RNA–Protein interactions for RNA: ENST00000533727.5

AMBRA1-211, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 1 (best) BASIC

Gene AMBRA1, Length 4,817 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-211ENST00000533727 KCNT2Q6UVM3 1135 aa11.47□□□□□ -0.57
AMBRA1-211ENST00000533727 EME1Q96AY2 570 aa11.47□□□□□ -0.57
AMBRA1-211ENST00000533727 PLD4Q96BZ4 506 aa11.47□□□□□ -0.57
AMBRA1-211ENST00000533727 SCLYQ96I15 445 aa11.47□□□□□ -0.57
AMBRA1-211ENST00000533727 CCT7Q99832 543 aa11.47□□□□□ -0.57
AMBRA1-211ENST00000533727 SH3GL2Q99962 352 aa11.47□□□□□ -0.57
AMBRA1-211ENST00000533727 MLPHQ9BV36 600 aaPredicted RBP11.47□□□□□ -0.57
AMBRA1-211ENST00000533727 NPHS2Q9NP85 383 aa11.47□□□□□ -0.57
AMBRA1-211ENST00000533727 APPL1Q9UKG1 709 aa11.47□□□□□ -0.57
AMBRA1-211ENST00000533727 XRCC4Q13426 336 aa11.47□□□□□ -0.57
AMBRA1-211ENST00000533727 MAMDC4Q6UXC1 1216 aa11.47□□□□□ -0.57
AMBRA1-211ENST00000533727 SLC22A9Q8IVM8 553 aa11.47□□□□□ -0.57
AMBRA1-211ENST00000533727 MAB21L3Q8N8X9 362 aa11.47□□□□□ -0.57
AMBRA1-211ENST00000533727 SERPINB12Q96P63 405 aa11.47□□□□□ -0.57
AMBRA1-211ENST00000533727 THTPAQ9BU02 230 aa11.47□□□□□ -0.57
AMBRA1-211ENST00000533727 POLMQ9NP87 494 aaPredicted RBP11.47□□□□□ -0.57
AMBRA1-211ENST00000533727 TAS2R13Q9NYV9 303 aa11.47□□□□□ -0.57
AMBRA1-211ENST00000533727 RCOR3Q9P2K3 495 aaPredicted RBP11.47□□□□□ -0.57
AMBRA1-211ENST00000533727 CTNNAL1Q9UBT7 734 aa11.47□□□□□ -0.57
AMBRA1-211ENST00000533727 ACOT9Q9Y305 439 aa11.47□□□□□ -0.57
AMBRA1-211ENST00000533727 A0A0U1RQF3 1178 aa11.47□□□□□ -0.57
AMBRA1-211ENST00000533727 C16orf96A6NNT2 1141 aa11.47□□□□□ -0.57
AMBRA1-211ENST00000533727 DDX3XO00571 662 aaKnown RBP eCLIP11.47□□□□□ -0.573e-7■■■■□ 19.9
AMBRA1-211ENST00000533727 CCL16O15467 120 aa11.47□□□□□ -0.57
AMBRA1-211ENST00000533727 SEC24DO94855 1032 aaPredicted RBP11.47□□□□□ -0.57
AMBRA1-211ENST00000533727 NQO1P15559 274 aaKnown RBP11.47□□□□□ -0.57
AMBRA1-211ENST00000533727 SCTRP47872 440 aa11.47□□□□□ -0.57
AMBRA1-211ENST00000533727 DLG4P78352 724 aa11.47□□□□□ -0.57
AMBRA1-211ENST00000533727 SMAD1Q15797 465 aaKnown RBP11.47□□□□□ -0.57
AMBRA1-211ENST00000533727 FAXCQ5TGI0 409 aa11.47□□□□□ -0.57
AMBRA1-211ENST00000533727 NIPSNAP3AQ9UFN0 247 aaPredicted RBP11.47□□□□□ -0.57
AMBRA1-211ENST00000533727 CACNB4O00305 520 aaPredicted RBP11.47□□□□□ -0.57
AMBRA1-211ENST00000533727 TGFB1I1O43294 461 aa11.47□□□□□ -0.57
AMBRA1-211ENST00000533727 CATP04040 527 aaKnown RBP11.47□□□□□ -0.57
AMBRA1-211ENST00000533727 SLC2A4P14672 509 aa11.47□□□□□ -0.57
AMBRA1-211ENST00000533727 ELP6Q0PNE2 266 aa11.47□□□□□ -0.57
AMBRA1-211ENST00000533727 MTSS1LQ765P7 747 aa11.47□□□□□ -0.57
AMBRA1-211ENST00000533727 OTOAQ7RTW8 1153 aa11.47□□□□□ -0.57
AMBRA1-211ENST00000533727 ADCK1Q86TW2 530 aa11.47□□□□□ -0.57
AMBRA1-211ENST00000533727 DDHD1Q8NEL9 900 aa11.47□□□□□ -0.57
AMBRA1-211ENST00000533727 TNIP2Q8NFZ5 429 aa11.47□□□□□ -0.57
AMBRA1-211ENST00000533727 TIFAQ96CG3 184 aa11.47□□□□□ -0.57
AMBRA1-211ENST00000533727 FAM118BQ9BPY3 351 aa11.47□□□□□ -0.57
AMBRA1-211ENST00000533727 B2RBV5 119 aa11.46□□□□□ -0.57
AMBRA1-211ENST00000533727 RAD51BO15315 384 aa11.46□□□□□ -0.57
AMBRA1-211ENST00000533727 PGAM1P18669 254 aa11.46□□□□□ -0.57
AMBRA1-211ENST00000533727 ATP4AP20648 1035 aa11.46□□□□□ -0.57
AMBRA1-211ENST00000533727 SERPINH1P50454 418 aaKnown RBP11.46□□□□□ -0.57
AMBRA1-211ENST00000533727 YBEYP58557 167 aaPredicted RBP11.46□□□□□ -0.57
AMBRA1-211ENST00000533727 ARSHQ5FYA8 562 aa11.46□□□□□ -0.57
AMBRA1-211ENST00000533727 RD3Q7Z3Z2 195 aa11.46□□□□□ -0.57
AMBRA1-211ENST00000533727 NAF1Q96HR8 494 aaKnown RBP11.46□□□□□ -0.57
AMBRA1-211ENST00000533727 IARS2Q9NSE4 1012 aaKnown RBP11.46□□□□□ -0.57
AMBRA1-211ENST00000533727 SPASTQ9UBP0 616 aa11.46□□□□□ -0.57
AMBRA1-211ENST00000533727 TRIM10Q9UDY6 481 aa11.46□□□□□ -0.57
AMBRA1-211ENST00000533727 CDYLQ9Y232 598 aa11.46□□□□□ -0.57
AMBRA1-211ENST00000533727 TMEM120BA0PK00 339 aa11.46□□□□□ -0.57
AMBRA1-211ENST00000533727 CILPO75339 1184 aa11.46□□□□□ -0.57
AMBRA1-211ENST00000533727 CYP1A2P05177 515 aa11.46□□□□□ -0.57
AMBRA1-211ENST00000533727 ALDH18A1P54886 795 aaKnown RBP11.46□□□□□ -0.57
AMBRA1-211ENST00000533727 BTKQ06187 659 aa11.46□□□□□ -0.57
AMBRA1-211ENST00000533727 GRSF1Q12849 480 aaKnown RBP eCLIP11.46□□□□□ -0.57
AMBRA1-211ENST00000533727 CNTN1Q12860 1018 aa11.46□□□□□ -0.57
AMBRA1-211ENST00000533727 KYNUQ16719 465 aa11.46□□□□□ -0.57
AMBRA1-211ENST00000533727 KLHL35Q6PF15 583 aa11.46□□□□□ -0.57
AMBRA1-211ENST00000533727 PSTKQ8IV42 348 aaKnown RBP11.46□□□□□ -0.57
AMBRA1-211ENST00000533727 STK32AQ8WU08 396 aa11.46□□□□□ -0.57
AMBRA1-211ENST00000533727 PNKPQ96T60 521 aa11.46□□□□□ -0.57
AMBRA1-211ENST00000533727 RBBP8Q99708 897 aa11.46□□□□□ -0.57
AMBRA1-211ENST00000533727 HNRNPABQ99729 332 aaKnown RBP11.46□□□□□ -0.57
AMBRA1-211ENST00000533727 TMCO1Q9UM00 188 aa11.46□□□□□ -0.57
AMBRA1-211ENST00000533727 SNED1Q8TER0 1413 aa11.46□□□□□ -0.57
AMBRA1-211ENST00000533727 SCN11AQ9UI33 1791 aa11.46□□□□□ -0.58
AMBRA1-211ENST00000533727 BAZ2BQ9UIF8 2168 aaKnown RBP11.46□□□□□ -0.58
AMBRA1-211ENST00000533727 EVPLLA8MZ36 301 aa11.46□□□□□ -0.58
AMBRA1-211ENST00000533727 PJA2O43164 708 aa11.46□□□□□ -0.58
AMBRA1-211ENST00000533727 IL1BP01584 269 aa11.46□□□□□ -0.58
AMBRA1-211ENST00000533727 TPBGLP0DKB5 382 aa11.46□□□□□ -0.58
AMBRA1-211ENST00000533727 KDELR1P24390 212 aa11.46□□□□□ -0.58
AMBRA1-211ENST00000533727 PTPN7P35236 360 aa11.46□□□□□ -0.58
AMBRA1-211ENST00000533727 PRKAA2P54646 552 aa11.46□□□□□ -0.58
AMBRA1-211ENST00000533727 CSE1LP55060 971 aaKnown RBP11.46□□□□□ -0.58
AMBRA1-211ENST00000533727 TRIM16LQ309B1 348 aa11.46□□□□□ -0.58
AMBRA1-211ENST00000533727 SLC25A52Q3SY17 297 aa11.46□□□□□ -0.58
AMBRA1-211ENST00000533727 MFSD4BQ5TF39 518 aa11.46□□□□□ -0.58
AMBRA1-211ENST00000533727 ANKRD27Q96NW4 1050 aa11.46□□□□□ -0.58
AMBRA1-211ENST00000533727 MRPL45Q9BRJ2 306 aaKnown RBP11.46□□□□□ -0.58
AMBRA1-211ENST00000533727 SLC39A8Q9C0K1 460 aa11.46□□□□□ -0.58
AMBRA1-211ENST00000533727 OSGEPQ9NPF4 335 aa11.46□□□□□ -0.58
AMBRA1-211ENST00000533727 SLC24A2Q9UI40 661 aa11.46□□□□□ -0.58
AMBRA1-211ENST00000533727 ERVW-1Q9UQF0 538 aa11.46□□□□□ -0.58
AMBRA1-211ENST00000533727 SIK3Q9Y2K2 1263 aa11.46□□□□□ -0.58
AMBRA1-211ENST00000533727 TRIM49D1C9J1S8 452 aa11.46□□□□□ -0.58
AMBRA1-211ENST00000533727 PIGRP01833 764 aa11.46□□□□□ -0.58
AMBRA1-211ENST00000533727 PRNPP04156 253 aa11.46□□□□□ -0.58
AMBRA1-211ENST00000533727 ASLP04424 464 aa11.46□□□□□ -0.58
AMBRA1-211ENST00000533727 NAA20P61599 178 aa11.46□□□□□ -0.58
AMBRA1-211ENST00000533727 TEAD4Q15561 434 aa11.46□□□□□ -0.58
AMBRA1-211ENST00000533727 KBTBD12Q3ZCT8 623 aa11.46□□□□□ -0.58
AMBRA1-211ENST00000533727 PARP15Q460N3 678 aa11.46□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms