RNA–Protein interactions for RNA: ENST00000534442.5

ECHDC1-223, Transcript of ethylmalonyl-CoA decarboxylase 1, human

TSL 5

Gene ECHDC1, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ECHDC1-223	ENST00000534442	RMDN3	Q96TC7	470 aa		5.08	□□□□□ -1.6
ECHDC1-223	ENST00000534442	MPHOSPH8	Q99549	860 aa		5.08	□□□□□ -1.6
ECHDC1-223	ENST00000534442	GPR20	Q99678	358 aa		5.08	□□□□□ -1.6
ECHDC1-223	ENST00000534442	MESP1	Q9BRJ9	268 aa		5.08	□□□□□ -1.6
ECHDC1-223	ENST00000534442	CNPPD1	Q9BV87	410 aa		5.08	□□□□□ -1.6
ECHDC1-223	ENST00000534442	TM7SF3	Q9NS93	570 aa		5.08	□□□□□ -1.6
ECHDC1-223	ENST00000534442	PPP4R1L	Q9P1A2	415 aa		5.08	□□□□□ -1.6
ECHDC1-223	ENST00000534442	PCDHGA5	Q9Y5G8	931 aa		5.08	□□□□□ -1.6
ECHDC1-223	ENST00000534442	PLXNA4	Q9HCM2	1894 aa		5.08	□□□□□ -1.6
ECHDC1-223	ENST00000534442	DOCK8	Q8NF50	2099 aa		5.08	□□□□□ -1.6
ECHDC1-223	ENST00000534442	FNDC1	Q4ZHG4	1894 aa	Predicted RBP	5.07	□□□□□ -1.6
ECHDC1-223	ENST00000534442	COL6A5	A8TX70	2615 aa		5.07	□□□□□ -1.6
ECHDC1-223	ENST00000534442	MFAP3L	O75121	409 aa		5.07	□□□□□ -1.6
ECHDC1-223	ENST00000534442	VPS4B	O75351	444 aa		5.07	□□□□□ -1.6
ECHDC1-223	ENST00000534442	RASSF9	O75901	435 aa		5.07	□□□□□ -1.6
ECHDC1-223	ENST00000534442	HK1	P19367	917 aa		5.07	□□□□□ -1.6
ECHDC1-223	ENST00000534442	RBMX	P38159	391 aa	Known RBP	5.07	□□□□□ -1.6
ECHDC1-223	ENST00000534442	VIPR2	P41587	438 aa		5.07	□□□□□ -1.6
ECHDC1-223	ENST00000534442	WNT3	P56703	355 aa		5.07	□□□□□ -1.6
ECHDC1-223	ENST00000534442	JAG1	P78504	1218 aa		5.07	□□□□□ -1.6
ECHDC1-223	ENST00000534442	BTG3	Q14201	252 aa	Predicted RBP	5.07	□□□□□ -1.6
ECHDC1-223	ENST00000534442	SURF1	Q15526	300 aa		5.07	□□□□□ -1.6
ECHDC1-223	ENST00000534442	TAF7	Q15545	349 aa	Predicted RBP	5.07	□□□□□ -1.6
ECHDC1-223	ENST00000534442	NPY5R	Q15761	445 aa		5.07	□□□□□ -1.6
ECHDC1-223	ENST00000534442	SHROOM1	Q2M3G4	852 aa	Predicted RBP	5.07	□□□□□ -1.6
ECHDC1-223	ENST00000534442	SPTY2D1	Q68D10	685 aa	Predicted RBP	5.07	□□□□□ -1.6
ECHDC1-223	ENST00000534442	LONP2	Q86WA8	852 aa		5.07	□□□□□ -1.6
ECHDC1-223	ENST00000534442	GAS2L3	Q86XJ1	694 aa		5.07	□□□□□ -1.6
ECHDC1-223	ENST00000534442	TMC8	Q8IU68	726 aa		5.07	□□□□□ -1.6
ECHDC1-223	ENST00000534442	FUK	Q8N0W3	1084 aa		5.07	□□□□□ -1.6
ECHDC1-223	ENST00000534442	MB21D1	Q8N884	522 aa		5.07	□□□□□ -1.6
ECHDC1-223	ENST00000534442	ATG16L2	Q8NAA4	619 aa		5.07	□□□□□ -1.6
ECHDC1-223	ENST00000534442	NSUN7	Q8NE18	718 aa	Known RBP	5.07	□□□□□ -1.6
ECHDC1-223	ENST00000534442	FEZF2	Q8TBJ5	459 aa		5.07	□□□□□ -1.6
ECHDC1-223	ENST00000534442	IPO4	Q8TEX9	1081 aa	Known RBP	5.07	□□□□□ -1.6
ECHDC1-223	ENST00000534442	TBC1D22A	Q8WUA7	517 aa		5.07	□□□□□ -1.6
ECHDC1-223	ENST00000534442	ADAMTS14	Q8WXS8	1223 aa		5.07	□□□□□ -1.6
ECHDC1-223	ENST00000534442	TBC1D20	Q96BZ9	403 aa		5.07	□□□□□ -1.6
ECHDC1-223	ENST00000534442	NELL2	Q99435	816 aa		5.07	□□□□□ -1.6
ECHDC1-223	ENST00000534442	EIF2A	Q9BY44	585 aa	Known RBP	5.07	□□□□□ -1.6
ECHDC1-223	ENST00000534442	SIK2	Q9H0K1	926 aa		5.07	□□□□□ -1.6
ECHDC1-223	ENST00000534442	MYLK2	Q9H1R3	596 aa		5.07	□□□□□ -1.6
ECHDC1-223	ENST00000534442	MAGEH1	Q9H213	219 aa		5.07	□□□□□ -1.6
ECHDC1-223	ENST00000534442	SLC2A4RG	Q9NR83	387 aa		5.07	□□□□□ -1.6
ECHDC1-223	ENST00000534442	RGL1	Q9NZL6	768 aa		5.07	□□□□□ -1.6
ECHDC1-223	ENST00000534442	HSFX1	Q9UBD0	423 aa		5.07	□□□□□ -1.6
ECHDC1-223	ENST00000534442	CAPN11	Q9UMQ6	739 aa		5.07	□□□□□ -1.6
ECHDC1-223	ENST00000534442	CLCA2	Q9UQC9	943 aa		5.07	□□□□□ -1.6
ECHDC1-223	ENST00000534442	SLC30A1	Q9Y6M5	507 aa		5.07	□□□□□ -1.6
ECHDC1-223	ENST00000534442	NBAS	A2RRP1	2371 aa		5.07	□□□□□ -1.6
ECHDC1-223	ENST00000534442	BSN	Q9UPA5	3926 aa		5.07	□□□□□ -1.6
ECHDC1-223	ENST00000534442	KIAA1671	Q9BY89	1806 aa		5.07	□□□□□ -1.6
ECHDC1-223	ENST00000534442	AQP12B	A6NM10	295 aa		5.06	□□□□□ -1.6
ECHDC1-223	ENST00000534442	RAB27B	O00194	218 aa		5.06	□□□□□ -1.6
ECHDC1-223	ENST00000534442	LEFTY2	O00292	366 aa		5.06	□□□□□ -1.6
ECHDC1-223	ENST00000534442	PODXL	O00592	558 aa		5.06	□□□□□ -1.6
ECHDC1-223	ENST00000534442	RRP8	O43159	456 aa	Known RBP	5.06	□□□□□ -1.6
ECHDC1-223	ENST00000534442	FOXS1	O43638	330 aa		5.06	□□□□□ -1.6
ECHDC1-223	ENST00000534442	IPO13	O94829	963 aa	Known RBP	5.06	□□□□□ -1.6
ECHDC1-223	ENST00000534442	SIX3	O95343	332 aa	Predicted RBP	5.06	□□□□□ -1.6
ECHDC1-223	ENST00000534442	PCCA	P05165	728 aa	Predicted RBP	5.06	□□□□□ -1.6
ECHDC1-223	ENST00000534442	MGAT1	P26572	445 aa		5.06	□□□□□ -1.6
ECHDC1-223	ENST00000534442	ACVR2A	P27037	513 aa		5.06	□□□□□ -1.6
ECHDC1-223	ENST00000534442	HIBADH	P31937	336 aa	Known RBP	5.06	□□□□□ -1.6
ECHDC1-223	ENST00000534442	COPA	P53621	1224 aa		5.06	□□□□□ -1.6
ECHDC1-223	ENST00000534442	BIRC3	Q13489	604 aa		5.06	□□□□□ -1.6
ECHDC1-223	ENST00000534442	SPARCL1	Q14515	664 aa		5.06	□□□□□ -1.6
ECHDC1-223	ENST00000534442	MLF2	Q15773	248 aa	Predicted RBP	5.06	□□□□□ -1.6
ECHDC1-223	ENST00000534442	PTGIS	Q16647	500 aa		5.06	□□□□□ -1.6
ECHDC1-223	ENST00000534442	FAM102A	Q5T9C2	384 aa	Predicted RBP	5.06	□□□□□ -1.6
ECHDC1-223	ENST00000534442	FCRL6	Q6DN72	434 aa		5.06	□□□□□ -1.6
ECHDC1-223	ENST00000534442	MAMDC4	Q6UXC1	1216 aa		5.06	□□□□□ -1.6
ECHDC1-223	ENST00000534442	KIAA0408	Q6ZU52	694 aa		5.06	□□□□□ -1.6
ECHDC1-223	ENST00000534442	USP49	Q70CQ1	688 aa		5.06	□□□□□ -1.6
ECHDC1-223	ENST00000534442	PIP4P1	Q86T03	277 aa		5.06	□□□□□ -1.6
ECHDC1-223	ENST00000534442	KBTBD6	Q86V97	674 aa		5.06	□□□□□ -1.6
ECHDC1-223	ENST00000534442	MARCH9	Q86YJ5	346 aa		5.06	□□□□□ -1.6
ECHDC1-223	ENST00000534442	C1QL4	Q86Z23	238 aa		5.06	□□□□□ -1.6
ECHDC1-223	ENST00000534442	YAF2	Q8IY57	180 aa		5.06	□□□□□ -1.6
ECHDC1-223	ENST00000534442	D2HGDH	Q8N465	521 aa		5.06	□□□□□ -1.6
ECHDC1-223	ENST00000534442	ZNF384	Q8TF68	577 aa		5.06	□□□□□ -1.6
ECHDC1-223	ENST00000534442	IPCEF1	Q8WWN9	437 aa	Predicted RBP	5.06	□□□□□ -1.6
ECHDC1-223	ENST00000534442	C12orf42	Q96LP6	360 aa		5.06	□□□□□ -1.6
ECHDC1-223	ENST00000534442	SLC46A1	Q96NT5	459 aa		5.06	□□□□□ -1.6
ECHDC1-223	ENST00000534442	TMEM120A	Q9BXJ8	343 aa		5.06	□□□□□ -1.6
ECHDC1-223	ENST00000534442	IDI2	Q9BXS1	227 aa		5.06	□□□□□ -1.6
ECHDC1-223	ENST00000534442	MAGEB5	Q9BZ81	275 aa		5.06	□□□□□ -1.6
ECHDC1-223	ENST00000534442	MAF1	Q9H063	256 aa		5.06	□□□□□ -1.6
ECHDC1-223	ENST00000534442	ABHD16B	Q9H3Z7	469 aa		5.06	□□□□□ -1.6
ECHDC1-223	ENST00000534442	CASS4	Q9NQ75	786 aa		5.06	□□□□□ -1.6
ECHDC1-223	ENST00000534442	DDX4	Q9NQI0	724 aa	Known RBP	5.06	□□□□□ -1.6
ECHDC1-223	ENST00000534442	CDYL	Q9Y232	598 aa		5.06	□□□□□ -1.6
ECHDC1-223	ENST00000534442	ZBTB32	Q9Y2Y4	487 aa	Predicted RBP	5.06	□□□□□ -1.6
ECHDC1-223	ENST00000534442	SPAG17	Q6Q759	2223 aa		5.06	□□□□□ -1.6
ECHDC1-223	ENST00000534442	TG	P01266	2768 aa		5.06	□□□□□ -1.6
ECHDC1-223	ENST00000534442	CSPG4	Q6UVK1	2322 aa		5.06	□□□□□ -1.6
ECHDC1-223	ENST00000534442	SCN10A	Q9Y5Y9	1956 aa		5.05	□□□□□ -1.6
ECHDC1-223	ENST00000534442	LOC102723971	A0A1B0GUV8	181 aa		5.05	□□□□□ -1.6
ECHDC1-223	ENST00000534442		H7C4K7	107 aa		5.05	□□□□□ -1.6
ECHDC1-223	ENST00000534442	SYT5	O00445	386 aa		5.05	□□□□□ -1.6

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