RNA–Protein interactions for RNA: ENST00000534553.5

BEST1-208, Transcript of bestrophin 1, humanhuman

TSL 2 BASIC

Gene BEST1, Length 1,829 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-208ENST00000534553 ARMC5Q96C12 935 aa13.69□□□□□ -0.22
BEST1-208ENST00000534553 CELF6Q96J87 481 aaKnown RBP13.69□□□□□ -0.22
BEST1-208ENST00000534553 SEC16BQ96JE7 1060 aa13.69□□□□□ -0.22
BEST1-208ENST00000534553 TGS1Q96RS0 853 aaKnown RBP13.69□□□□□ -0.22
BEST1-208ENST00000534553 CEP41Q9BYV8 373 aa13.69□□□□□ -0.22
BEST1-208ENST00000534553 PLAC1Q9HBJ0 212 aa13.69□□□□□ -0.22
BEST1-208ENST00000534553 HCSTQ9UBK5 93 aa13.69□□□□□ -0.22
BEST1-208ENST00000534553 NUDT5Q9UKK9 219 aa13.69□□□□□ -0.22
BEST1-208ENST00000534553 NR2E3Q9Y5X4 410 aa13.69□□□□□ -0.22
BEST1-208ENST00000534553 SCN5AQ14524 2016 aa13.69□□□□□ -0.22
BEST1-208ENST00000534553 NEBLO76041 1014 aa13.69□□□□□ -0.22
BEST1-208ENST00000534553 USP1O94782 785 aa13.69□□□□□ -0.22
BEST1-208ENST00000534553 BAIAP3O94812 1187 aa13.69□□□□□ -0.22
BEST1-208ENST00000534553 ABLIM3O94929 683 aa13.69□□□□□ -0.22
BEST1-208ENST00000534553 ATF6P18850 670 aa13.69□□□□□ -0.22
BEST1-208ENST00000534553 MGAT1P26572 445 aa13.69□□□□□ -0.22
BEST1-208ENST00000534553 OR1D2P34982 312 aa13.69□□□□□ -0.22
BEST1-208ENST00000534553 PPM1AP35813 382 aa13.69□□□□□ -0.22
BEST1-208ENST00000534553 ATP5C1P36542 298 aaKnown RBP13.69□□□□□ -0.22
BEST1-208ENST00000534553 PBX3P40426 434 aa13.69□□□□□ -0.22
BEST1-208ENST00000534553 MAPKAPK2P49137 400 aa13.69□□□□□ -0.22
BEST1-208ENST00000534553 GEMP55040 296 aa13.69□□□□□ -0.22
BEST1-208ENST00000534553 SESN2P58004 480 aaPredicted RBP13.69□□□□□ -0.22
BEST1-208ENST00000534553 HNRNPDQ14103 355 aaKnown RBP13.69□□□□□ -0.22
BEST1-208ENST00000534553 CRYMQ14894 314 aa13.69□□□□□ -0.22
BEST1-208ENST00000534553 PDK4Q16654 411 aa13.69□□□□□ -0.22
BEST1-208ENST00000534553 PARP15Q460N3 678 aa13.69□□□□□ -0.22
BEST1-208ENST00000534553 SPOUT1Q5T280 376 aaKnown RBP13.69□□□□□ -0.22
BEST1-208ENST00000534553 TAS1R1Q7RTX1 841 aa13.69□□□□□ -0.22
BEST1-208ENST00000534553 SLC39A11Q8N1S5 342 aa13.69□□□□□ -0.22
BEST1-208ENST00000534553 MPP5Q8N3R9 675 aa13.69□□□□□ -0.22
BEST1-208ENST00000534553 NSMCE1Q8WV22 266 aa13.69□□□□□ -0.22
BEST1-208ENST00000534553 ARNTL2Q8WYA1 636 aa13.69□□□□□ -0.22
BEST1-208ENST00000534553 APOPT1Q96IL0 206 aa13.69□□□□□ -0.22
BEST1-208ENST00000534553 SLC39A8Q9C0K1 460 aa13.69□□□□□ -0.22
BEST1-208ENST00000534553 IQCGQ9H095 443 aaKnown RBP13.69□□□□□ -0.22
BEST1-208ENST00000534553 CRISPLD1Q9H336 500 aa13.69□□□□□ -0.22
BEST1-208ENST00000534553 C11orf49Q9H6J7 331 aa13.69□□□□□ -0.22
BEST1-208ENST00000534553 HAUS2Q9NVX0 235 aa13.69□□□□□ -0.22
BEST1-208ENST00000534553 DNMT3LQ9UJW3 386 aa13.69□□□□□ -0.22
BEST1-208ENST00000534553 FAM237BA0A1B0GVD1 139 aa13.68□□□□□ -0.22
BEST1-208ENST00000534553 A0A1W2PPM1 405 aa13.68□□□□□ -0.22
BEST1-208ENST00000534553 SLC12A8A0AV02 714 aa13.68□□□□□ -0.22
BEST1-208ENST00000534553 DRGXA6NNA5 263 aa13.68□□□□□ -0.22
BEST1-208ENST00000534553 TCP11X1B4DZS4 312 aa13.68□□□□□ -0.22
BEST1-208ENST00000534553 SPAG7O75391 227 aa13.68□□□□□ -0.22
BEST1-208ENST00000534553 TIMP1P01033 207 aa13.68□□□□□ -0.22
BEST1-208ENST00000534553 RENBPP51606 427 aa13.68□□□□□ -0.22
BEST1-208ENST00000534553 YBEYP58557 167 aaPredicted RBP13.68□□□□□ -0.22
BEST1-208ENST00000534553 VEPH1Q14D04 833 aa13.68□□□□□ -0.22
BEST1-208ENST00000534553 ARTNQ5T4W7 220 aa13.68□□□□□ -0.22
BEST1-208ENST00000534553 RASIP1Q5U651 963 aa13.68□□□□□ -0.22
BEST1-208ENST00000534553 TIFABQ6ZNK6 161 aa13.68□□□□□ -0.22
BEST1-208ENST00000534553 SRLQ86TD4 932 aa13.68□□□□□ -0.22
BEST1-208ENST00000534553 PRPF39Q86UA1 669 aaKnown RBP13.68□□□□□ -0.22
BEST1-208ENST00000534553 TMEM135Q86UB9 458 aa13.68□□□□□ -0.22
BEST1-208ENST00000534553 NETO2Q8NC67 525 aa13.68□□□□□ -0.22
BEST1-208ENST00000534553 ACMSDQ8TDX5 336 aa13.68□□□□□ -0.22
BEST1-208ENST00000534553 PTCD2Q8WV60 388 aaKnown RBP13.68□□□□□ -0.22
BEST1-208ENST00000534553 AZIN2Q96A70 460 aa13.68□□□□□ -0.22
BEST1-208ENST00000534553 TRMT2BQ96GJ1 504 aaKnown RBP13.68□□□□□ -0.22
BEST1-208ENST00000534553 MYRFLQ96LU7 910 aa13.68□□□□□ -0.22
BEST1-208ENST00000534553 VPS11Q9H270 941 aa13.68□□□□□ -0.22
BEST1-208ENST00000534553 KIF9Q9HAQ2 790 aa13.68□□□□□ -0.22
BEST1-208ENST00000534553 RC3H2Q9HBD1 1191 aaKnown RBP13.68□□□□□ -0.22
BEST1-208ENST00000534553 TXNDC16Q9P2K2 825 aa13.68□□□□□ -0.22
BEST1-208ENST00000534553 FAM169AQ9Y6X4 670 aa13.68□□□□□ -0.22
BEST1-208ENST00000534553 LPXNO60711 386 aa13.67□□□□□ -0.22
BEST1-208ENST00000534553 SOAT2O75908 522 aa13.67□□□□□ -0.22
BEST1-208ENST00000534553 URODP06132 367 aa13.67□□□□□ -0.22
BEST1-208ENST00000534553 ALADP13716 330 aa13.67□□□□□ -0.22
BEST1-208ENST00000534553 RPA3P35244 121 aaPredicted RBP13.67□□□□□ -0.22
BEST1-208ENST00000534553 ALDH1A3P47895 512 aa13.67□□□□□ -0.22
BEST1-208ENST00000534553 WDR4P57081 412 aaKnown RBP13.67□□□□□ -0.22
BEST1-208ENST00000534553 TNK2Q07912 1038 aa13.67□□□□□ -0.22
BEST1-208ENST00000534553 MGAT5Q09328 741 aa13.67□□□□□ -0.22
BEST1-208ENST00000534553 NIPAL4Q0D2K0 466 aa13.67□□□□□ -0.22
BEST1-208ENST00000534553 MIB1Q86YT6 1006 aa13.67□□□□□ -0.22
BEST1-208ENST00000534553 TMEM199Q8N511 208 aa13.67□□□□□ -0.22
BEST1-208ENST00000534553 OR52K1Q8NGK4 314 aa13.67□□□□□ -0.22
BEST1-208ENST00000534553 GDAP1Q8TB36 358 aa13.67□□□□□ -0.22
BEST1-208ENST00000534553 GPR152Q8TDT2 470 aa13.67□□□□□ -0.22
BEST1-208ENST00000534553 OXNAD1Q96HP4 312 aaPredicted RBP13.67□□□□□ -0.22
BEST1-208ENST00000534553 GORASP1Q9BQQ3 440 aa13.67□□□□□ -0.22
BEST1-208ENST00000534553 GLOD4Q9HC38 313 aa13.67□□□□□ -0.22
BEST1-208ENST00000534553 ENTPD7Q9NQZ7 604 aa13.67□□□□□ -0.22
BEST1-208ENST00000534553 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.67□□□□□ -0.22
BEST1-208ENST00000534553 VPS45Q9NRW7 570 aa13.67□□□□□ -0.22
BEST1-208ENST00000534553 SYBUQ9NX95 663 aa13.67□□□□□ -0.22
BEST1-208ENST00000534553 NSMCE4AQ9NXX6 385 aa13.67□□□□□ -0.22
BEST1-208ENST00000534553 UXTQ9UBK9 157 aaPredicted RBP13.67□□□□□ -0.22
BEST1-208ENST00000534553 IPO11Q9UI26 975 aaKnown RBP13.67□□□□□ -0.22
BEST1-208ENST00000534553 PRDM4Q9UKN5 801 aa13.67□□□□□ -0.22
BEST1-208ENST00000534553 SSX2IPQ9Y2D8 614 aa13.67□□□□□ -0.22
BEST1-208ENST00000534553 LTBP2Q14767 1821 aa13.67□□□□□ -0.22
BEST1-208ENST00000534553 FOXO6A8MYZ6 492 aa13.67□□□□□ -0.22
BEST1-208ENST00000534553 TRIM49D1C9J1S8 452 aa13.67□□□□□ -0.22
BEST1-208ENST00000534553 KIAA0355O15063 1070 aa13.67□□□□□ -0.22
BEST1-208ENST00000534553 SNX3O60493 162 aa13.67□□□□□ -0.22
BEST1-208ENST00000534553 CCNFP41002 786 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms