RNA–Protein interactions for RNA: ENST00000535313.1

CLSTN3-204, Transcript of calsyntenin 3, humanhuman

TSL 2

Gene CLSTN3, Length 787 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-204ENST00000535313 KLK13Q9UKR3 277 aa16.65■□□□□ 0.26
CLSTN3-204ENST00000535313 APOBEC2Q9Y235 224 aaKnown RBP16.65■□□□□ 0.26
CLSTN3-204ENST00000535313 MSRB2Q9Y3D2 182 aa16.65■□□□□ 0.26
CLSTN3-204ENST00000535313 F8VZ95 297 aa16.64■□□□□ 0.25
CLSTN3-204ENST00000535313 CBFA2T3O75081 653 aa16.64■□□□□ 0.25
CLSTN3-204ENST00000535313 ADCY5O95622 1261 aa16.64■□□□□ 0.25
CLSTN3-204ENST00000535313 VAV1P15498 845 aa16.64■□□□□ 0.25
CLSTN3-204ENST00000535313 CCT8P50990 548 aa16.64■□□□□ 0.25
CLSTN3-204ENST00000535313 IRAK1P51617 712 aa16.64■□□□□ 0.25
CLSTN3-204ENST00000535313 SLC25A52Q3SY17 297 aa16.64■□□□□ 0.25
CLSTN3-204ENST00000535313 C5orf22Q49AR2 442 aa16.64■□□□□ 0.25
CLSTN3-204ENST00000535313 ACBD5Q5T8D3 534 aaPredicted RBP16.64■□□□□ 0.25
CLSTN3-204ENST00000535313 OTUD1Q5VV17 481 aaPredicted RBP16.64■□□□□ 0.25
CLSTN3-204ENST00000535313 FAM46CQ5VWP2 391 aa16.64■□□□□ 0.25
CLSTN3-204ENST00000535313 LAYNQ6UX15 382 aa16.64■□□□□ 0.25
CLSTN3-204ENST00000535313 LRRC31Q6UY01 552 aa16.64■□□□□ 0.25
CLSTN3-204ENST00000535313 CLEC17AQ6ZS10 378 aa16.64■□□□□ 0.25
CLSTN3-204ENST00000535313 RAB44Q7Z6P3 723 aaPredicted RBP16.64■□□□□ 0.25
CLSTN3-204ENST00000535313 GLRX5Q86SX6 157 aa16.64■□□□□ 0.25
CLSTN3-204ENST00000535313 NOP9Q86U38 636 aaKnown RBP16.64■□□□□ 0.25
CLSTN3-204ENST00000535313 XYLT1Q86Y38 959 aa16.64■□□□□ 0.25
CLSTN3-204ENST00000535313 AADATQ8N5Z0 425 aa16.64■□□□□ 0.25
CLSTN3-204ENST00000535313 KDF1Q8NAX2 398 aaPredicted RBP16.64■□□□□ 0.25
CLSTN3-204ENST00000535313 RHBDD1Q8TEB9 315 aa16.64■□□□□ 0.25
CLSTN3-204ENST00000535313 FRS2Q8WU20 508 aa16.64■□□□□ 0.25
CLSTN3-204ENST00000535313 OR8D1Q8WZ84 308 aa16.64■□□□□ 0.25
CLSTN3-204ENST00000535313 ALG14Q96F25 216 aa16.64■□□□□ 0.25
CLSTN3-204ENST00000535313 PGAP3Q96FM1 320 aaPredicted RBP16.64■□□□□ 0.25
CLSTN3-204ENST00000535313 CDC6Q99741 560 aa16.64■□□□□ 0.25
CLSTN3-204ENST00000535313 ORAI3Q9BRQ5 295 aa16.64■□□□□ 0.25
CLSTN3-204ENST00000535313 TMEM121BQ9BXQ6 578 aaPredicted RBP16.64■□□□□ 0.25
CLSTN3-204ENST00000535313 LMBRD1Q9NUN5 540 aa16.64■□□□□ 0.25
CLSTN3-204ENST00000535313 TPX2Q9ULW0 747 aaKnown RBP16.64■□□□□ 0.25
CLSTN3-204ENST00000535313 TBC1D30Q9Y2I9 924 aa16.64■□□□□ 0.25
CLSTN3-204ENST00000535313 AKAP13Q12802 2813 aa16.64■□□□□ 0.25
CLSTN3-204ENST00000535313 FAM170AA1A519 330 aa16.63■□□□□ 0.25
CLSTN3-204ENST00000535313 GOLGA8SH3BPF8 625 aa16.63■□□□□ 0.25
CLSTN3-204ENST00000535313 VILLO15195 856 aa16.63■□□□□ 0.25
CLSTN3-204ENST00000535313 ATP9BO43861 1147 aa16.63■□□□□ 0.25
CLSTN3-204ENST00000535313 DFNA5O60443 496 aa16.63■□□□□ 0.25
CLSTN3-204ENST00000535313 RHOCP08134 193 aa16.63■□□□□ 0.25
CLSTN3-204ENST00000535313 TFE3P19532 575 aaPredicted RBP16.63■□□□□ 0.25
CLSTN3-204ENST00000535313 CTSKP43235 329 aa16.63■□□□□ 0.25
CLSTN3-204ENST00000535313 CCR5P51681 352 aa16.63■□□□□ 0.25
CLSTN3-204ENST00000535313 ADPRHP54922 357 aa16.63■□□□□ 0.25
CLSTN3-204ENST00000535313 KRT83P78385 493 aa16.63■□□□□ 0.25
CLSTN3-204ENST00000535313 DLG2Q15700 870 aa16.63■□□□□ 0.25
CLSTN3-204ENST00000535313 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP16.63■□□□□ 0.25
CLSTN3-204ENST00000535313 DBX2Q6ZNG2 339 aa16.63■□□□□ 0.25
CLSTN3-204ENST00000535313 ADAMTS14Q8WXS8 1223 aa16.63■□□□□ 0.25
CLSTN3-204ENST00000535313 NT5C3BQ969T7 300 aa16.63■□□□□ 0.25
CLSTN3-204ENST00000535313 SLC6A18Q96N87 628 aa16.63■□□□□ 0.25
CLSTN3-204ENST00000535313 TBCBQ99426 244 aa16.63■□□□□ 0.25
CLSTN3-204ENST00000535313 VPS16Q9H269 839 aa16.63■□□□□ 0.25
CLSTN3-204ENST00000535313 AASDHPPTQ9NRN7 309 aa16.63■□□□□ 0.25
CLSTN3-204ENST00000535313 ZMIZ1Q9ULJ6 1067 aa16.63■□□□□ 0.25
CLSTN3-204ENST00000535313 OR51B4Q9Y5P0 310 aa16.63■□□□□ 0.25
CLSTN3-204ENST00000535313 ASPMQ8IZT6 3477 aa16.62■□□□□ 0.25
CLSTN3-204ENST00000535313 TBC1D3DA0A087WVF3 549 aa16.62■□□□□ 0.25
CLSTN3-204ENST00000535313 TBC1D3IA0A087WXS9 549 aa16.62■□□□□ 0.25
CLSTN3-204ENST00000535313 TBC1D3EA0A087X179 549 aa16.62■□□□□ 0.25
CLSTN3-204ENST00000535313 TBC1D3KA0A087X1G2 549 aa16.62■□□□□ 0.25
CLSTN3-204ENST00000535313 TBC1D3FA6NER0 549 aaPredicted RBP16.62■□□□□ 0.25
CLSTN3-204ENST00000535313 TBC1D3LB9A6J9 549 aa16.62■□□□□ 0.25
CLSTN3-204ENST00000535313 C1QTNF3-AMACRE9PGA6 284 aa16.62■□□□□ 0.25
CLSTN3-204ENST00000535313 KCNK3O14649 394 aa16.62■□□□□ 0.25
CLSTN3-204ENST00000535313 CNTN5O94779 1100 aa16.62■□□□□ 0.25
CLSTN3-204ENST00000535313 MMEP08473 750 aa16.62■□□□□ 0.25
CLSTN3-204ENST00000535313 TBC1D3HP0C7X1 549 aa16.62■□□□□ 0.25
CLSTN3-204ENST00000535313 ZNF18P17022 549 aa16.62■□□□□ 0.25
CLSTN3-204ENST00000535313 FKBP15Q5T1M5 1219 aa16.62■□□□□ 0.25
CLSTN3-204ENST00000535313 NAA35Q5VZE5 725 aa16.62■□□□□ 0.25
CLSTN3-204ENST00000535313 TBC1D3GQ6DHY5 549 aa16.62■□□□□ 0.25
CLSTN3-204ENST00000535313 TBC1D3CQ6IPX1 549 aa16.62■□□□□ 0.25
CLSTN3-204ENST00000535313 SETD3Q86TU7 594 aaPredicted RBP16.62■□□□□ 0.25
CLSTN3-204ENST00000535313 ZNF677Q86XU0 584 aa16.62■□□□□ 0.25
CLSTN3-204ENST00000535313 TBC1D3Q8IZP1 549 aaPredicted RBP16.62■□□□□ 0.25
CLSTN3-204ENST00000535313 PNPLA1Q8N8W4 532 aa16.62■□□□□ 0.25
CLSTN3-204ENST00000535313 OR52K2Q8NGK3 314 aa16.62■□□□□ 0.25
CLSTN3-204ENST00000535313 EPS8L1Q8TE68 723 aa16.62■□□□□ 0.25
CLSTN3-204ENST00000535313 CPA5Q8WXQ8 436 aa16.62■□□□□ 0.25
CLSTN3-204ENST00000535313 C1orf74Q96LT6 269 aa16.62■□□□□ 0.25
CLSTN3-204ENST00000535313 C2orf49Q9BVC5 232 aaPredicted RBP16.62■□□□□ 0.25
CLSTN3-204ENST00000535313 ANLNQ9NQW6 1124 aa16.62■□□□□ 0.25
CLSTN3-204ENST00000535313 FARP1Q9Y4F1 1045 aaPredicted RBP16.62■□□□□ 0.25
CLSTN3-204ENST00000535313 FAM221BA6H8Z2 402 aa16.61■□□□□ 0.25
CLSTN3-204ENST00000535313 H0Y8X5 98 aa16.61■□□□□ 0.25
CLSTN3-204ENST00000535313 ALOX15BO15296 676 aa16.61■□□□□ 0.25
CLSTN3-204ENST00000535313 SLC7A4O43246 635 aa16.61■□□□□ 0.25
CLSTN3-204ENST00000535313 BNIP3LO60238 219 aa16.61■□□□□ 0.25
CLSTN3-204ENST00000535313 PCDHGA12O60330 932 aa16.61■□□□□ 0.25
CLSTN3-204ENST00000535313 GFPT2O94808 682 aa16.61■□□□□ 0.25
CLSTN3-204ENST00000535313 CD38P28907 300 aa16.61■□□□□ 0.25
CLSTN3-204ENST00000535313 DRD3P35462 400 aa16.61■□□□□ 0.25
CLSTN3-204ENST00000535313 FLT3P36888 993 aa16.61■□□□□ 0.25
CLSTN3-204ENST00000535313 GRK6P43250 576 aa16.61■□□□□ 0.25
CLSTN3-204ENST00000535313 NOMO3P69849 1222 aa16.61■□□□□ 0.25
CLSTN3-204ENST00000535313 KRT31Q15323 416 aa16.61■□□□□ 0.25
CLSTN3-204ENST00000535313 INAVAQ3KP66 663 aa16.61■□□□□ 0.25
CLSTN3-204ENST00000535313 ALFQ53S48 1182 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms