RNA–Protein interactions for RNA: ENST00000533492.1

CPSF1-211, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 510 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-211ENST00000533492 CNTN5O94779 1100 aa15.87■□□□□ 0.13
CPSF1-211ENST00000533492 TOP3BO95985 862 aaKnown RBP15.87■□□□□ 0.13
CPSF1-211ENST00000533492 RHOCP08134 193 aa15.87■□□□□ 0.13
CPSF1-211ENST00000533492 ZNF883P0CG24 379 aa15.87■□□□□ 0.13
CPSF1-211ENST00000533492 VAV1P15498 845 aa15.87■□□□□ 0.13
CPSF1-211ENST00000533492 GOT1P17174 413 aa15.87■□□□□ 0.13
CPSF1-211ENST00000533492 SPINK2P20155 84 aa15.87■□□□□ 0.13
CPSF1-211ENST00000533492 FLT3P36888 993 aa15.87■□□□□ 0.13
CPSF1-211ENST00000533492 STAT1P42224 750 aa15.87■□□□□ 0.13
CPSF1-211ENST00000533492 GRIA4P48058 902 aa15.87■□□□□ 0.13
CPSF1-211ENST00000533492 COPB1P53618 953 aaKnown RBP15.87■□□□□ 0.13
CPSF1-211ENST00000533492 FAM193AP78312 1265 aa15.87■□□□□ 0.13
CPSF1-211ENST00000533492 KRT83P78385 493 aa15.87■□□□□ 0.13
CPSF1-211ENST00000533492 CDR2Q01850 454 aa15.87■□□□□ 0.13
CPSF1-211ENST00000533492 BNC1Q01954 994 aa15.87■□□□□ 0.13
CPSF1-211ENST00000533492 SUZ12Q15022 739 aaKnown RBP15.87■□□□□ 0.13
CPSF1-211ENST00000533492 DLG2Q15700 870 aa15.87■□□□□ 0.13
CPSF1-211ENST00000533492 STX1AQ16623 288 aa15.87■□□□□ 0.13
CPSF1-211ENST00000533492 KIF19Q2TAC6 998 aa15.87■□□□□ 0.13
CPSF1-211ENST00000533492 OR2T34Q8NGX1 318 aa15.87■□□□□ 0.13
CPSF1-211ENST00000533492 SLC20A1Q8WUM9 679 aa15.87■□□□□ 0.13
CPSF1-211ENST00000533492 ALG14Q96F25 216 aa15.87■□□□□ 0.13
CPSF1-211ENST00000533492 C1orf74Q96LT6 269 aa15.87■□□□□ 0.13
CPSF1-211ENST00000533492 SCNM1Q9BWG6 230 aa15.87■□□□□ 0.13
CPSF1-211ENST00000533492 ADAMTS1Q9UHI8 967 aa15.87■□□□□ 0.13
CPSF1-211ENST00000533492 ANKRD6Q9Y2G4 727 aa15.87■□□□□ 0.13
CPSF1-211ENST00000533492 TBC1D30Q9Y2I9 924 aa15.87■□□□□ 0.13
CPSF1-211ENST00000533492 SNX10Q9Y5X0 201 aa15.87■□□□□ 0.13
CPSF1-211ENST00000533492 SLCO1B1Q9Y6L6 691 aa15.87■□□□□ 0.13
CPSF1-211ENST00000533492 EPG5Q9HCE0 2579 aa15.86■□□□□ 0.13
CPSF1-211ENST00000533492 A0A1W2PPC4 97 aa15.86■□□□□ 0.13
CPSF1-211ENST00000533492 ATP9BO43861 1147 aa15.86■□□□□ 0.13
CPSF1-211ENST00000533492 BNIP3LO60238 219 aa15.86■□□□□ 0.13
CPSF1-211ENST00000533492 SRGAP2O75044 1071 aa15.86■□□□□ 0.13
CPSF1-211ENST00000533492 TRIM16O95361 564 aa15.86■□□□□ 0.13
CPSF1-211ENST00000533492 IGHV4-34P06331 123 aa15.86■□□□□ 0.13
CPSF1-211ENST00000533492 VASPP50552 380 aaPredicted RBP15.86■□□□□ 0.13
CPSF1-211ENST00000533492 C21orf59P57076 290 aa15.86■□□□□ 0.13
CPSF1-211ENST00000533492 RACK1P63244 317 aaKnown RBP15.86■□□□□ 0.13
CPSF1-211ENST00000533492 MYL5Q02045 173 aa15.86■□□□□ 0.13
CPSF1-211ENST00000533492 UBXN1Q04323 297 aa15.86■□□□□ 0.13
CPSF1-211ENST00000533492 SYCP1Q15431 976 aa15.86■□□□□ 0.13
CPSF1-211ENST00000533492 ALFQ53S48 1182 aa15.86■□□□□ 0.13
CPSF1-211ENST00000533492 FAM46CQ5VWP2 391 aa15.86■□□□□ 0.13
CPSF1-211ENST00000533492 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP15.86■□□□□ 0.13
CPSF1-211ENST00000533492 AADATQ8N5Z0 425 aa15.86■□□□□ 0.13
CPSF1-211ENST00000533492 NEK11Q8NG66 645 aa15.86■□□□□ 0.13
CPSF1-211ENST00000533492 OR52K2Q8NGK3 314 aa15.86■□□□□ 0.13
CPSF1-211ENST00000533492 FRS2Q8WU20 508 aa15.86■□□□□ 0.13
CPSF1-211ENST00000533492 SKA1Q96BD8 255 aa15.86■□□□□ 0.13
CPSF1-211ENST00000533492 CFAP57Q96MR6 1250 aa15.86■□□□□ 0.13
CPSF1-211ENST00000533492 C2orf49Q9BVC5 232 aaPredicted RBP15.86■□□□□ 0.13
CPSF1-211ENST00000533492 ANLNQ9NQW6 1124 aa15.86■□□□□ 0.13
CPSF1-211ENST00000533492 TMEM59LQ9UK28 342 aa15.86■□□□□ 0.13
CPSF1-211ENST00000533492 NOCTQ9UK39 431 aaKnown RBP15.86■□□□□ 0.13
CPSF1-211ENST00000533492 FNDC3AQ9Y2H6 1198 aaKnown RBP15.86■□□□□ 0.13
CPSF1-211ENST00000533492 FARP1Q9Y4F1 1045 aaPredicted RBP15.86■□□□□ 0.13
CPSF1-211ENST00000533492 OR51B4Q9Y5P0 310 aa15.86■□□□□ 0.13
CPSF1-211ENST00000533492 SNX11Q9Y5W9 270 aa15.86■□□□□ 0.13
CPSF1-211ENST00000533492 CACNA1BQ00975 2339 aa15.86■□□□□ 0.13
CPSF1-211ENST00000533492 MAP1BP46821 2468 aaKnown RBP15.86■□□□□ 0.13
CPSF1-211ENST00000533492 TBC1D3DA0A087WVF3 549 aa15.85■□□□□ 0.13
CPSF1-211ENST00000533492 TBC1D3IA0A087WXS9 549 aa15.85■□□□□ 0.13
CPSF1-211ENST00000533492 TBC1D3EA0A087X179 549 aa15.85■□□□□ 0.13
CPSF1-211ENST00000533492 TBC1D3KA0A087X1G2 549 aa15.85■□□□□ 0.13
CPSF1-211ENST00000533492 TBC1D3FA6NER0 549 aaPredicted RBP15.85■□□□□ 0.13
CPSF1-211ENST00000533492 DRGXA6NNA5 263 aa15.85■□□□□ 0.13
CPSF1-211ENST00000533492 TBC1D3LB9A6J9 549 aa15.85■□□□□ 0.13
CPSF1-211ENST00000533492 E9PAM4 449 aa15.85■□□□□ 0.13
CPSF1-211ENST00000533492 C1QTNF3-AMACRE9PGA6 284 aa15.85■□□□□ 0.13
CPSF1-211ENST00000533492 HYAL3O43820 417 aaPredicted RBP15.85■□□□□ 0.13
CPSF1-211ENST00000533492 MBD3O95983 291 aa15.85■□□□□ 0.13
CPSF1-211ENST00000533492 CYP1A1P04798 512 aaPredicted RBP15.85■□□□□ 0.13
CPSF1-211ENST00000533492 TBC1D3HP0C7X1 549 aa15.85■□□□□ 0.13
CPSF1-211ENST00000533492 OR1E1P30953 314 aa15.85■□□□□ 0.13
CPSF1-211ENST00000533492 JAM2P57087 298 aa15.85■□□□□ 0.13
CPSF1-211ENST00000533492 ATP11AP98196 1134 aa15.85■□□□□ 0.13
CPSF1-211ENST00000533492 FMO1Q01740 532 aa15.85■□□□□ 0.13
CPSF1-211ENST00000533492 ZNF423Q2M1K9 1284 aa15.85■□□□□ 0.13
CPSF1-211ENST00000533492 C6orf118Q5T5N4 469 aa15.85■□□□□ 0.13
CPSF1-211ENST00000533492 TBC1D3GQ6DHY5 549 aa15.85■□□□□ 0.13
CPSF1-211ENST00000533492 TBC1D3CQ6IPX1 549 aa15.85■□□□□ 0.13
CPSF1-211ENST00000533492 TRIM72Q6ZMU5 477 aa15.85■□□□□ 0.13
CPSF1-211ENST00000533492 ARCQ7LC44 396 aa15.85■□□□□ 0.13
CPSF1-211ENST00000533492 PHLDB2Q86SQ0 1253 aa15.85■□□□□ 0.13
CPSF1-211ENST00000533492 SETD3Q86TU7 594 aaPredicted RBP15.85■□□□□ 0.13
CPSF1-211ENST00000533492 FAM131BQ86XD5 332 aa15.85■□□□□ 0.13
CPSF1-211ENST00000533492 TBC1D3Q8IZP1 549 aaPredicted RBP15.85■□□□□ 0.13
CPSF1-211ENST00000533492 SH2D3CQ8N5H7 860 aa15.85■□□□□ 0.13
CPSF1-211ENST00000533492 ATP11CQ8NB49 1132 aa15.85■□□□□ 0.13
CPSF1-211ENST00000533492 HAPLN3Q96S86 360 aa15.85■□□□□ 0.13
CPSF1-211ENST00000533492 ACE2Q9BYF1 805 aaPredicted RBP15.85■□□□□ 0.13
CPSF1-211ENST00000533492 METTL5Q9NRN9 209 aaKnown RBP15.85■□□□□ 0.13
CPSF1-211ENST00000533492 TMPRSS4Q9NRS4 437 aa15.85■□□□□ 0.13
CPSF1-211ENST00000533492 MPP6Q9NZW5 540 aa15.85■□□□□ 0.13
CPSF1-211ENST00000533492 LIMA1Q9UHB6 759 aaKnown RBP15.85■□□□□ 0.13
CPSF1-211ENST00000533492 WASF3Q9UPY6 502 aa15.85■□□□□ 0.13
CPSF1-211ENST00000533492 SIK3Q9Y2K2 1263 aa15.85■□□□□ 0.13
CPSF1-211ENST00000533492 PCDHGB2Q9Y5G2 931 aa15.85■□□□□ 0.13
CPSF1-211ENST00000533492 LGALS16A8MUM7 142 aa15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms