RNA–Protein interactions for RNA: ENST00000531480.2

CPSF1-206, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3

Gene CPSF1, Length 789 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-206ENST00000531480 POLR2EP19388 210 aaKnown RBP14.84□□□□□ -0.03
CPSF1-206ENST00000531480 NTSR1P30989 418 aa14.84□□□□□ -0.03
CPSF1-206ENST00000531480 TIE1P35590 1138 aa14.84□□□□□ -0.03
CPSF1-206ENST00000531480 CCR3P51677 355 aa14.84□□□□□ -0.03
CPSF1-206ENST00000531480 SEC13P55735 322 aa14.84□□□□□ -0.03
CPSF1-206ENST00000531480 YBEYP58557 167 aaPredicted RBP14.84□□□□□ -0.03
CPSF1-206ENST00000531480 GNA12Q03113 381 aa14.84□□□□□ -0.03
CPSF1-206ENST00000531480 SULT2A1Q06520 285 aa14.84□□□□□ -0.03
CPSF1-206ENST00000531480 PDK2Q15119 407 aa14.84□□□□□ -0.03
CPSF1-206ENST00000531480 C2orf27AQ580R0 203 aa14.84□□□□□ -0.03
CPSF1-206ENST00000531480 RWDD4Q6NW29 188 aaKnown RBP14.84□□□□□ -0.03
CPSF1-206ENST00000531480 ZSCAN30Q86W11 494 aa14.84□□□□□ -0.03
CPSF1-206ENST00000531480 RHOT1Q8IXI2 618 aa14.84□□□□□ -0.03
CPSF1-206ENST00000531480 ALLCQ8N6M5 410 aa14.84□□□□□ -0.03
CPSF1-206ENST00000531480 DCAF4L2Q8NA75 395 aa14.84□□□□□ -0.03
CPSF1-206ENST00000531480 HSPH1Q92598 858 aa14.84□□□□□ -0.03
CPSF1-206ENST00000531480 NELL1Q92832 810 aa14.84□□□□□ -0.03
CPSF1-206ENST00000531480 CSPG4P5Q96PW8 444 aa14.84□□□□□ -0.03
CPSF1-206ENST00000531480 ACOX2Q99424 681 aa14.84□□□□□ -0.03
CPSF1-206ENST00000531480 ZNF670Q9BS34 389 aa14.84□□□□□ -0.03
CPSF1-206ENST00000531480 TSGA10Q9BZW7 698 aa14.84□□□□□ -0.03
CPSF1-206ENST00000531480 MAGEH1Q9H213 219 aa14.84□□□□□ -0.03
CPSF1-206ENST00000531480 KCNH6Q9H252 994 aa14.84□□□□□ -0.03
CPSF1-206ENST00000531480 LRRC19Q9H756 370 aa14.84□□□□□ -0.03
CPSF1-206ENST00000531480 TRIM10Q9UDY6 481 aa14.84□□□□□ -0.03
CPSF1-206ENST00000531480 FBXO4Q9UKT5 387 aa14.84□□□□□ -0.03
CPSF1-206ENST00000531480 GRID2IPA4D2P6 1211 aa14.83□□□□□ -0.04
CPSF1-206ENST00000531480 TMEM110-MUSTN1A8MSY1 372 aa14.83□□□□□ -0.04
CPSF1-206ENST00000531480 H3BRJ5 948 aa14.83□□□□□ -0.04
CPSF1-206ENST00000531480 K7ESF4 209 aa14.83□□□□□ -0.04
CPSF1-206ENST00000531480 SGK1O00141 431 aa14.83□□□□□ -0.04
CPSF1-206ENST00000531480 ZSCAN12O43309 604 aa14.83□□□□□ -0.04
CPSF1-206ENST00000531480 BUB1O43683 1085 aa14.83□□□□□ -0.04
CPSF1-206ENST00000531480 ZMPSTE24O75844 475 aa14.83□□□□□ -0.04
CPSF1-206ENST00000531480 KLF8O95600 359 aaPredicted RBP14.83□□□□□ -0.04
CPSF1-206ENST00000531480 CD48P09326 243 aa14.83□□□□□ -0.04
CPSF1-206ENST00000531480 ERCC2P18074 760 aa14.83□□□□□ -0.04
CPSF1-206ENST00000531480 ETFBP38117 255 aa14.83□□□□□ -0.04
CPSF1-206ENST00000531480 CXCL12P48061 93 aa14.83□□□□□ -0.04
CPSF1-206ENST00000531480 PTPN5P54829 565 aa14.83□□□□□ -0.04
CPSF1-206ENST00000531480 ECT2LQ008S8 904 aa14.83□□□□□ -0.04
CPSF1-206ENST00000531480 TCF15Q12870 199 aa14.83□□□□□ -0.04
CPSF1-206ENST00000531480 DPYSL3Q14195 570 aa14.83□□□□□ -0.04
CPSF1-206ENST00000531480 ZNF234Q14588 700 aa14.83□□□□□ -0.04
CPSF1-206ENST00000531480 CRY1Q16526 586 aa14.83□□□□□ -0.04
CPSF1-206ENST00000531480 TAZQ16635 292 aa14.83□□□□□ -0.04
CPSF1-206ENST00000531480 PPP6R3Q5H9R7 873 aaPredicted RBP14.83□□□□□ -0.04
CPSF1-206ENST00000531480 RNF219Q5W0B1 726 aaPredicted RBP14.83□□□□□ -0.04
CPSF1-206ENST00000531480 TXNDC5Q8NBS9 432 aaKnown RBP14.83□□□□□ -0.04
CPSF1-206ENST00000531480 UBE2Q2Q8WVN8 375 aa14.83□□□□□ -0.04
CPSF1-206ENST00000531480 SORCS1Q8WY21 1168 aa14.83□□□□□ -0.04
CPSF1-206ENST00000531480 ARHGEF2Q92974 986 aaKnown RBP14.83□□□□□ -0.04
CPSF1-206ENST00000531480 PRRX2Q99811 253 aa14.83□□□□□ -0.04
CPSF1-206ENST00000531480 CIPCQ9C0C6 399 aa14.83□□□□□ -0.04
CPSF1-206ENST00000531480 GOLPH3Q9H4A6 298 aa14.83□□□□□ -0.04
CPSF1-206ENST00000531480 ERVW-1Q9UQF0 538 aa14.83□□□□□ -0.04
CPSF1-206ENST00000531480 HS3ST2Q9Y278 367 aa14.83□□□□□ -0.04
CPSF1-206ENST00000531480 EML5Q05BV3 1969 aa14.82□□□□□ -0.04
CPSF1-206ENST00000531480 CACNA1HO95180 2353 aa14.82□□□□□ -0.04
CPSF1-206ENST00000531480 A0A1W2PQF6 199 aa14.82□□□□□ -0.04
CPSF1-206ENST00000531480 GOLGA6L9A6NEM1 432 aa14.82□□□□□ -0.04
CPSF1-206ENST00000531480 KRT86O43790 486 aa14.82□□□□□ -0.04
CPSF1-206ENST00000531480 KDELR1P24390 212 aa14.82□□□□□ -0.04
CPSF1-206ENST00000531480 ARL4AP40617 200 aa14.82□□□□□ -0.04
CPSF1-206ENST00000531480 IL12RB1P42701 662 aa14.82□□□□□ -0.04
CPSF1-206ENST00000531480 NDST2P52849 883 aa14.82□□□□□ -0.04
CPSF1-206ENST00000531480 CDH6P55285 790 aa14.82□□□□□ -0.04
CPSF1-206ENST00000531480 SATB1Q01826 763 aa14.82□□□□□ -0.04
CPSF1-206ENST00000531480 IFI16Q16666 785 aaKnown RBP14.82□□□□□ -0.04
CPSF1-206ENST00000531480 ZNF528Q3MIS6 628 aa14.82□□□□□ -0.04
CPSF1-206ENST00000531480 PARP15Q460N3 678 aa14.82□□□□□ -0.04
CPSF1-206ENST00000531480 EOGTQ5NDL2 527 aa14.82□□□□□ -0.04
CPSF1-206ENST00000531480 TMEM92Q6UXU6 159 aa14.82□□□□□ -0.04
CPSF1-206ENST00000531480 DAAM2Q86T65 1068 aa14.82□□□□□ -0.04
CPSF1-206ENST00000531480 MAP7D3Q8IWC1 876 aa14.82□□□□□ -0.04
CPSF1-206ENST00000531480 ARHGAP12Q8IWW6 846 aa14.82□□□□□ -0.04
CPSF1-206ENST00000531480 CAMKK1Q8N5S9 505 aa14.82□□□□□ -0.04
CPSF1-206ENST00000531480 LZTR1Q8N653 840 aa14.82□□□□□ -0.04
CPSF1-206ENST00000531480 KIAA1524Q8TCG1 905 aa14.82□□□□□ -0.04
CPSF1-206ENST00000531480 RAPGEF5Q92565 580 aa14.82□□□□□ -0.04
CPSF1-206ENST00000531480 C2orf49Q9BVC5 232 aaPredicted RBP14.82□□□□□ -0.04
CPSF1-206ENST00000531480 MUC3BQ9H195 1237 aa14.82□□□□□ -0.04
CPSF1-206ENST00000531480 SPATA6Q9NWH7 488 aaPredicted RBP14.82□□□□□ -0.04
CPSF1-206ENST00000531480 DDX56Q9NY93 547 aaKnown RBP14.82□□□□□ -0.04
CPSF1-206ENST00000531480 DNAI1Q9UI46 699 aa14.82□□□□□ -0.04
CPSF1-206ENST00000531480 VPS51Q9UID3 782 aa14.82□□□□□ -0.04
CPSF1-206ENST00000531480 VPS28Q9UK41 221 aa14.82□□□□□ -0.04
CPSF1-206ENST00000531480 PLA2G4CQ9UP65 541 aa14.82□□□□□ -0.04
CPSF1-206ENST00000531480 ZKSCAN5Q9Y2L8 839 aa14.82□□□□□ -0.04
CPSF1-206ENST00000531480 PPP2R2CQ9Y2T4 447 aa14.82□□□□□ -0.04
CPSF1-206ENST00000531480 HYOU1Q9Y4L1 999 aa14.82□□□□□ -0.04
CPSF1-206ENST00000531480 STON1Q9Y6Q2 735 aa14.82□□□□□ -0.04
CPSF1-206ENST00000531480 PLXND1Q9Y4D7 1925 aa14.82□□□□□ -0.04
CPSF1-206ENST00000531480 CCDC163A0A0D9SF12 145 aa14.81□□□□□ -0.04
CPSF1-206ENST00000531480 SPOPO43791 374 aa14.81□□□□□ -0.04
CPSF1-206ENST00000531480 ATP9BO43861 1147 aa14.81□□□□□ -0.04
CPSF1-206ENST00000531480 RAMP2O60895 175 aa14.81□□□□□ -0.04
CPSF1-206ENST00000531480 CD160O95971 181 aa14.81□□□□□ -0.04
CPSF1-206ENST00000531480 TUBB4AP04350 444 aa14.81□□□□□ -0.04
CPSF1-206ENST00000531480 CTNNA1P35221 906 aaKnown RBP14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms