RNA–Protein interactions for RNA: ENST00000533069.1

PKP3-209, Transcript of plakophilin 3, humanhuman

TSL 2

Gene PKP3, Length 590 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-209ENST00000533069 ELAVL3Q14576 367 aaKnown RBP17.11■□□□□ 0.33
PKP3-209ENST00000533069 CCDC14Q49A88 953 aa17.11■□□□□ 0.33
PKP3-209ENST00000533069 C6orf118Q5T5N4 469 aa17.11■□□□□ 0.33
PKP3-209ENST00000533069 C9orf64Q5T6V5 341 aa17.11■□□□□ 0.33
PKP3-209ENST00000533069 DAB2IPQ5VWQ8 1189 aa17.11■□□□□ 0.33
PKP3-209ENST00000533069 DNAJC24Q6P3W2 148 aa17.11■□□□□ 0.33
PKP3-209ENST00000533069 USP30Q70CQ3 517 aa17.11■□□□□ 0.33
PKP3-209ENST00000533069 IRF2BP2Q7Z5L9 587 aa17.11■□□□□ 0.33
PKP3-209ENST00000533069 RGL4Q8IZJ4 473 aa17.11■□□□□ 0.33
PKP3-209ENST00000533069 JOSD2Q8TAC2 188 aa17.11■□□□□ 0.33
PKP3-209ENST00000533069 DNASE2BQ8WZ79 361 aa17.11■□□□□ 0.33
PKP3-209ENST00000533069 ALG14Q96F25 216 aa17.11■□□□□ 0.33
PKP3-209ENST00000533069 RPL10LQ96L21 214 aaKnown RBP17.11■□□□□ 0.33
PKP3-209ENST00000533069 MUC3BQ9H195 1237 aa17.11■□□□□ 0.33
PKP3-209ENST00000533069 PABPC3Q9H361 631 aaKnown RBP17.11■□□□□ 0.33
PKP3-209ENST00000533069 MTG2Q9H4K7 406 aa17.11■□□□□ 0.33
PKP3-209ENST00000533069 SLCO3A1Q9UIG8 710 aa17.11■□□□□ 0.33
PKP3-209ENST00000533069 NCKAP1Q9Y2A7 1128 aa17.11■□□□□ 0.33
PKP3-209ENST00000533069 OR51B4Q9Y5P0 310 aa17.11■□□□□ 0.33
PKP3-209ENST00000533069 SIGLEC16A6NMB1 481 aa17.1■□□□□ 0.33
PKP3-209ENST00000533069 METTL12A8MUP2 240 aa17.1■□□□□ 0.33
PKP3-209ENST00000533069 AKR1B15C9JRZ8 316 aaPredicted RBP17.1■□□□□ 0.33
PKP3-209ENST00000533069 TM4SF5O14894 197 aa17.1■□□□□ 0.33
PKP3-209ENST00000533069 CNTN5O94779 1100 aa17.1■□□□□ 0.33
PKP3-209ENST00000533069 STK19P49842 368 aaPredicted RBP17.1■□□□□ 0.33
PKP3-209ENST00000533069 KRT83P78385 493 aa17.1■□□□□ 0.33
PKP3-209ENST00000533069 NRG1Q02297 640 aaPredicted RBP17.1■□□□□ 0.33
PKP3-209ENST00000533069 GFPT1Q06210 699 aaPredicted RBP17.1■□□□□ 0.33
PKP3-209ENST00000533069 ASIC2Q16515 512 aa17.1■□□□□ 0.33
PKP3-209ENST00000533069 CDO1Q16878 200 aa17.1■□□□□ 0.33
PKP3-209ENST00000533069 C15orf59Q2T9L4 293 aaPredicted RBP17.1■□□□□ 0.33
PKP3-209ENST00000533069 ALFQ53S48 1182 aa17.1■□□□□ 0.33
PKP3-209ENST00000533069 ZNF783Q6ZMS7 281 aa17.1■□□□□ 0.33
PKP3-209ENST00000533069 PHLDB2Q86SQ0 1253 aa17.1■□□□□ 0.33
PKP3-209ENST00000533069 FAM124AQ86V42 546 aa17.1■□□□□ 0.33
PKP3-209ENST00000533069 OR52K2Q8NGK3 314 aa17.1■□□□□ 0.33
PKP3-209ENST00000533069 CENPIQ92674 756 aaPredicted RBP17.1■□□□□ 0.33
PKP3-209ENST00000533069 SYN2Q92777 582 aaPredicted RBP17.1■□□□□ 0.33
PKP3-209ENST00000533069 SYT11Q9BT88 431 aa17.1■□□□□ 0.33
PKP3-209ENST00000533069 C2orf49Q9BVC5 232 aaPredicted RBP17.1■□□□□ 0.33
PKP3-209ENST00000533069 ZYG11BQ9C0D3 744 aa17.1■□□□□ 0.33
PKP3-209ENST00000533069 TTYH3Q9C0H2 523 aa17.1■□□□□ 0.33
PKP3-209ENST00000533069 BTBD1Q9H0C5 482 aa17.1■□□□□ 0.33
PKP3-209ENST00000533069 RETREG1Q9H6L5 497 aa17.1■□□□□ 0.33
PKP3-209ENST00000533069 SGK2Q9HBY8 427 aa17.1■□□□□ 0.33
PKP3-209ENST00000533069 CAPN10Q9HC96 672 aa17.1■□□□□ 0.33
PKP3-209ENST00000533069 PPARGC1AQ9UBK2 798 aaKnown RBP17.1■□□□□ 0.33
PKP3-209ENST00000533069 C4orf47A7E2U8 309 aa17.09■□□□□ 0.33
PKP3-209ENST00000533069 ATP9BO43861 1147 aa17.09■□□□□ 0.33
PKP3-209ENST00000533069 SRGAP2O75044 1071 aa17.09■□□□□ 0.33
PKP3-209ENST00000533069 GYPCP04921 128 aa17.09■□□□□ 0.33
PKP3-209ENST00000533069 DESP17661 470 aa17.09■□□□□ 0.33
PKP3-209ENST00000533069 ENGP17813 658 aa17.09■□□□□ 0.33
PKP3-209ENST00000533069 TNFAIP3P21580 790 aa17.09■□□□□ 0.33
PKP3-209ENST00000533069 GPD1P21695 349 aa17.09■□□□□ 0.33
PKP3-209ENST00000533069 RFC1P35251 1148 aaPredicted RBP17.09■□□□□ 0.33
PKP3-209ENST00000533069 ADRA1BP35368 520 aa17.09■□□□□ 0.33
PKP3-209ENST00000533069 PRKCIP41743 596 aa17.09■□□□□ 0.33
PKP3-209ENST00000533069 ATXN3P54252 364 aaPredicted RBP17.09■□□□□ 0.33
PKP3-209ENST00000533069 CST6Q15828 149 aa17.09■□□□□ 0.33
PKP3-209ENST00000533069 HS1BP3Q53T59 392 aa17.09■□□□□ 0.33
PKP3-209ENST00000533069 DCAF12L1Q5VU92 463 aa17.09■□□□□ 0.33
PKP3-209ENST00000533069 SFMBT2Q5VUG0 894 aa17.09■□□□□ 0.33
PKP3-209ENST00000533069 ACAD10Q6JQN1 1059 aa17.09■□□□□ 0.33
PKP3-209ENST00000533069 DSG4Q86SJ6 1040 aa17.09■□□□□ 0.33
PKP3-209ENST00000533069 DCAF4L2Q8NA75 395 aa17.09■□□□□ 0.33
PKP3-209ENST00000533069 SPC24Q8NBT2 197 aa17.09■□□□□ 0.33
PKP3-209ENST00000533069 CCDC112Q8NEF3 446 aa17.09■□□□□ 0.33
PKP3-209ENST00000533069 FAM172AQ8WUF8 416 aa17.09■□□□□ 0.33
PKP3-209ENST00000533069 PTPRN2Q92932 1015 aa17.09■□□□□ 0.33
PKP3-209ENST00000533069 VCPIP1Q96JH7 1222 aa17.09■□□□□ 0.33
PKP3-209ENST00000533069 PANX2Q96RD6 677 aa17.09■□□□□ 0.33
PKP3-209ENST00000533069 TMPRSS4Q9NRS4 437 aa17.09■□□□□ 0.33
PKP3-209ENST00000533069 ZNHIT6Q9NWK9 470 aaKnown RBP17.09■□□□□ 0.33
PKP3-209ENST00000533069 AIPL1Q9NZN9 384 aa17.09■□□□□ 0.33
PKP3-209ENST00000533069 SNX10Q9Y5X0 201 aa17.09■□□□□ 0.33
PKP3-209ENST00000533069 ABCA7Q8IZY2 2146 aa17.08■□□□□ 0.33
PKP3-209ENST00000533069 THADAQ6YHU6 1953 aa17.08■□□□□ 0.33
PKP3-209ENST00000533069 A0A1B0GTW7 788 aa17.08■□□□□ 0.32
PKP3-209ENST00000533069 TCRBV5S1A1TA0A578 114 aa17.08■□□□□ 0.32
PKP3-209ENST00000533069 MED19A0JLT2 244 aaPredicted RBP17.08■□□□□ 0.32
PKP3-209ENST00000533069 CDX4O14627 284 aaPredicted RBP17.08■□□□□ 0.32
PKP3-209ENST00000533069 MFAP3LO75121 409 aa17.08■□□□□ 0.32
PKP3-209ENST00000533069 GJB6O95452 261 aa17.08■□□□□ 0.32
PKP3-209ENST00000533069 SEMA4FO95754 770 aa17.08■□□□□ 0.32
PKP3-209ENST00000533069 ADH1BP00325 375 aa17.08■□□□□ 0.32
PKP3-209ENST00000533069 SYPP08247 313 aa17.08■□□□□ 0.32
PKP3-209ENST00000533069 OR1E1P30953 314 aa17.08■□□□□ 0.32
PKP3-209ENST00000533069 ACSL1P33121 698 aa17.08■□□□□ 0.32
PKP3-209ENST00000533069 ZNF143P52747 638 aaPredicted RBP17.08■□□□□ 0.32
PKP3-209ENST00000533069 PPM1JQ5JR12 505 aa17.08■□□□□ 0.32
PKP3-209ENST00000533069 SH3PXD2AQ5TCZ1 1133 aa17.08■□□□□ 0.32
PKP3-209ENST00000533069 WDR59Q6PJI9 974 aa17.08■□□□□ 0.32
PKP3-209ENST00000533069 TFAP2DQ7Z6R9 452 aa17.08■□□□□ 0.32
PKP3-209ENST00000533069 MMAAQ8IVH4 418 aaKnown RBP17.08■□□□□ 0.32
PKP3-209ENST00000533069 MCOLN2Q8IZK6 566 aa17.08■□□□□ 0.32
PKP3-209ENST00000533069 OR8K1Q8NGG5 319 aa17.08■□□□□ 0.32
PKP3-209ENST00000533069 GANCQ8TET4 914 aa17.08■□□□□ 0.32
PKP3-209ENST00000533069 FRS2Q8WU20 508 aa17.08■□□□□ 0.32
PKP3-209ENST00000533069 NTAN1Q96AB6 310 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms