RNA–Protein interactions for RNA: ENST00000534532.6

NCAPD3-213, Transcript of non-SMC condensin II complex subunit D3, human

TSL 2

Gene NCAPD3, Length 5,539 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NCAPD3-213	ENST00000534532	ADAM28	Q9UKQ2	775 aa		16	■□□□□ 0.15
NCAPD3-213	ENST00000534532	PHTF1	Q9UMS5	762 aa		16	■□□□□ 0.15
NCAPD3-213	ENST00000534532	PCDHA2	Q9Y5H9	948 aa		16	■□□□□ 0.15
NCAPD3-213	ENST00000534532	TM9SF1	O15321	606 aa		16	■□□□□ 0.15
NCAPD3-213	ENST00000534532	RBL1	P28749	1068 aa		16	■□□□□ 0.15
NCAPD3-213	ENST00000534532	CD86	P42081	329 aa		16	■□□□□ 0.15
NCAPD3-213	ENST00000534532	PCID2	Q5JVF3	399 aa		16	■□□□□ 0.15
NCAPD3-213	ENST00000534532	GRAMD4	Q6IC98	578 aa		16	■□□□□ 0.15
NCAPD3-213	ENST00000534532	PLD3	Q8IV08	490 aa		16	■□□□□ 0.15
NCAPD3-213	ENST00000534532	USP7	Q93009	1102 aa		16	■□□□□ 0.15
NCAPD3-213	ENST00000534532	DUSP16	Q9BY84	665 aa		16	■□□□□ 0.15
NCAPD3-213	ENST00000534532	IL22	Q9GZX6	179 aa		16	■□□□□ 0.15
NCAPD3-213	ENST00000534532	TNPO3	Q9Y5L0	923 aa	Known RBP	16	■□□□□ 0.15
NCAPD3-213	ENST00000534532	NR5A2	O00482	541 aa		15.99	■□□□□ 0.15
NCAPD3-213	ENST00000534532	UBD	O15205	165 aa		15.99	■□□□□ 0.15
NCAPD3-213	ENST00000534532	NUDT14	O95848	222 aa		15.99	■□□□□ 0.15
NCAPD3-213	ENST00000534532	NEPRO	Q6NW34	567 aa		15.99	■□□□□ 0.15
NCAPD3-213	ENST00000534532	ABTB1	Q969K4	478 aa	Predicted RBP	15.99	■□□□□ 0.15
NCAPD3-213	ENST00000534532	XPO1	O14980	1071 aa	Known RBP	15.99	■□□□□ 0.15
NCAPD3-213	ENST00000534532	ERBB2	P04626	1255 aa		15.99	■□□□□ 0.15
NCAPD3-213	ENST00000534532	LSP1	P33241	339 aa		15.99	■□□□□ 0.15
NCAPD3-213	ENST00000534532	ITGB3BP	Q13352	177 aa	Predicted RBP	15.99	■□□□□ 0.15
NCAPD3-213	ENST00000534532	C9orf57	Q5W0N0	161 aa		15.99	■□□□□ 0.15
NCAPD3-213	ENST00000534532	CNTNAP1	P78357	1384 aa		15.99	■□□□□ 0.15
NCAPD3-213	ENST00000534532	OPLAH	O14841	1288 aa		15.99	■□□□□ 0.15
NCAPD3-213	ENST00000534532	TREH	O43280	583 aa		15.99	■□□□□ 0.15
NCAPD3-213	ENST00000534532	PEX5	P50542	639 aa		15.99	■□□□□ 0.15
NCAPD3-213	ENST00000534532	ZNF280A	P59817	542 aa	Predicted RBP	15.99	■□□□□ 0.15
NCAPD3-213	ENST00000534532	TMED1	Q13445	227 aa		15.99	■□□□□ 0.15
NCAPD3-213	ENST00000534532	GRM3	Q14832	879 aa		15.99	■□□□□ 0.15
NCAPD3-213	ENST00000534532	POM121L1P	Q3SYA9	428 aa		15.99	■□□□□ 0.15
NCAPD3-213	ENST00000534532	ZNF697	Q5TEC3	545 aa		15.99	■□□□□ 0.15
NCAPD3-213	ENST00000534532	NPAS4	Q8IUM7	802 aa		15.99	■□□□□ 0.15
NCAPD3-213	ENST00000534532	MIER2	Q8N344	545 aa		15.99	■□□□□ 0.15
NCAPD3-213	ENST00000534532	ETNPPL	Q8TBG4	499 aa		15.99	■□□□□ 0.15
NCAPD3-213	ENST00000534532	IGF2BP1	Q9NZI8	577 aa	Known RBP eCLIP	15.99	■□□□□ 0.15
NCAPD3-213	ENST00000534532	CFAP97	Q9P2B7	532 aa		15.99	■□□□□ 0.15
NCAPD3-213	ENST00000534532	CCDC189	A1A4V9	331 aa		15.99	■□□□□ 0.15
NCAPD3-213	ENST00000534532	HS6ST1	O60243	411 aa		15.99	■□□□□ 0.15
NCAPD3-213	ENST00000534532	SEC22B	O75396	215 aa		15.99	■□□□□ 0.15
NCAPD3-213	ENST00000534532	LGR5	O75473	907 aa		15.99	■□□□□ 0.15
NCAPD3-213	ENST00000534532	ANXA5	P08758	320 aa		15.99	■□□□□ 0.15
NCAPD3-213	ENST00000534532	ATP6V1C1	P21283	382 aa		15.99	■□□□□ 0.15
NCAPD3-213	ENST00000534532	MRPS5	P82675	430 aa	Known RBP	15.99	■□□□□ 0.15
NCAPD3-213	ENST00000534532	CDK16	Q00536	496 aa		15.99	■□□□□ 0.15
NCAPD3-213	ENST00000534532	BRMS1L	Q5PSV4	323 aa		15.99	■□□□□ 0.15
NCAPD3-213	ENST00000534532	LYPLAL1	Q5VWZ2	237 aa		15.99	■□□□□ 0.15
NCAPD3-213	ENST00000534532	GPSM1	Q86YR5	675 aa		15.99	■□□□□ 0.15
NCAPD3-213	ENST00000534532	EPS8L1	Q8TE68	723 aa		15.99	■□□□□ 0.15
NCAPD3-213	ENST00000534532	LRRC39	Q96DD0	335 aa		15.99	■□□□□ 0.15
NCAPD3-213	ENST00000534532	ASB2	Q96Q27	587 aa		15.99	■□□□□ 0.15
NCAPD3-213	ENST00000534532	FTH1	P02794	183 aa		15.99	■□□□□ 0.15
NCAPD3-213	ENST00000534532	RARA	P10276	462 aa		15.99	■□□□□ 0.15
NCAPD3-213	ENST00000534532	PRKCZ	Q05513	592 aa		15.99	■□□□□ 0.15
NCAPD3-213	ENST00000534532	HSPA14	Q0VDF9	509 aa		15.99	■□□□□ 0.15
NCAPD3-213	ENST00000534532	TCEA2	Q15560	299 aa		15.99	■□□□□ 0.15
NCAPD3-213	ENST00000534532	LRRC36	Q1X8D7	754 aa		15.99	■□□□□ 0.15
NCAPD3-213	ENST00000534532	SPATS2L	Q9NUQ6	558 aa	Known RBP	15.99	■□□□□ 0.15
NCAPD3-213	ENST00000534532		A0A096LPK6	155 aa		15.98	■□□□□ 0.15
NCAPD3-213	ENST00000534532		A0A0A0MRY4	1105 aa		15.98	■□□□□ 0.15
NCAPD3-213	ENST00000534532	PYGM	P11217	842 aa		15.98	■□□□□ 0.15
NCAPD3-213	ENST00000534532	CPA2	P48052	419 aa		15.98	■□□□□ 0.15
NCAPD3-213	ENST00000534532	ACSM2A	Q08AH3	577 aa		15.98	■□□□□ 0.15
NCAPD3-213	ENST00000534532	ALF	Q53S48	1182 aa		15.98	■□□□□ 0.15
NCAPD3-213	ENST00000534532	ACSM2B	Q68CK6	577 aa		15.98	■□□□□ 0.15
NCAPD3-213	ENST00000534532	PAWR	Q96IZ0	340 aa	Known RBP	15.98	■□□□□ 0.15
NCAPD3-213	ENST00000534532	MAGEB18	Q96M61	343 aa		15.98	■□□□□ 0.15
NCAPD3-213	ENST00000534532	SPATA13	Q96N96	652 aa		15.98	■□□□□ 0.15
NCAPD3-213	ENST00000534532	CDHR5	Q9HBB8	845 aa		15.98	■□□□□ 0.15
NCAPD3-213	ENST00000534532	GTF2A1L	Q9UNN4	478 aa		15.98	■□□□□ 0.15
NCAPD3-213	ENST00000534532	E2F4	Q16254	413 aa		15.98	■□□□□ 0.15
NCAPD3-213	ENST00000534532	ZACN	Q401N2	412 aa		15.98	■□□□□ 0.15
NCAPD3-213	ENST00000534532	TBC1D3D	A0A087WVF3	549 aa		15.98	■□□□□ 0.15
NCAPD3-213	ENST00000534532	TBC1D3I	A0A087WXS9	549 aa		15.98	■□□□□ 0.15
NCAPD3-213	ENST00000534532	TBC1D3E	A0A087X179	549 aa		15.98	■□□□□ 0.15
NCAPD3-213	ENST00000534532	TBC1D3K	A0A087X1G2	549 aa		15.98	■□□□□ 0.15
NCAPD3-213	ENST00000534532		A0A0G2JLL6	359 aa	Predicted RBP	15.98	■□□□□ 0.15
NCAPD3-213	ENST00000534532	TBC1D3F	A6NER0	549 aa	Predicted RBP	15.98	■□□□□ 0.15
NCAPD3-213	ENST00000534532	TBC1D3L	B9A6J9	549 aa		15.98	■□□□□ 0.15
NCAPD3-213	ENST00000534532	TRDMT1	O14717	391 aa	Known RBP	15.98	■□□□□ 0.15
NCAPD3-213	ENST00000534532	DAB1	O75553	588 aa		15.98	■□□□□ 0.15
NCAPD3-213	ENST00000534532	GJB6	O95452	261 aa		15.98	■□□□□ 0.15
NCAPD3-213	ENST00000534532	ZNF682	O95780	498 aa		15.98	■□□□□ 0.15
NCAPD3-213	ENST00000534532	CLTB	P09497	229 aa		15.98	■□□□□ 0.15
NCAPD3-213	ENST00000534532	CNP	P09543	421 aa	Known RBP	15.98	■□□□□ 0.15
NCAPD3-213	ENST00000534532	TBC1D3H	P0C7X1	549 aa		15.98	■□□□□ 0.15
NCAPD3-213	ENST00000534532	CCNB1	P14635	433 aa		15.98	■□□□□ 0.15
NCAPD3-213	ENST00000534532	DMTN	Q08495	405 aa		15.98	■□□□□ 0.15
NCAPD3-213	ENST00000534532	MMRN1	Q13201	1228 aa		15.98	■□□□□ 0.15
NCAPD3-213	ENST00000534532	UGCG	Q16739	394 aa		15.98	■□□□□ 0.15
NCAPD3-213	ENST00000534532	LRRC38	Q5VT99	294 aa		15.98	■□□□□ 0.15
NCAPD3-213	ENST00000534532	TBC1D3G	Q6DHY5	549 aa		15.98	■□□□□ 0.15
NCAPD3-213	ENST00000534532	TBC1D3C	Q6IPX1	549 aa		15.98	■□□□□ 0.15
NCAPD3-213	ENST00000534532	TSHZ1	Q6ZSZ6	1077 aa		15.98	■□□□□ 0.15
NCAPD3-213	ENST00000534532	PRRT2	Q7Z6L0	340 aa	Predicted RBP	15.98	■□□□□ 0.15
NCAPD3-213	ENST00000534532	DNAAF5	Q86Y56	855 aa		15.98	■□□□□ 0.15
NCAPD3-213	ENST00000534532	TBC1D3	Q8IZP1	549 aa	Predicted RBP	15.98	■□□□□ 0.15
NCAPD3-213	ENST00000534532	GALNT4	Q8N4A0	578 aa		15.98	■□□□□ 0.15
NCAPD3-213	ENST00000534532	NKAP	Q8N5F7	415 aa	Known RBP	15.98	■□□□□ 0.15
NCAPD3-213	ENST00000534532	UNK	Q9C0B0	810 aa	Known RBP	15.98	■□□□□ 0.15

Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms