RNA–Protein interactions for RNA: ENST00000535915.5

LDLR-203, Transcript of low density lipoprotein receptor, humanhuman

TSL 2 BASIC

Gene LDLR, Length 2,768 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-203ENST00000535915 THP07101 528 aa13.44□□□□□ -0.26
LDLR-203ENST00000535915 ACADSP16219 412 aa13.44□□□□□ -0.26
LDLR-203ENST00000535915 AOC1P19801 751 aa13.44□□□□□ -0.26
LDLR-203ENST00000535915 NFKB1P19838 968 aa13.44□□□□□ -0.26
LDLR-203ENST00000535915 CYP2B6P20813 491 aa13.44□□□□□ -0.26
LDLR-203ENST00000535915 CD68P34810 354 aaPredicted RBP13.44□□□□□ -0.26
LDLR-203ENST00000535915 LIMK2P53671 638 aa13.44□□□□□ -0.26
LDLR-203ENST00000535915 ABCE1P61221 599 aaKnown RBP13.44□□□□□ -0.26
LDLR-203ENST00000535915 BLMHQ13867 455 aa13.44□□□□□ -0.26
LDLR-203ENST00000535915 ANKRD20A4Q4UJ75 823 aa13.44□□□□□ -0.26
LDLR-203ENST00000535915 ITPRIPL1Q6GPH6 555 aa13.44□□□□□ -0.26
LDLR-203ENST00000535915 ATG14Q6ZNE5 492 aa13.44□□□□□ -0.26
LDLR-203ENST00000535915 LRRC74BQ6ZQY2 392 aa13.44□□□□□ -0.26
LDLR-203ENST00000535915 LMNTD2Q8IXW0 634 aa13.44□□□□□ -0.26
LDLR-203ENST00000535915 PLD6Q8N2A8 252 aaKnown RBP13.44□□□□□ -0.26
LDLR-203ENST00000535915 GSTCDQ8NEC7 633 aa13.44□□□□□ -0.26
LDLR-203ENST00000535915 LPPQ93052 612 aa13.44□□□□□ -0.26
LDLR-203ENST00000535915 HDAC11Q96DB2 347 aa13.44□□□□□ -0.26
LDLR-203ENST00000535915 ZNF333Q96JL9 665 aa13.44□□□□□ -0.26
LDLR-203ENST00000535915 EPAS1Q99814 870 aa13.44□□□□□ -0.26
LDLR-203ENST00000535915 OR12D3Q9UGF7 316 aa13.44□□□□□ -0.26
LDLR-203ENST00000535915 CEP350Q5VT06 3117 aa13.44□□□□□ -0.26
LDLR-203ENST00000535915 ZCWPW2A0A1B0GU75 182 aa13.43□□□□□ -0.26
LDLR-203ENST00000535915 ERI2A8K979 691 aaKnown RBP13.43□□□□□ -0.26
LDLR-203ENST00000535915 M0QZ92 97 aa13.43□□□□□ -0.26
LDLR-203ENST00000535915 MTSS1O43312 755 aa13.43□□□□□ -0.26
LDLR-203ENST00000535915 C6orf222P0C671 652 aaPredicted RBP13.43□□□□□ -0.26
LDLR-203ENST00000535915 SERPINB6P35237 376 aa13.43□□□□□ -0.26
LDLR-203ENST00000535915 ABCG1P45844 678 aa13.43□□□□□ -0.26
LDLR-203ENST00000535915 ERFP50548 548 aa13.43□□□□□ -0.26
LDLR-203ENST00000535915 RAB41Q5JT25 222 aa13.43□□□□□ -0.26
LDLR-203ENST00000535915 KCTD11Q693B1 232 aa13.43□□□□□ -0.26
LDLR-203ENST00000535915 NET1Q7Z628 596 aaPredicted RBP13.43□□□□□ -0.26
LDLR-203ENST00000535915 RSPH3Q86UC2 560 aa13.43□□□□□ -0.26
LDLR-203ENST00000535915 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.43□□□□□ -0.26
LDLR-203ENST00000535915 C3orf58Q8NDZ4 430 aa13.43□□□□□ -0.26
LDLR-203ENST00000535915 PGAP3Q96FM1 320 aaPredicted RBP13.43□□□□□ -0.26
LDLR-203ENST00000535915 MLPHQ9BV36 600 aaPredicted RBP13.43□□□□□ -0.26
LDLR-203ENST00000535915 RHOBTB2Q9BYZ6 727 aa13.43□□□□□ -0.26
LDLR-203ENST00000535915 BRD8Q9H0E9 1235 aa13.43□□□□□ -0.26
LDLR-203ENST00000535915 C1orf21Q9H246 121 aa13.43□□□□□ -0.26
LDLR-203ENST00000535915 CAB39LQ9H9S4 337 aa13.43□□□□□ -0.26
LDLR-203ENST00000535915 FAM105AQ9NUU6 356 aa13.43□□□□□ -0.26
LDLR-203ENST00000535915 UBP1Q9NZI7 540 aa13.43□□□□□ -0.26
LDLR-203ENST00000535915 TRHDEQ9UKU6 1024 aa13.43□□□□□ -0.26
LDLR-203ENST00000535915 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.43□□□□□ -0.26
LDLR-203ENST00000535915 ARHGAP42A6NI28 874 aa13.43□□□□□ -0.26
LDLR-203ENST00000535915 KLHL2O95198 593 aa13.43□□□□□ -0.26
LDLR-203ENST00000535915 F9P00740 461 aa13.43□□□□□ -0.26
LDLR-203ENST00000535915 PDHA1P08559 390 aa13.43□□□□□ -0.26
LDLR-203ENST00000535915 TPH1P17752 444 aa13.43□□□□□ -0.26
LDLR-203ENST00000535915 ARRB2P32121 409 aa13.43□□□□□ -0.26
LDLR-203ENST00000535915 IDH3AP50213 366 aa13.43□□□□□ -0.26
LDLR-203ENST00000535915 FSCN1Q16658 493 aaKnown RBP13.43□□□□□ -0.26
LDLR-203ENST00000535915 CMPK2Q5EBM0 449 aa13.43□□□□□ -0.26
LDLR-203ENST00000535915 MAVSQ7Z434 540 aa13.43□□□□□ -0.26
LDLR-203ENST00000535915 KCNMB4Q86W47 210 aa13.43□□□□□ -0.26
LDLR-203ENST00000535915 SCG3Q8WXD2 468 aaKnown RBP13.43□□□□□ -0.26
LDLR-203ENST00000535915 SMARCD1Q96GM5 515 aa13.43□□□□□ -0.26
LDLR-203ENST00000535915 OSBPL1AQ9BXW6 950 aa13.43□□□□□ -0.26
LDLR-203ENST00000535915 FAM96AQ9H5X1 160 aa13.43□□□□□ -0.26
LDLR-203ENST00000535915 CHRAC1Q9NRG0 131 aa13.43□□□□□ -0.26
LDLR-203ENST00000535915 C20orf96Q9NUD7 363 aaPredicted RBP13.43□□□□□ -0.26
LDLR-203ENST00000535915 MIOSQ9NXC5 875 aa13.43□□□□□ -0.26
LDLR-203ENST00000535915 SOX13Q9UN79 622 aa13.43□□□□□ -0.26
LDLR-203ENST00000535915 CDY2AQ9Y6F7 541 aa13.43□□□□□ -0.26
LDLR-203ENST00000535915 TDRD15B5MCY1 1934 aaKnown RBP13.43□□□□□ -0.26
LDLR-203ENST00000535915 A0A096LPK6 155 aa13.43□□□□□ -0.26
LDLR-203ENST00000535915 CASTOR2A6NHX0 329 aa13.43□□□□□ -0.26
LDLR-203ENST00000535915 F8W8V4 182 aa13.43□□□□□ -0.26
LDLR-203ENST00000535915 LIN7AO14910 233 aaPredicted RBP13.43□□□□□ -0.26
LDLR-203ENST00000535915 SIN3BO75182 1162 aa13.43□□□□□ -0.26
LDLR-203ENST00000535915 CDK7P50613 346 aa13.43□□□□□ -0.26
LDLR-203ENST00000535915 GALNT2Q10471 571 aa13.43□□□□□ -0.26
LDLR-203ENST00000535915 IRF5Q13568 498 aa13.43□□□□□ -0.26
LDLR-203ENST00000535915 TRMT5Q32P41 509 aaKnown RBP13.43□□□□□ -0.26
LDLR-203ENST00000535915 INTS6LQ5JSJ4 861 aaKnown RBP13.43□□□□□ -0.26
LDLR-203ENST00000535915 RABGAP1LQ5R372 815 aa13.43□□□□□ -0.26
LDLR-203ENST00000535915 VWA5B1Q5TIE3 1220 aa13.43□□□□□ -0.26
LDLR-203ENST00000535915 ANO7Q6IWH7 933 aa13.43□□□□□ -0.26
LDLR-203ENST00000535915 RIPOR1Q6ZS17 1223 aa13.43□□□□□ -0.26
LDLR-203ENST00000535915 POU5F2Q8N7G0 328 aa13.43□□□□□ -0.26
LDLR-203ENST00000535915 RNF34Q969K3 372 aa13.43□□□□□ -0.26
LDLR-203ENST00000535915 CELF6Q96J87 481 aaKnown RBP13.43□□□□□ -0.26
LDLR-203ENST00000535915 PANX3Q96QZ0 392 aa13.43□□□□□ -0.26
LDLR-203ENST00000535915 DNAJC28Q9NX36 388 aa13.43□□□□□ -0.26
LDLR-203ENST00000535915 RRN3Q9NYV6 651 aa13.43□□□□□ -0.26
LDLR-203ENST00000535915 SLC7A8Q9UHI5 535 aa13.43□□□□□ -0.26
LDLR-203ENST00000535915 CDH9Q9ULB4 789 aa13.43□□□□□ -0.26
LDLR-203ENST00000535915 ST3GAL5Q9UNP4 418 aa13.43□□□□□ -0.26
LDLR-203ENST00000535915 PTCH2Q9Y6C5 1203 aa13.43□□□□□ -0.26
LDLR-203ENST00000535915 SMNDC1O75940 238 aaKnown RBP eCLIP13.42□□□□□ -0.26
LDLR-203ENST00000535915 LRIG2O94898 1065 aa13.42□□□□□ -0.26
LDLR-203ENST00000535915 MAGEA12P43365 314 aa13.42□□□□□ -0.26
LDLR-203ENST00000535915 NPY2RP49146 381 aa13.42□□□□□ -0.26
LDLR-203ENST00000535915 MRPS6P82932 125 aaKnown RBP13.42□□□□□ -0.26
LDLR-203ENST00000535915 PURAQ00577 322 aaKnown RBP13.42□□□□□ -0.26
LDLR-203ENST00000535915 IRF9Q00978 393 aa13.42□□□□□ -0.26
LDLR-203ENST00000535915 MPP3Q13368 585 aa13.42□□□□□ -0.26
LDLR-203ENST00000535915 DLG2Q15700 870 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms