RNA–Protein interactions for RNA: ENST00000532457.5

PACSIN3-209, Transcript of protein kinase C and casein kinase substrate in neurons 3, humanhuman

TSL 5

Gene PACSIN3, Length 1,845 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3-209ENST00000532457 PTCRAQ6ISU1 281 aaPredicted RBP22.5■■□□□ 1.19
PACSIN3-209ENST00000532457 HIBCHQ6NVY1 386 aaPredicted RBP22.5■■□□□ 1.19
PACSIN3-209ENST00000532457 BBS7Q8IWZ6 715 aa22.5■■□□□ 1.19
PACSIN3-209ENST00000532457 SH3RF2Q8TEC5 729 aa22.5■■□□□ 1.19
PACSIN3-209ENST00000532457 POMKQ9H5K3 350 aa22.5■■□□□ 1.19
PACSIN3-209ENST00000532457 TCRBV7S3A2A0A539 114 aa22.49■■□□□ 1.19
PACSIN3-209ENST00000532457 SOBPA7XYQ1 873 aa22.49■■□□□ 1.19
PACSIN3-209ENST00000532457 MAFKO60675 156 aa22.49■■□□□ 1.19
PACSIN3-209ENST00000532457 PRAMEF12O95522 483 aa22.49■■□□□ 1.19
PACSIN3-209ENST00000532457 METTL18O95568 372 aa22.49■■□□□ 1.19
PACSIN3-209ENST00000532457 MX2P20592 715 aa22.49■■□□□ 1.19
PACSIN3-209ENST00000532457 TFF2Q03403 129 aa22.49■■□□□ 1.19
PACSIN3-209ENST00000532457 SMAD2Q15796 467 aaKnown RBP22.49■■□□□ 1.19
PACSIN3-209ENST00000532457 RNASEH2BQ5TBB1 312 aaKnown RBP22.49■■□□□ 1.19
PACSIN3-209ENST00000532457 ANKRD22Q5VYY1 191 aa22.49■■□□□ 1.19
PACSIN3-209ENST00000532457 FAM217AQ8IXS0 508 aa22.49■■□□□ 1.19
PACSIN3-209ENST00000532457 CCHCR1Q8TD31 782 aa22.49■■□□□ 1.19
PACSIN3-209ENST00000532457 PRDM6Q9NQX0 595 aa22.49■■□□□ 1.19
PACSIN3-209ENST00000532457 SEPT10Q9P0V9 454 aa22.49■■□□□ 1.19
PACSIN3-209ENST00000532457 TPX2Q9ULW0 747 aaKnown RBP22.49■■□□□ 1.19
PACSIN3-209ENST00000532457 UNC80Q8N2C7 3258 aa22.49■■□□□ 1.19
PACSIN3-209ENST00000532457 NYNRINQ9P2P1 1898 aaKnown RBP22.49■■□□□ 1.19
PACSIN3-209ENST00000532457 RNF103O00237 685 aa22.48■■□□□ 1.19
PACSIN3-209ENST00000532457 LATS1O95835 1130 aa22.48■■□□□ 1.19
PACSIN3-209ENST00000532457 OR1E1P30953 314 aa22.48■■□□□ 1.19
PACSIN3-209ENST00000532457 AVPR1AP37288 418 aa22.48■■□□□ 1.19
PACSIN3-209ENST00000532457 NUMBP49757 651 aa22.48■■□□□ 1.19
PACSIN3-209ENST00000532457 GAD2Q05329 585 aa22.48■■□□□ 1.19
PACSIN3-209ENST00000532457 ANKRD20A2Q5SQ80 823 aa22.48■■□□□ 1.19
PACSIN3-209ENST00000532457 ANKRD20A1Q5TYW2 823 aa22.48■■□□□ 1.19
PACSIN3-209ENST00000532457 ANKRD20A3Q5VUR7 823 aa22.48■■□□□ 1.19
PACSIN3-209ENST00000532457 GET4Q7L5D6 327 aaPredicted RBP22.48■■□□□ 1.19
PACSIN3-209ENST00000532457 CPT1BQ92523 772 aa22.48■■□□□ 1.19
PACSIN3-209ENST00000532457 CAVIN3Q969G5 261 aa22.48■■□□□ 1.19
PACSIN3-209ENST00000532457 HMCESQ96FZ2 354 aa22.48■■□□□ 1.19
PACSIN3-209ENST00000532457 TSGA13Q96PP4 275 aa22.48■■□□□ 1.19
PACSIN3-209ENST00000532457 TDP1Q9NUW8 608 aa22.48■■□□□ 1.19
PACSIN3-209ENST00000532457 FARP1Q9Y4F1 1045 aaPredicted RBP22.48■■□□□ 1.19
PACSIN3-209ENST00000532457 PTPN3P26045 913 aa22.47■■□□□ 1.19
PACSIN3-209ENST00000532457 CHKAP35790 457 aa22.47■■□□□ 1.19
PACSIN3-209ENST00000532457 NDST2P52849 883 aa22.47■■□□□ 1.19
PACSIN3-209ENST00000532457 CALCOCO2Q13137 446 aa22.47■■□□□ 1.19
PACSIN3-209ENST00000532457 SYCP2LQ5T4T6 812 aa22.47■■□□□ 1.19
PACSIN3-209ENST00000532457 FAXCQ5TGI0 409 aa22.47■■□□□ 1.19
PACSIN3-209ENST00000532457 ZNF567Q8N184 647 aa22.47■■□□□ 1.19
PACSIN3-209ENST00000532457 ZNF419Q96HQ0 510 aaPredicted RBP22.47■■□□□ 1.19
PACSIN3-209ENST00000532457 BRD8Q9H0E9 1235 aa22.47■■□□□ 1.19
PACSIN3-209ENST00000532457 GDE1Q9NZC3 331 aa22.47■■□□□ 1.19
PACSIN3-209ENST00000532457 SH3BP1Q9Y3L3 701 aa22.47■■□□□ 1.19
PACSIN3-209ENST00000532457 SHROOM3Q8TF72 1996 aa22.47■■□□□ 1.19
PACSIN3-209ENST00000532457 RASA4BC9J798 803 aa22.47■■□□□ 1.19
PACSIN3-209ENST00000532457 RASA4O43374 803 aa22.47■■□□□ 1.19
PACSIN3-209ENST00000532457 ACVRL1P37023 503 aa22.47■■□□□ 1.19
PACSIN3-209ENST00000532457 ZBTB17Q13105 803 aa22.47■■□□□ 1.19
PACSIN3-209ENST00000532457 EMBQ6PCB8 327 aa22.47■■□□□ 1.19
PACSIN3-209ENST00000532457 OTOP3Q7RTS5 596 aa22.47■■□□□ 1.19
PACSIN3-209ENST00000532457 ARID3BQ8IVW6 561 aaPredicted RBP22.47■■□□□ 1.19
PACSIN3-209ENST00000532457 CCDC13Q8IYE1 715 aa22.47■■□□□ 1.19
PACSIN3-209ENST00000532457 ATXN2LQ8WWM7 1075 aaKnown RBP22.47■■□□□ 1.19
PACSIN3-209ENST00000532457 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP22.47■■□□□ 1.19
PACSIN3-209ENST00000532457 LRRC45Q96CN5 670 aa22.47■■□□□ 1.19
PACSIN3-209ENST00000532457 LRRC3BQ96PB8 259 aa22.47■■□□□ 1.19
PACSIN3-209ENST00000532457 PHF7Q9BWX1 381 aaPredicted RBP22.47■■□□□ 1.19
PACSIN3-209ENST00000532457 FUT8Q9BYC5 575 aa22.47■■□□□ 1.19
PACSIN3-209ENST00000532457 ETNK1Q9HBU6 452 aa22.47■■□□□ 1.19
PACSIN3-209ENST00000532457 PAK5Q9P286 719 aa22.47■■□□□ 1.19
PACSIN3-209ENST00000532457 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP22.46■■□□□ 1.19
PACSIN3-209ENST00000532457 A0A0A0MRY4 1105 aa22.46■■□□□ 1.19
PACSIN3-209ENST00000532457 A0A0D9SEW6 157 aa22.46■■□□□ 1.19
PACSIN3-209ENST00000532457 CCNCP24863 283 aa22.46■■□□□ 1.19
PACSIN3-209ENST00000532457 CDH4P55283 916 aa22.46■■□□□ 1.19
PACSIN3-209ENST00000532457 MAP9Q49MG5 647 aa22.46■■□□□ 1.19
PACSIN3-209ENST00000532457 RABGAP1LQ5R372 815 aa22.46■■□□□ 1.19
PACSIN3-209ENST00000532457 NAT8LQ8N9F0 302 aa22.46■■□□□ 1.19
PACSIN3-209ENST00000532457 TSEN2Q8NCE0 465 aaKnown RBP22.46■■□□□ 1.19
PACSIN3-209ENST00000532457 FGF13Q92913 245 aa22.46■■□□□ 1.19
PACSIN3-209ENST00000532457 SPATA13Q96N96 652 aa22.46■■□□□ 1.19
PACSIN3-209ENST00000532457 FMO2Q99518 471 aa22.46■■□□□ 1.19
PACSIN3-209ENST00000532457 TXLNGYQ9BZA5 131 aa22.46■■□□□ 1.19
PACSIN3-209ENST00000532457 F5H423 210 aaPredicted RBP22.45■■□□□ 1.19
PACSIN3-209ENST00000532457 J3KR12 359 aa22.45■■□□□ 1.19
PACSIN3-209ENST00000532457 SASH3O75995 380 aa22.45■■□□□ 1.19
PACSIN3-209ENST00000532457 PEX11BO96011 259 aa22.45■■□□□ 1.19
PACSIN3-209ENST00000532457 GBP2P32456 591 aaPredicted RBP22.45■■□□□ 1.19
PACSIN3-209ENST00000532457 MAPKAPK2P49137 400 aa22.45■■□□□ 1.19
PACSIN3-209ENST00000532457 DDX50Q9BQ39 737 aaKnown RBP22.45■■□□□ 1.19
PACSIN3-209ENST00000532457 RAB6BQ9NRW1 208 aa22.45■■□□□ 1.19
PACSIN3-209ENST00000532457 IPO11Q9UI26 975 aaKnown RBP22.45■■□□□ 1.19
PACSIN3-209ENST00000532457 LSM7Q9UK45 103 aaKnown RBP22.45■■□□□ 1.19
PACSIN3-209ENST00000532457 CDH7Q9ULB5 785 aa22.45■■□□□ 1.19
PACSIN3-209ENST00000532457 HELZP42694 1942 aaKnown RBP22.45■■□□□ 1.18
PACSIN3-209ENST00000532457 MYO18AQ92614 2054 aaKnown RBP22.45■■□□□ 1.18
PACSIN3-209ENST00000532457 E2F8A0AVK6 867 aa22.45■■□□□ 1.18
PACSIN3-209ENST00000532457 TBL1XO60907 577 aa22.45■■□□□ 1.18
PACSIN3-209ENST00000532457 JCHAINP01591 159 aa22.45■■□□□ 1.18
PACSIN3-209ENST00000532457 CD68P34810 354 aaPredicted RBP22.45■■□□□ 1.18
PACSIN3-209ENST00000532457 POLD3Q15054 466 aaPredicted RBP22.45■■□□□ 1.18
PACSIN3-209ENST00000532457 FSCBQ5H9T9 825 aa22.45■■□□□ 1.18
PACSIN3-209ENST00000532457 NPAS3Q8IXF0 933 aa22.45■■□□□ 1.18
PACSIN3-209ENST00000532457 ATPAF2Q8N5M1 289 aa22.45■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms