDC-207ENST00000536483 HAPLN3Q96S86 360 aa12.81□□□□□ -0.36
PRKDC-207ENST00000536483 PPP1R9BQ96SB3 815 aa12.81□□□□□ -0.36
PRKDC-207ENST00000536483 ORAI3Q9BRQ5 295 aa12.81□□□□□ -0.36
PRKDC-207ENST00000536483 RETREG1Q9H6L5 497 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms