RNA–Protein interactions for RNA: ENST00000533756.5

PACS1-213, Transcript of phosphofurin acidic cluster sorting protein 1, humanhuman

TSL 4

Gene PACS1, Length 578 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1-213ENST00000533756 TP53INP2Q8IXH6 220 aa9.27□□□□□ -0.93
PACS1-213ENST00000533756 MYCT1Q8N699 235 aa9.27□□□□□ -0.93
PACS1-213ENST00000533756 ZNF557Q8N988 423 aaPredicted RBP9.27□□□□□ -0.93
PACS1-213ENST00000533756 ZMIZ2Q8NF64 920 aa9.27□□□□□ -0.93
PACS1-213ENST00000533756 TMA16Q96EY4 203 aaKnown RBP9.27□□□□□ -0.93
PACS1-213ENST00000533756 ANKRD36BP1Q96IX9 119 aa9.27□□□□□ -0.93
PACS1-213ENST00000533756 HAPLN3Q96S86 360 aa9.27□□□□□ -0.93
PACS1-213ENST00000533756 FAM213AQ9BRX8 229 aa9.27□□□□□ -0.93
PACS1-213ENST00000533756 MED10Q9BTT4 135 aa9.27□□□□□ -0.93
PACS1-213ENST00000533756 EFHD1Q9BUP0 239 aa9.27□□□□□ -0.93
PACS1-213ENST00000533756 SLC29A3Q9BZD2 475 aa9.27□□□□□ -0.93
PACS1-213ENST00000533756 MTMR12Q9C0I1 747 aa9.27□□□□□ -0.93
PACS1-213ENST00000533756 NMUR1Q9HB89 426 aa9.27□□□□□ -0.93
PACS1-213ENST00000533756 CSNK1G1Q9HCP0 422 aa9.27□□□□□ -0.93
PACS1-213ENST00000533756 GPR27Q9NS67 375 aa9.27□□□□□ -0.93
PACS1-213ENST00000533756 PCDHGA3Q9Y5H0 932 aa9.27□□□□□ -0.93
PACS1-213ENST00000533756 SPTY2D1-AS1A0A0U1RR47 76 aa9.26□□□□□ -0.93
PACS1-213ENST00000533756 A0A1W2PQH9 124 aa9.26□□□□□ -0.93
PACS1-213ENST00000533756 A0A1W2PQM1 296 aa9.26□□□□□ -0.93
PACS1-213ENST00000533756 TULP1O00294 542 aaPredicted RBP9.26□□□□□ -0.93
PACS1-213ENST00000533756 AP1G2O75843 785 aa9.26□□□□□ -0.93
PACS1-213ENST00000533756 SRPRAP08240 638 aaKnown RBP9.26□□□□□ -0.93
PACS1-213ENST00000533756 RALAP11233 206 aa9.26□□□□□ -0.93
PACS1-213ENST00000533756 HNRNPA2B1P22626 353 aaKnown RBP9.26□□□□□ -0.93
PACS1-213ENST00000533756 VARSP26640 1264 aaKnown RBP9.26□□□□□ -0.93
PACS1-213ENST00000533756 UGT1A3P35503 534 aa9.26□□□□□ -0.93
PACS1-213ENST00000533756 ZNF131P52739 623 aa9.26□□□□□ -0.93
PACS1-213ENST00000533756 SLC12A3P55017 1021 aa9.26□□□□□ -0.93
PACS1-213ENST00000533756 CCL7P80098 99 aa9.26□□□□□ -0.93
PACS1-213ENST00000533756 MC1RQ01726 317 aa9.26□□□□□ -0.93
PACS1-213ENST00000533756 MRPL49Q13405 166 aaKnown RBP9.26□□□□□ -0.93
PACS1-213ENST00000533756 FZD2Q14332 565 aa9.26□□□□□ -0.93
PACS1-213ENST00000533756 ARSHQ5FYA8 562 aa9.26□□□□□ -0.93
PACS1-213ENST00000533756 NEK5Q6P3R8 708 aa9.26□□□□□ -0.93
PACS1-213ENST00000533756 Q6ZSR6 202 aa9.26□□□□□ -0.93
PACS1-213ENST00000533756 PARGQ86W56 976 aa9.26□□□□□ -0.93
PACS1-213ENST00000533756 LMX1AQ8TE12 382 aa9.26□□□□□ -0.93
PACS1-213ENST00000533756 BTN2A2Q8WVV5 523 aa9.26□□□□□ -0.93
PACS1-213ENST00000533756 PPP1R13BQ96KQ4 1090 aa9.26□□□□□ -0.93
PACS1-213ENST00000533756 MRGPRX3Q96LB0 322 aa9.26□□□□□ -0.93
PACS1-213ENST00000533756 NOX5Q96PH1 765 aa9.26□□□□□ -0.93
PACS1-213ENST00000533756 SMOQ99835 787 aa9.26□□□□□ -0.93
PACS1-213ENST00000533756 PARVGQ9HBI0 331 aa9.26□□□□□ -0.93
PACS1-213ENST00000533756 INTS13Q9NVM9 706 aa9.26□□□□□ -0.93
PACS1-213ENST00000533756 RBAKQ9NYW8 714 aaPredicted RBP9.26□□□□□ -0.93
PACS1-213ENST00000533756 CLIC5Q9NZA1 410 aa9.26□□□□□ -0.93
PACS1-213ENST00000533756 KCTD3Q9Y597 815 aa9.26□□□□□ -0.93
PACS1-213ENST00000533756 HS3ST3A1Q9Y663 406 aa9.26□□□□□ -0.93
PACS1-213ENST00000533756 MYH11P35749 1972 aa9.26□□□□□ -0.93
PACS1-213ENST00000533756 RP1L1Q8IWN7 2480 aaPredicted RBP9.26□□□□□ -0.93
PACS1-213ENST00000533756 ITIH6Q6UXX5 1313 aa9.26□□□□□ -0.93
PACS1-213ENST00000533756 TDRD6O60522 2096 aaKnown RBP9.25□□□□□ -0.93
PACS1-213ENST00000533756 ANKHD1Q8IWZ3 2542 aaKnown RBP9.25□□□□□ -0.93
PACS1-213ENST00000533756 RP1P56715 2156 aa9.25□□□□□ -0.93
PACS1-213ENST00000533756 NPHP3-ACAD11A0A0J9YXS1 232 aa9.25□□□□□ -0.93
PACS1-213ENST00000533756 A6NNZ2 444 aa9.25□□□□□ -0.93
PACS1-213ENST00000533756 DUX1O43812 170 aa9.25□□□□□ -0.93
PACS1-213ENST00000533756 TNNC2P02585 160 aa9.25□□□□□ -0.93
PACS1-213ENST00000533756 RPLP0P05388 317 aaKnown RBP9.25□□□□□ -0.93
PACS1-213ENST00000533756 HMBSP08397 361 aa9.25□□□□□ -0.93
PACS1-213ENST00000533756 PRKAR1AP10644 381 aa9.25□□□□□ -0.93
PACS1-213ENST00000533756 MZF1P28698 734 aaPredicted RBP9.25□□□□□ -0.93
PACS1-213ENST00000533756 OAS2P29728 719 aaKnown RBP9.25□□□□□ -0.93
PACS1-213ENST00000533756 CD70P32970 193 aa9.25□□□□□ -0.93
PACS1-213ENST00000533756 COPB1P53618 953 aaKnown RBP9.25□□□□□ -0.93
PACS1-213ENST00000533756 ELAVL3Q14576 367 aaKnown RBP9.25□□□□□ -0.93
PACS1-213ENST00000533756 KMT5BQ4FZB7 885 aa9.25□□□□□ -0.93
PACS1-213ENST00000533756 MPP7Q5T2T1 576 aa9.25□□□□□ -0.93
PACS1-213ENST00000533756 RUFY3Q7L099 469 aa9.25□□□□□ -0.93
PACS1-213ENST00000533756 CACNA2D3Q8IZS8 1091 aa9.25□□□□□ -0.93
PACS1-213ENST00000533756 STK40Q8N2I9 435 aa9.25□□□□□ -0.93
PACS1-213ENST00000533756 C4orf32Q8N8J7 132 aa9.25□□□□□ -0.93
PACS1-213ENST00000533756 TAAR9Q96RI9 348 aa9.25□□□□□ -0.93
PACS1-213ENST00000533756 CGRRF1Q99675 332 aa9.25□□□□□ -0.93
PACS1-213ENST00000533756 MYOCQ99972 504 aa9.25□□□□□ -0.93
PACS1-213ENST00000533756 REPIN1Q9BWE0 567 aaKnown RBP9.25□□□□□ -0.93
PACS1-213ENST00000533756 CPEB1Q9BZB8 566 aaKnown RBP9.25□□□□□ -0.93
PACS1-213ENST00000533756 IRX2Q9BZI1 471 aaPredicted RBP9.25□□□□□ -0.93
PACS1-213ENST00000533756 INTS2Q9H0H0 1204 aaKnown RBP9.25□□□□□ -0.93
PACS1-213ENST00000533756 LRRN3Q9H3W5 708 aa9.25□□□□□ -0.93
PACS1-213ENST00000533756 ST6GALNAC4Q9H4F1 302 aa9.25□□□□□ -0.93
PACS1-213ENST00000533756 AKAP7Q9P0M2 348 aaPredicted RBP9.25□□□□□ -0.93
PACS1-213ENST00000533756 SPASTQ9UBP0 616 aa9.25□□□□□ -0.93
PACS1-213ENST00000533756 RASAL2Q9UJF2 1139 aa9.25□□□□□ -0.93
PACS1-213ENST00000533756 STOML2Q9UJZ1 356 aa9.25□□□□□ -0.93
PACS1-213ENST00000533756 NAGPAQ9UK23 515 aa9.25□□□□□ -0.93
PACS1-213ENST00000533756 PCDHA5Q9Y5H7 936 aa9.25□□□□□ -0.93
PACS1-213ENST00000533756 KCNMB2Q9Y691 235 aa9.25□□□□□ -0.93
PACS1-213ENST00000533756 TTC34A8MYJ7 566 aa9.24□□□□□ -0.93
PACS1-213ENST00000533756 LMO7DNF2Z398 122 aa9.24□□□□□ -0.93
PACS1-213ENST00000533756 BEST1O76090 585 aa9.24□□□□□ -0.93
PACS1-213ENST00000533756 FAM13AO94988 1023 aa9.24□□□□□ -0.93
PACS1-213ENST00000533756 PLA2G4BP0C869 781 aa9.24□□□□□ -0.93
PACS1-213ENST00000533756 PRLRP16471 622 aa9.24□□□□□ -0.93
PACS1-213ENST00000533756 JUNDP17535 347 aa9.24□□□□□ -0.93
PACS1-213ENST00000533756 EFEMP1Q12805 493 aa9.24□□□□□ -0.93
PACS1-213ENST00000533756 INPP5JQ15735 1006 aaPredicted RBP9.24□□□□□ -0.93
PACS1-213ENST00000533756 DUOXA2Q1HG44 320 aa9.24□□□□□ -0.93
PACS1-213ENST00000533756 HYIQ5T013 277 aa9.24□□□□□ -0.93
PACS1-213ENST00000533756 AGBL4Q5VU57 503 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms