RNA–Protein interactions for RNA: ENST00000533776.1

BRCA2-205, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 3

Gene BRCA2, Length 523 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-205ENST00000533776 MS4A18H0YCH9 400 aa3.25□□□□□ -1.89
BRCA2-205ENST00000533776 RPP40O75818 363 aaKnown RBP3.25□□□□□ -1.89
BRCA2-205ENST00000533776 NTSR2O95665 410 aa3.25□□□□□ -1.89
BRCA2-205ENST00000533776 ANXA6P08133 673 aa3.25□□□□□ -1.89
BRCA2-205ENST00000533776 ITGB8P26012 769 aa3.25□□□□□ -1.89
BRCA2-205ENST00000533776 AKT1P31749 480 aa3.25□□□□□ -1.89
BRCA2-205ENST00000533776 ADPRHP54922 357 aa3.25□□□□□ -1.89
BRCA2-205ENST00000533776 FOXL2P58012 376 aa3.25□□□□□ -1.89
BRCA2-205ENST00000533776 FAM3BP58499 235 aaPredicted RBP3.25□□□□□ -1.89
BRCA2-205ENST00000533776 EEF1A2Q05639 463 aaKnown RBP3.25□□□□□ -1.89
BRCA2-205ENST00000533776 RNASELQ05823 741 aaKnown RBP3.25□□□□□ -1.89
BRCA2-205ENST00000533776 KIF5AQ12840 1032 aa3.25□□□□□ -1.89
BRCA2-205ENST00000533776 DUSP6Q16828 381 aa3.25□□□□□ -1.89
BRCA2-205ENST00000533776 OTUD3Q5T2D3 398 aaPredicted RBP3.25□□□□□ -1.89
BRCA2-205ENST00000533776 AAGABQ6PD74 315 aa3.25□□□□□ -1.89
BRCA2-205ENST00000533776 ZNF367Q7RTV3 350 aa3.25□□□□□ -1.89
BRCA2-205ENST00000533776 TRABD2AQ86V40 505 aa3.25□□□□□ -1.89
BRCA2-205ENST00000533776 IGFN1Q86VF2 1251 aa3.25□□□□□ -1.89
BRCA2-205ENST00000533776 FJX1Q86VR8 437 aa3.25□□□□□ -1.89
BRCA2-205ENST00000533776 TMEM217Q8N7C4 229 aa3.25□□□□□ -1.89
BRCA2-205ENST00000533776 ZNF566Q969W8 418 aa3.25□□□□□ -1.89
BRCA2-205ENST00000533776 C8orf48Q96LL4 319 aa3.25□□□□□ -1.89
BRCA2-205ENST00000533776 FRMD8Q9BZ67 464 aaPredicted RBP3.25□□□□□ -1.89
BRCA2-205ENST00000533776 CCDC134Q9H6E4 229 aa3.25□□□□□ -1.89
BRCA2-205ENST00000533776 TBC1D3DA0A087WVF3 549 aa3.24□□□□□ -1.89
BRCA2-205ENST00000533776 TBC1D3IA0A087WXS9 549 aa3.24□□□□□ -1.89
BRCA2-205ENST00000533776 TBC1D3EA0A087X179 549 aa3.24□□□□□ -1.89
BRCA2-205ENST00000533776 TBC1D3KA0A087X1G2 549 aa3.24□□□□□ -1.89
BRCA2-205ENST00000533776 TBC1D3BA6NDS4 549 aa3.24□□□□□ -1.89
BRCA2-205ENST00000533776 TBC1D3FA6NER0 549 aaPredicted RBP3.24□□□□□ -1.89
BRCA2-205ENST00000533776 SAC3D1A6NKF1 404 aa3.24□□□□□ -1.89
BRCA2-205ENST00000533776 TBC1D3LB9A6J9 549 aa3.24□□□□□ -1.89
BRCA2-205ENST00000533776 STMND1H3BQB6 276 aa3.24□□□□□ -1.89
BRCA2-205ENST00000533776 GLP2RO95838 553 aa3.24□□□□□ -1.89
BRCA2-205ENST00000533776 MYL3P08590 195 aa3.24□□□□□ -1.89
BRCA2-205ENST00000533776 TBC1D3HP0C7X1 549 aa3.24□□□□□ -1.89
BRCA2-205ENST00000533776 TNFSF4P23510 183 aa3.24□□□□□ -1.89
BRCA2-205ENST00000533776 EEF1GP26641 437 aaKnown RBP3.24□□□□□ -1.89
BRCA2-205ENST00000533776 ZBTB16Q05516 673 aa3.24□□□□□ -1.89
BRCA2-205ENST00000533776 HNF4GQ14541 408 aa3.24□□□□□ -1.89
BRCA2-205ENST00000533776 PLCB4Q15147 1175 aa3.24□□□□□ -1.89
BRCA2-205ENST00000533776 RAB30Q15771 203 aa3.24□□□□□ -1.89
BRCA2-205ENST00000533776 COBLL1Q53SF7 1204 aa3.24□□□□□ -1.89
BRCA2-205ENST00000533776 FAM209BQ5JX69 171 aa3.24□□□□□ -1.89
BRCA2-205ENST00000533776 TBC1D3GQ6DHY5 549 aa3.24□□□□□ -1.89
BRCA2-205ENST00000533776 TBC1D3CQ6IPX1 549 aa3.24□□□□□ -1.89
BRCA2-205ENST00000533776 RINT1Q6NUQ1 792 aa3.24□□□□□ -1.89
BRCA2-205ENST00000533776 CCAR1Q8IX12 1150 aaKnown RBP3.24□□□□□ -1.89
BRCA2-205ENST00000533776 TBC1D3Q8IZP1 549 aaPredicted RBP3.24□□□□□ -1.89
BRCA2-205ENST00000533776 IPO4Q8TEX9 1081 aaKnown RBP3.24□□□□□ -1.89
BRCA2-205ENST00000533776 CLEC4CQ8WTT0 213 aa3.24□□□□□ -1.89
BRCA2-205ENST00000533776 TMED6Q8WW62 240 aa3.24□□□□□ -1.89
BRCA2-205ENST00000533776 RTP4Q96DX8 246 aa3.24□□□□□ -1.89
BRCA2-205ENST00000533776 SORBS1Q9BX66 1292 aaKnown RBP3.24□□□□□ -1.89
BRCA2-205ENST00000533776 C1QTNF4Q9BXJ3 329 aa3.24□□□□□ -1.89
BRCA2-205ENST00000533776 TMEM120AQ9BXJ8 343 aa3.24□□□□□ -1.89
BRCA2-205ENST00000533776 RETREG1Q9H6L5 497 aa3.24□□□□□ -1.89
BRCA2-205ENST00000533776 SLC52A1Q9NWF4 448 aa3.24□□□□□ -1.89
BRCA2-205ENST00000533776 ARL15Q9NXU5 204 aa3.24□□□□□ -1.89
BRCA2-205ENST00000533776 KCNG2Q9UJ96 466 aa3.24□□□□□ -1.89
BRCA2-205ENST00000533776 DTX4Q9Y2E6 619 aa3.24□□□□□ -1.89
BRCA2-205ENST00000533776 CEP83Q9Y592 693 aa3.24□□□□□ -1.89
BRCA2-205ENST00000533776 COPG1Q9Y678 874 aaKnown RBP3.24□□□□□ -1.89
BRCA2-205ENST00000533776 SLC4A4Q9Y6R1 1079 aa3.24□□□□□ -1.89
BRCA2-205ENST00000533776 CYP3A7-CYP3A51PA0A087WV96 503 aa3.23□□□□□ -1.89
BRCA2-205ENST00000533776 TCRBV7S3A2A0A539 114 aa3.23□□□□□ -1.89
BRCA2-205ENST00000533776 KIF28PB7ZC32 967 aa3.23□□□□□ -1.89
BRCA2-205ENST00000533776 VWA5AO00534 786 aa3.23□□□□□ -1.89
BRCA2-205ENST00000533776 PMM2O15305 246 aa3.23□□□□□ -1.89
BRCA2-205ENST00000533776 CYP3A4P08684 503 aa3.23□□□□□ -1.89
BRCA2-205ENST00000533776 CYP3A7P24462 503 aa3.23□□□□□ -1.89
BRCA2-205ENST00000533776 PPP3CCP48454 512 aa3.23□□□□□ -1.89
BRCA2-205ENST00000533776 ALDH18A1P54886 795 aaKnown RBP3.23□□□□□ -1.89
BRCA2-205ENST00000533776 HILS1P60008 231 aa3.23□□□□□ -1.89
BRCA2-205ENST00000533776 SEC61A1P61619 476 aaKnown RBP3.23□□□□□ -1.89
BRCA2-205ENST00000533776 RHAGQ02094 409 aa3.23□□□□□ -1.89
BRCA2-205ENST00000533776 HLFQ16534 295 aa3.23□□□□□ -1.89
BRCA2-205ENST00000533776 ZNF718Q3SXZ3 478 aa3.23□□□□□ -1.89
BRCA2-205ENST00000533776 TDRD12Q587J7 1177 aaKnown RBP3.23□□□□□ -1.89
BRCA2-205ENST00000533776 ARL6IP4Q66PJ3 421 aaKnown RBP3.23□□□□□ -1.89
BRCA2-205ENST00000533776 C8orf82Q6P1X6 216 aaPredicted RBP3.23□□□□□ -1.89
BRCA2-205ENST00000533776 TMEM71Q6P5X7 295 aa3.23□□□□□ -1.89
BRCA2-205ENST00000533776 H1FNTQ75WM6 255 aaPredicted RBP3.23□□□□□ -1.89
BRCA2-205ENST00000533776 CLIP4Q8N3C7 705 aa3.23□□□□□ -1.89
BRCA2-205ENST00000533776 HORMAD2Q8N7B1 307 aa3.23□□□□□ -1.89
BRCA2-205ENST00000533776 OR14A16Q8NHC5 309 aa3.23□□□□□ -1.89
BRCA2-205ENST00000533776 FAM110DQ8TAY7 271 aaPredicted RBP3.23□□□□□ -1.89
BRCA2-205ENST00000533776 BICD2Q8TD16 824 aa3.23□□□□□ -1.89
BRCA2-205ENST00000533776 WDR60Q8WVS4 1066 aa3.23□□□□□ -1.89
BRCA2-205ENST00000533776 CCDC136Q96JN2 1154 aa3.23□□□□□ -1.89
BRCA2-205ENST00000533776 MECRQ9BV79 373 aa3.23□□□□□ -1.89
BRCA2-205ENST00000533776 ACTR5Q9H9F9 607 aaPredicted RBP3.23□□□□□ -1.89
BRCA2-205ENST00000533776 NECTIN3Q9NQS3 549 aa3.23□□□□□ -1.89
BRCA2-205ENST00000533776 ZBTB1Q9Y2K1 713 aa3.23□□□□□ -1.89
BRCA2-205ENST00000533776 RAP2CQ9Y3L5 183 aa3.23□□□□□ -1.89
BRCA2-205ENST00000533776 SRRM3A6NNA2 597 aaPredicted RBP3.22□□□□□ -1.89
BRCA2-205ENST00000533776 APAF1O14727 1248 aa3.22□□□□□ -1.89
BRCA2-205ENST00000533776 SOCS5O75159 536 aa3.22□□□□□ -1.89
BRCA2-205ENST00000533776 ZNF12P17014 697 aa3.22□□□□□ -1.89
BRCA2-205ENST00000533776 TCEA1P23193 301 aaKnown RBP3.22□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms