RNA–Protein interactions for RNA: ENST00000534320.5

PHRF1-206, Transcript of PHD and ring finger domains 1, humanhuman

TSL 5

Gene PHRF1, Length 5,178 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-206ENST00000534320 FZD9O00144 591 aa17.54■□□□□ 0.4
PHRF1-206ENST00000534320 CLEC4FQ8N1N0 589 aa17.54■□□□□ 0.4
PHRF1-206ENST00000534320 GINS4Q9BRT9 223 aa17.54■□□□□ 0.4
PHRF1-206ENST00000534320 SMPD4Q9NXE4 827 aa17.54■□□□□ 0.4
PHRF1-206ENST00000534320 AJAP1Q9UKB5 411 aaPredicted RBP17.54■□□□□ 0.4
PHRF1-206ENST00000534320 FCHO1O14526 889 aa17.54■□□□□ 0.4
PHRF1-206ENST00000534320 TSPAN3O60637 253 aa17.54■□□□□ 0.4
PHRF1-206ENST00000534320 PAX3P23760 479 aa17.54■□□□□ 0.4
PHRF1-206ENST00000534320 CRADDP78560 199 aa17.54■□□□□ 0.4
PHRF1-206ENST00000534320 AASDHQ4L235 1098 aaPredicted RBP17.54■□□□□ 0.4
PHRF1-206ENST00000534320 TMC7Q7Z402 723 aa17.54■□□□□ 0.4
PHRF1-206ENST00000534320 IL22Q9GZX6 179 aa17.54■□□□□ 0.4
PHRF1-206ENST00000534320 PCDH18Q9HCL0 1135 aa17.54■□□□□ 0.4
PHRF1-206ENST00000534320 MPP6Q9NZW5 540 aa17.54■□□□□ 0.4
PHRF1-206ENST00000534320 ALS2Q96Q42 1657 aa17.54■□□□□ 0.4
PHRF1-206ENST00000534320 DOT1LQ8TEK3 1739 aa17.54■□□□□ 0.4
PHRF1-206ENST00000534320 ALOX15BO15296 676 aa17.53■□□□□ 0.4
PHRF1-206ENST00000534320 MSCO60682 206 aa17.53■□□□□ 0.4
PHRF1-206ENST00000534320 TPBGLP0DKB5 382 aa17.53■□□□□ 0.4
PHRF1-206ENST00000534320 DDX5P17844 614 aaKnown RBP17.53■□□□□ 0.4
PHRF1-206ENST00000534320 RETSATQ6NUM9 610 aa17.53■□□□□ 0.4
PHRF1-206ENST00000534320 OXNAD1Q96HP4 312 aaPredicted RBP17.53■□□□□ 0.4
PHRF1-206ENST00000534320 CAAP1Q9H8G2 361 aa17.53■□□□□ 0.4
PHRF1-206ENST00000534320 APOBEC3GQ9HC16 384 aaKnown RBP17.53■□□□□ 0.4
PHRF1-206ENST00000534320 PCDHB12Q9Y5F1 795 aa17.53■□□□□ 0.4
PHRF1-206ENST00000534320 PCDHA11Q9Y5I1 949 aa17.53■□□□□ 0.4
PHRF1-206ENST00000534320 ZNF536O15090 1300 aa17.53■□□□□ 0.4
PHRF1-206ENST00000534320 ZSCAN9O15535 394 aaPredicted RBP17.53■□□□□ 0.4
PHRF1-206ENST00000534320 CYP1A1P04798 512 aaPredicted RBP17.53■□□□□ 0.4
PHRF1-206ENST00000534320 PRKAA1Q13131 559 aa17.53■□□□□ 0.4
PHRF1-206ENST00000534320 CHADLQ6NUI6 762 aa17.53■□□□□ 0.4
PHRF1-206ENST00000534320 TTC33Q6PID6 262 aaPredicted RBP17.53■□□□□ 0.4
PHRF1-206ENST00000534320 FAM35AQ86V20 835 aa17.53■□□□□ 0.4
PHRF1-206ENST00000534320 EXOC3L1Q86VI1 746 aa17.53■□□□□ 0.4
PHRF1-206ENST00000534320 MYO1HQ8N1T3 1032 aa17.53■□□□□ 0.4
PHRF1-206ENST00000534320 B3GNT5Q9BYG0 378 aa17.53■□□□□ 0.4
PHRF1-206ENST00000534320 EFR3BQ9Y2G0 817 aa17.53■□□□□ 0.4
PHRF1-206ENST00000534320 ANKRD6Q9Y2G4 727 aa17.53■□□□□ 0.4
PHRF1-206ENST00000534320 MMP13P45452 471 aa17.53■□□□□ 0.4
PHRF1-206ENST00000534320 SYT17Q9BSW7 474 aa17.53■□□□□ 0.4
PHRF1-206ENST00000534320 ACSS3Q9H6R3 686 aa17.53■□□□□ 0.4
PHRF1-206ENST00000534320 GOLGA2P5Q9HBQ8 144 aa17.53■□□□□ 0.4
PHRF1-206ENST00000534320 NMRK2Q9NPI5 230 aa17.53■□□□□ 0.4
PHRF1-206ENST00000534320 TCF7L2Q9NQB0 619 aa17.53■□□□□ 0.4
PHRF1-206ENST00000534320 BAZ2AQ9UIF9 1905 aaKnown RBP17.53■□□□□ 0.4
PHRF1-206ENST00000534320 CDK7P50613 346 aa17.53■□□□□ 0.4
PHRF1-206ENST00000534320 HADHBP55084 474 aaKnown RBP17.53■□□□□ 0.4
PHRF1-206ENST00000534320 BTG3Q14201 252 aaPredicted RBP17.53■□□□□ 0.4
PHRF1-206ENST00000534320 NOMO2Q5JPE7 1267 aa17.53■□□□□ 0.4
PHRF1-206ENST00000534320 FNIP1Q8TF40 1166 aa17.53■□□□□ 0.4
PHRF1-206ENST00000534320 LGMNQ99538 433 aa17.53■□□□□ 0.4
PHRF1-206ENST00000534320 ZCCHC23Q6ZST2 131 aa17.52■□□□□ 0.4
PHRF1-206ENST00000534320 LRRN4Q8WUT4 740 aa17.52■□□□□ 0.4
PHRF1-206ENST00000534320 PMM2O15305 246 aa17.52■□□□□ 0.4
PHRF1-206ENST00000534320 MTA2O94776 668 aa17.52■□□□□ 0.4
PHRF1-206ENST00000534320 SP3Q02447 781 aa17.52■□□□□ 0.4
PHRF1-206ENST00000534320 TRIM69Q86WT6 500 aa17.52■□□□□ 0.4
PHRF1-206ENST00000534320 SNX3O60493 162 aa17.52■□□□□ 0.4
PHRF1-206ENST00000534320 CAPN1P07384 714 aa17.52■□□□□ 0.4
PHRF1-206ENST00000534320 PRKAR2AP13861 404 aaKnown RBP17.52■□□□□ 0.4
PHRF1-206ENST00000534320 ERCC2P18074 760 aa17.52■□□□□ 0.4
PHRF1-206ENST00000534320 BNC2Q6ZN30 1099 aaPredicted RBP17.52■□□□□ 0.4
PHRF1-206ENST00000534320 EMILIN2Q9BXX0 1053 aa17.52■□□□□ 0.4
PHRF1-206ENST00000534320 DCLRE1BQ9H816 532 aa17.52■□□□□ 0.4
PHRF1-206ENST00000534320 RGS18Q9NS28 235 aa17.52■□□□□ 0.4
PHRF1-206ENST00000534320 CNTNAP1P78357 1384 aa17.52■□□□□ 0.39
PHRF1-206ENST00000534320 TPP1O14773 563 aa17.52■□□□□ 0.39
PHRF1-206ENST00000534320 LRCH4O75427 683 aa17.52■□□□□ 0.39
PHRF1-206ENST00000534320 GSNP06396 782 aa17.52■□□□□ 0.39
PHRF1-206ENST00000534320 NFKB1P19838 968 aa17.52■□□□□ 0.39
PHRF1-206ENST00000534320 PRKAA2P54646 552 aa17.52■□□□□ 0.39
PHRF1-206ENST00000534320 PTP4A2Q12974 167 aa17.52■□□□□ 0.39
PHRF1-206ENST00000534320 GRIK3Q13003 919 aa17.52■□□□□ 0.39
PHRF1-206ENST00000534320 PHF21AQ96BD5 680 aa17.52■□□□□ 0.39
PHRF1-206ENST00000534320 C17orf80Q9BSJ5 609 aa17.52■□□□□ 0.39
PHRF1-206ENST00000534320 BBS2Q9BXC9 721 aa17.52■□□□□ 0.39
PHRF1-206ENST00000534320 MYLK2Q9H1R3 596 aa17.52■□□□□ 0.39
PHRF1-206ENST00000534320 RBPJLQ9UBG7 517 aa17.52■□□□□ 0.39
PHRF1-206ENST00000534320 MORF4L1Q9UBU8 362 aa17.52■□□□□ 0.39
PHRF1-206ENST00000534320 TTLL13PA6NNM8 815 aa17.51■□□□□ 0.39
PHRF1-206ENST00000534320 MYL4P12829 197 aa17.51■□□□□ 0.39
PHRF1-206ENST00000534320 TFE3P19532 575 aaPredicted RBP17.51■□□□□ 0.39
PHRF1-206ENST00000534320 PPP3CCP48454 512 aa17.51■□□□□ 0.39
PHRF1-206ENST00000534320 PHF21BQ96EK2 531 aa17.51■□□□□ 0.39
PHRF1-206ENST00000534320 NMRAL1Q9HBL8 299 aa17.51■□□□□ 0.39
PHRF1-206ENST00000534320 MCM8Q9UJA3 840 aa17.51■□□□□ 0.39
PHRF1-206ENST00000534320 DTNAQ9Y4J8 743 aa17.51■□□□□ 0.39
PHRF1-206ENST00000534320 TREHO43280 583 aa17.51■□□□□ 0.39
PHRF1-206ENST00000534320 SLC25A52Q3SY17 297 aa17.51■□□□□ 0.39
PHRF1-206ENST00000534320 XRCC4Q13426 336 aa17.51■□□□□ 0.39
PHRF1-206ENST00000534320 PCID2Q5JVF3 399 aa17.51■□□□□ 0.39
PHRF1-206ENST00000534320 DCLRE1AQ6PJP8 1040 aa17.51■□□□□ 0.39
PHRF1-206ENST00000534320 ADCK2Q7Z695 626 aa17.51■□□□□ 0.39
PHRF1-206ENST00000534320 GMLQ99445 158 aa17.51■□□□□ 0.39
PHRF1-206ENST00000534320 TRIM17Q9Y577 477 aa17.51■□□□□ 0.39
PHRF1-206ENST00000534320 ZBTB48P10074 688 aaPredicted RBP17.51■□□□□ 0.39
PHRF1-206ENST00000534320 SMPD1P17405 629 aa17.51■□□□□ 0.39
PHRF1-206ENST00000534320 ILF2Q12905 390 aaKnown RBP17.51■□□□□ 0.39
PHRF1-206ENST00000534320 NOMO1Q15155 1222 aa17.51■□□□□ 0.39
PHRF1-206ENST00000534320 C16orf46Q6P387 395 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms