RNA–Protein interactions for RNA: ENST00000534699.5

CSDE1-217, Transcript of cold shock domain containing E1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CSDE1, Length 2,667 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-217ENST00000534699 MOCS2O96007 188 aaPredicted RBP10.68□□□□□ -0.7
CSDE1-217ENST00000534699 RHOCP08134 193 aa10.68□□□□□ -0.7
CSDE1-217ENST00000534699 UNGP13051 313 aaPredicted RBP10.68□□□□□ -0.7
CSDE1-217ENST00000534699 SLC8A1P32418 973 aa10.68□□□□□ -0.7
CSDE1-217ENST00000534699 CCT8P50990 548 aa10.68□□□□□ -0.7
CSDE1-217ENST00000534699 PSAPL1Q6NUJ1 521 aa10.68□□□□□ -0.7
CSDE1-217ENST00000534699 NOP9Q86U38 636 aaKnown RBP10.68□□□□□ -0.7
CSDE1-217ENST00000534699 BAHD1Q8TBE0 780 aaPredicted RBP10.68□□□□□ -0.7
CSDE1-217ENST00000534699 ADAMTS14Q8WXS8 1223 aa10.68□□□□□ -0.7
CSDE1-217ENST00000534699 PTPRN2Q92932 1015 aa10.68□□□□□ -0.7
CSDE1-217ENST00000534699 PPP1R16AQ96I34 528 aa10.68□□□□□ -0.7
CSDE1-217ENST00000534699 OMDQ99983 421 aa10.68□□□□□ -0.7
CSDE1-217ENST00000534699 ZYG11BQ9C0D3 744 aa10.68□□□□□ -0.7
CSDE1-217ENST00000534699 TKTL2Q9H0I9 626 aa10.68□□□□□ -0.7
CSDE1-217ENST00000534699 FBXL12Q9NXK8 326 aa10.68□□□□□ -0.7
CSDE1-217ENST00000534699 AJAP1Q9UKB5 411 aaPredicted RBP10.68□□□□□ -0.7
CSDE1-217ENST00000534699 WASF3Q9UPY6 502 aa10.68□□□□□ -0.7
CSDE1-217ENST00000534699 PCDHB9Q9Y5E1 797 aa10.68□□□□□ -0.7
CSDE1-217ENST00000534699 TP53BP1Q12888 1972 aaPredicted RBP10.67□□□□□ -0.7
CSDE1-217ENST00000534699 WASH4PA8MWX3 477 aa10.67□□□□□ -0.7
CSDE1-217ENST00000534699 PATE3B3GLJ2 98 aa10.67□□□□□ -0.7
CSDE1-217ENST00000534699 ATP1A3P13637 1013 aa10.67□□□□□ -0.7
CSDE1-217ENST00000534699 RHOQP17081 205 aa10.67□□□□□ -0.7
CSDE1-217ENST00000534699 SDC4P31431 198 aa10.67□□□□□ -0.7
CSDE1-217ENST00000534699 RXRGP48443 463 aa10.67□□□□□ -0.7
CSDE1-217ENST00000534699 GALCP54803 685 aa10.67□□□□□ -0.7
CSDE1-217ENST00000534699 CCDC6Q16204 474 aa10.67□□□□□ -0.7
CSDE1-217ENST00000534699 FIGNQ5HY92 759 aa10.67□□□□□ -0.7
CSDE1-217ENST00000534699 OTUD1Q5VV17 481 aaPredicted RBP10.67□□□□□ -0.7
CSDE1-217ENST00000534699 NAPEPLDQ6IQ20 393 aa10.67□□□□□ -0.7
CSDE1-217ENST00000534699 ARMCX6Q7L4S7 300 aa10.67□□□□□ -0.7
CSDE1-217ENST00000534699 PSTKQ8IV42 348 aaKnown RBP10.67□□□□□ -0.7
CSDE1-217ENST00000534699 NAXDQ8IW45 347 aa10.67□□□□□ -0.7
CSDE1-217ENST00000534699 C3orf20Q8ND61 904 aa10.67□□□□□ -0.7
CSDE1-217ENST00000534699 RAB7BQ96AH8 199 aa10.67□□□□□ -0.7
CSDE1-217ENST00000534699 HDAC8Q9BY41 377 aa10.67□□□□□ -0.7
CSDE1-217ENST00000534699 MAGEH1Q9H213 219 aa10.67□□□□□ -0.7
CSDE1-217ENST00000534699 TAB2Q9NYJ8 693 aa10.67□□□□□ -0.7
CSDE1-217ENST00000534699 MSRB2Q9Y3D2 182 aa10.67□□□□□ -0.7
CSDE1-217ENST00000534699 PCDHGA1Q9Y5H4 931 aa10.67□□□□□ -0.7
CSDE1-217ENST00000534699 SIGLEC16A6NMB1 481 aa10.67□□□□□ -0.7
CSDE1-217ENST00000534699 PLRG1O43660 514 aaKnown RBP10.67□□□□□ -0.7
CSDE1-217ENST00000534699 AP1G1O43747 822 aa10.67□□□□□ -0.7
CSDE1-217ENST00000534699 PDGFRAP16234 1089 aa10.67□□□□□ -0.7
CSDE1-217ENST00000534699 CTSKP43235 329 aa10.67□□□□□ -0.7
CSDE1-217ENST00000534699 YBEYP58557 167 aaPredicted RBP10.67□□□□□ -0.7
CSDE1-217ENST00000534699 FMO1Q01740 532 aa10.67□□□□□ -0.7
CSDE1-217ENST00000534699 CLEC16AQ2KHT3 1053 aa10.67□□□□□ -0.7
CSDE1-217ENST00000534699 FSCBQ5H9T9 825 aa10.67□□□□□ -0.7
CSDE1-217ENST00000534699 RAB44Q7Z6P3 723 aaPredicted RBP10.67□□□□□ -0.7
CSDE1-217ENST00000534699 FRMD1Q8N878 549 aa10.67□□□□□ -0.7
CSDE1-217ENST00000534699 MFSD2AQ8NA29 543 aa10.67□□□□□ -0.7
CSDE1-217ENST00000534699 SORCS1Q8WY21 1168 aa10.67□□□□□ -0.7
CSDE1-217ENST00000534699 TRIM11Q96F44 468 aa10.67□□□□□ -0.7
CSDE1-217ENST00000534699 SMOC1Q9H4F8 434 aa10.67□□□□□ -0.7
CSDE1-217ENST00000534699 TM9SF3Q9HD45 589 aa10.67□□□□□ -0.7
CSDE1-217ENST00000534699 PPM1HQ9ULR3 514 aa10.67□□□□□ -0.7
CSDE1-217ENST00000534699 PES1O00541 588 aaKnown RBP10.66□□□□□ -0.7
CSDE1-217ENST00000534699 HLA-EP13747 358 aa10.66□□□□□ -0.7
CSDE1-217ENST00000534699 NSFP46459 744 aaKnown RBP10.66□□□□□ -0.7
CSDE1-217ENST00000534699 ILKQ13418 452 aa10.66□□□□□ -0.7
CSDE1-217ENST00000534699 GRM3Q14832 879 aa10.66□□□□□ -0.7
CSDE1-217ENST00000534699 SETMARQ53H47 684 aaPredicted RBP10.66□□□□□ -0.7
CSDE1-217ENST00000534699 MANEALQ5VSG8 457 aa10.66□□□□□ -0.7
CSDE1-217ENST00000534699 PASD1Q8IV76 773 aa10.66□□□□□ -0.7
CSDE1-217ENST00000534699 GPT2Q8TD30 523 aa10.66□□□□□ -0.7
CSDE1-217ENST00000534699 TBCBQ99426 244 aa10.66□□□□□ -0.7
CSDE1-217ENST00000534699 ACE2Q9BYF1 805 aaPredicted RBP10.66□□□□□ -0.7
CSDE1-217ENST00000534699 PIGVQ9NUD9 493 aa10.66□□□□□ -0.7
CSDE1-217ENST00000534699 TMEM248Q9NWD8 314 aa10.66□□□□□ -0.7
CSDE1-217ENST00000534699 LCMT1Q9UIC8 334 aa10.66□□□□□ -0.7
CSDE1-217ENST00000534699 ADAMTS9Q9P2N4 1935 aa10.66□□□□□ -0.7
CSDE1-217ENST00000534699 GSRP00390 522 aa10.66□□□□□ -0.7
CSDE1-217ENST00000534699 GZMAP12544 262 aa10.66□□□□□ -0.7
CSDE1-217ENST00000534699 CDK11BP21127 795 aaKnown RBP10.66□□□□□ -0.7
CSDE1-217ENST00000534699 L1CAMP32004 1257 aa10.66□□□□□ -0.7
CSDE1-217ENST00000534699 GRK6P43250 576 aa10.66□□□□□ -0.7
CSDE1-217ENST00000534699 C21orf59P57076 290 aa10.66□□□□□ -0.7
CSDE1-217ENST00000534699 POLR2FP61218 127 aaKnown RBP10.66□□□□□ -0.7
CSDE1-217ENST00000534699 TPM4P67936 248 aa10.66□□□□□ -0.7
CSDE1-217ENST00000534699 NME3Q13232 169 aa10.66□□□□□ -0.7
CSDE1-217ENST00000534699 ACAP1Q15027 740 aa10.66□□□□□ -0.7
CSDE1-217ENST00000534699 APCDD1Q8J025 514 aa10.66□□□□□ -0.7
CSDE1-217ENST00000534699 ZCCHC9Q8N567 271 aaKnown RBP10.66□□□□□ -0.7
CSDE1-217ENST00000534699 ADAM32Q8TC27 787 aa10.66□□□□□ -0.7
CSDE1-217ENST00000534699 BIRC7Q96CA5 298 aa10.66□□□□□ -0.7
CSDE1-217ENST00000534699 ORAI3Q9BRQ5 295 aa10.66□□□□□ -0.7
CSDE1-217ENST00000534699 OSBPL1AQ9BXW6 950 aa10.66□□□□□ -0.7
CSDE1-217ENST00000534699 USP29Q9HBJ7 922 aa10.66□□□□□ -0.7
CSDE1-217ENST00000534699 EVA1BQ9NVM1 165 aa10.66□□□□□ -0.7
CSDE1-217ENST00000534699 FANCLQ9NW38 375 aa10.66□□□□□ -0.7
CSDE1-217ENST00000534699 DKK4Q9UBT3 224 aa10.66□□□□□ -0.7
CSDE1-217ENST00000534699 VPS28Q9UK41 221 aa10.66□□□□□ -0.7
CSDE1-217ENST00000534699 C2CD4BA6NLJ0 364 aa10.65□□□□□ -0.7
CSDE1-217ENST00000534699 CBFA2T3O75081 653 aa10.65□□□□□ -0.7
CSDE1-217ENST00000534699 CALCAP01258 141 aa10.65□□□□□ -0.7
CSDE1-217ENST00000534699 MMEP08473 750 aa10.65□□□□□ -0.7
CSDE1-217ENST00000534699 CHRNB2P17787 502 aa10.65□□□□□ -0.7
CSDE1-217ENST00000534699 ADRA1BP35368 520 aa10.65□□□□□ -0.7
CSDE1-217ENST00000534699 RECQLP46063 649 aaPredicted RBP10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms