RNA–Protein interactions for RNA: ENST00000531885.5

CMTM1-215, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CMTM1, Length 590 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-215ENST00000531885 CCDC114Q96M63 670 aa11.92□□□□□ -0.5
CMTM1-215ENST00000531885 ABCG4Q9H172 646 aa11.92□□□□□ -0.5
CMTM1-215ENST00000531885 ARMCX3Q9UH62 379 aaPredicted RBP11.92□□□□□ -0.5
CMTM1-215ENST00000531885 SLCO3A1Q9UIG8 710 aa11.92□□□□□ -0.5
CMTM1-215ENST00000531885 NEMP2A6NFY4 417 aa11.91□□□□□ -0.5
CMTM1-215ENST00000531885 WNT9AO14904 365 aa11.91□□□□□ -0.5
CMTM1-215ENST00000531885 PLRG1O43660 514 aaKnown RBP11.91□□□□□ -0.5
CMTM1-215ENST00000531885 SIGLEC6O43699 453 aa11.91□□□□□ -0.5
CMTM1-215ENST00000531885 THEGLP0DJG4 465 aa11.91□□□□□ -0.5
CMTM1-215ENST00000531885 SLC2A3P11169 496 aa11.91□□□□□ -0.5
CMTM1-215ENST00000531885 PDGFRAP16234 1089 aa11.91□□□□□ -0.5
CMTM1-215ENST00000531885 AKT2P31751 481 aa11.91□□□□□ -0.5
CMTM1-215ENST00000531885 STK19P49842 368 aaPredicted RBP11.91□□□□□ -0.5
CMTM1-215ENST00000531885 NDUFA8P51970 172 aa11.91□□□□□ -0.5
CMTM1-215ENST00000531885 MCCD1P59942 119 aaPredicted RBP11.91□□□□□ -0.5
CMTM1-215ENST00000531885 GABREP78334 506 aa11.91□□□□□ -0.5
CMTM1-215ENST00000531885 PROX2Q3B8N5 592 aa11.91□□□□□ -0.5
CMTM1-215ENST00000531885 PKDCCQ504Y2 493 aa11.91□□□□□ -0.5
CMTM1-215ENST00000531885 RAP1GAP2Q684P5 730 aa11.91□□□□□ -0.5
CMTM1-215ENST00000531885 KRBA2Q6ZNG9 492 aa11.91□□□□□ -0.5
CMTM1-215ENST00000531885 ERICH1Q86X53 443 aa11.91□□□□□ -0.5
CMTM1-215ENST00000531885 SPATS2Q86XZ4 545 aaKnown RBP11.91□□□□□ -0.5
CMTM1-215ENST00000531885 CLEC4CQ8WTT0 213 aa11.91□□□□□ -0.5
CMTM1-215ENST00000531885 KCNE4Q8WWG9 221 aa11.91□□□□□ -0.5
CMTM1-215ENST00000531885 WBP1Q96G27 269 aa11.91□□□□□ -0.5
CMTM1-215ENST00000531885 USP29Q9HBJ7 922 aa11.91□□□□□ -0.5
CMTM1-215ENST00000531885 PREBQ9HCU5 417 aa11.91□□□□□ -0.5
CMTM1-215ENST00000531885 DYRK4Q9NR20 520 aa11.91□□□□□ -0.5
CMTM1-215ENST00000531885 THSD1Q9NS62 852 aa11.91□□□□□ -0.5
CMTM1-215ENST00000531885 NYNRINQ9P2P1 1898 aaKnown RBP11.91□□□□□ -0.5
CMTM1-215ENST00000531885 ARID1BQ8NFD5 2236 aaPredicted RBP11.9□□□□□ -0.5
CMTM1-215ENST00000531885 A0A1B0GVM2 712 aa11.9□□□□□ -0.5
CMTM1-215ENST00000531885 TCAF2A6NFQ2 919 aa11.9□□□□□ -0.5
CMTM1-215ENST00000531885 ALOX15BO15296 676 aa11.9□□□□□ -0.5
CMTM1-215ENST00000531885 RTN2O75298 545 aa11.9□□□□□ -0.5
CMTM1-215ENST00000531885 TACR2P21452 398 aa11.9□□□□□ -0.5
CMTM1-215ENST00000531885 BRD2P25440 801 aaKnown RBP11.9□□□□□ -0.5
CMTM1-215ENST00000531885 DRD3P35462 400 aa11.9□□□□□ -0.5
CMTM1-215ENST00000531885 ERVPABLB-1P60509 514 aa11.9□□□□□ -0.5
CMTM1-215ENST00000531885 MTA1Q13330 715 aa11.9□□□□□ -0.5
CMTM1-215ENST00000531885 STIM1Q13586 685 aa11.9□□□□□ -0.5
CMTM1-215ENST00000531885 BEND5Q7L4P6 421 aa11.9□□□□□ -0.5
CMTM1-215ENST00000531885 TMC6Q7Z403 805 aa11.9□□□□□ -0.5
CMTM1-215ENST00000531885 APCDD1Q8J025 514 aa11.9□□□□□ -0.5
CMTM1-215ENST00000531885 OR4C6Q8NH72 309 aa11.9□□□□□ -0.5
CMTM1-215ENST00000531885 ERCC4Q92889 916 aaPredicted RBP11.9□□□□□ -0.5
CMTM1-215ENST00000531885 SNX21Q969T3 373 aa11.9□□□□□ -0.5
CMTM1-215ENST00000531885 SLC39A13Q96H72 371 aa11.9□□□□□ -0.5
CMTM1-215ENST00000531885 MED15Q96RN5 788 aa11.9□□□□□ -0.5
CMTM1-215ENST00000531885 DUSP23Q9BVJ7 150 aa11.9□□□□□ -0.5
CMTM1-215ENST00000531885 GTPBP4Q9BZE4 634 aaKnown RBP11.9□□□□□ -0.5
CMTM1-215ENST00000531885 DPH1Q9BZG8 443 aa11.9□□□□□ -0.5
CMTM1-215ENST00000531885 POPDC2Q9HBU9 364 aa11.9□□□□□ -0.5
CMTM1-215ENST00000531885 METTL14Q9HCE5 456 aaKnown RBP11.9□□□□□ -0.5
CMTM1-215ENST00000531885 KLHL11Q9NVR0 708 aa11.9□□□□□ -0.5
CMTM1-215ENST00000531885 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.9□□□□□ -0.5
CMTM1-215ENST00000531885 NAALADL1Q9UQQ1 740 aa11.9□□□□□ -0.5
CMTM1-215ENST00000531885 ATP6V1DQ9Y5K8 247 aa11.9□□□□□ -0.5
CMTM1-215ENST00000531885 TENM4Q6N022 2769 aa11.9□□□□□ -0.51
CMTM1-215ENST00000531885 TRIM38O00635 465 aa11.89□□□□□ -0.51
CMTM1-215ENST00000531885 FFAR2O15552 330 aa11.89□□□□□ -0.51
CMTM1-215ENST00000531885 MED7O43513 233 aa11.89□□□□□ -0.51
CMTM1-215ENST00000531885 BNIP3LO60238 219 aa11.89□□□□□ -0.51
CMTM1-215ENST00000531885 USP12O75317 370 aa11.89□□□□□ -0.51
CMTM1-215ENST00000531885 MPOP05164 745 aa11.89□□□□□ -0.51
CMTM1-215ENST00000531885 GP1BAP07359 652 aa11.89□□□□□ -0.51
CMTM1-215ENST00000531885 CKMT1AP12532 417 aa11.89□□□□□ -0.51
CMTM1-215ENST00000531885 DGKAP23743 735 aa11.89□□□□□ -0.51
CMTM1-215ENST00000531885 LRRC63Q05C16 580 aa11.89□□□□□ -0.51
CMTM1-215ENST00000531885 KCNMA1Q12791 1236 aa11.89□□□□□ -0.51
CMTM1-215ENST00000531885 CNTN1Q12860 1018 aa11.89□□□□□ -0.51
CMTM1-215ENST00000531885 POM121L1PQ3SYA9 428 aa11.89□□□□□ -0.51
CMTM1-215ENST00000531885 ZC3H12AQ5D1E8 599 aaKnown RBP11.89□□□□□ -0.51
CMTM1-215ENST00000531885 ARHGAP40Q5TG30 622 aa11.89□□□□□ -0.51
CMTM1-215ENST00000531885 NEK5Q6P3R8 708 aa11.89□□□□□ -0.51
CMTM1-215ENST00000531885 KANSL1Q7Z3B3 1105 aa11.89□□□□□ -0.51
CMTM1-215ENST00000531885 TAC4Q86UU9 113 aa11.89□□□□□ -0.51
CMTM1-215ENST00000531885 SMYD4Q8IYR2 804 aaPredicted RBP11.89□□□□□ -0.51
CMTM1-215ENST00000531885 CCAR2Q8N163 923 aaKnown RBP11.89□□□□□ -0.51
CMTM1-215ENST00000531885 FAM174AQ8TBP5 190 aa11.89□□□□□ -0.51
CMTM1-215ENST00000531885 TFAP2BQ92481 460 aa11.89□□□□□ -0.51
CMTM1-215ENST00000531885 CCDC97Q96F63 343 aaPredicted RBP11.89□□□□□ -0.51
CMTM1-215ENST00000531885 RPRD1AQ96P16 312 aaPredicted RBP11.89□□□□□ -0.51
CMTM1-215ENST00000531885 CALN1Q9BXU9 219 aa11.89□□□□□ -0.51
CMTM1-215ENST00000531885 FAM204AQ9H8W3 233 aa11.89□□□□□ -0.51
CMTM1-215ENST00000531885 POLR1BQ9H9Y6 1135 aa11.89□□□□□ -0.51
CMTM1-215ENST00000531885 NCKIPSDQ9NZQ3 722 aa11.89□□□□□ -0.51
CMTM1-215ENST00000531885 ARHGAP20Q9P2F6 1191 aa11.89□□□□□ -0.51
CMTM1-215ENST00000531885 PCDHB1Q9Y5F3 818 aa11.89□□□□□ -0.51
CMTM1-215ENST00000531885 COL6A6A6NMZ7 2263 aa11.89□□□□□ -0.51
CMTM1-215ENST00000531885 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.88□□□□□ -0.51
CMTM1-215ENST00000531885 FAM237AA0A1B0GTK4 181 aa11.88□□□□□ -0.51
CMTM1-215ENST00000531885 KCNU1A8MYU2 1149 aa11.88□□□□□ -0.51
CMTM1-215ENST00000531885 C10orf142B7Z368 130 aa11.88□□□□□ -0.51
CMTM1-215ENST00000531885 H3BM21 787 aa11.88□□□□□ -0.51
CMTM1-215ENST00000531885 RIOK3O14730 519 aaKnown RBP11.88□□□□□ -0.51
CMTM1-215ENST00000531885 MCF2LO15068 1137 aa11.88□□□□□ -0.51
CMTM1-215ENST00000531885 SLC31A1O15431 190 aa11.88□□□□□ -0.51
CMTM1-215ENST00000531885 KLK10O43240 276 aa11.88□□□□□ -0.51
CMTM1-215ENST00000531885 OPA1O60313 960 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms