RNA–Protein interactions for RNA: ENST00000531430.5

NEDD8-206, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 651 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-206ENST00000531430 DEPDC7Q96QD5 511 aa9.53□□□□□ -0.88
NEDD8-206ENST00000531430 IRX2Q9BZI1 471 aaPredicted RBP9.53□□□□□ -0.88
NEDD8-206ENST00000531430 CLMPQ9H6B4 373 aa9.53□□□□□ -0.88
NEDD8-206ENST00000531430 FZD3Q9NPG1 666 aa9.53□□□□□ -0.88
NEDD8-206ENST00000531430 ARHGAP20Q9P2F6 1191 aa9.53□□□□□ -0.88
NEDD8-206ENST00000531430 SLC12A6Q9UHW9 1150 aa9.53□□□□□ -0.88
NEDD8-206ENST00000531430 RCOR1Q9UKL0 485 aa9.53□□□□□ -0.88
NEDD8-206ENST00000531430 SARDHQ9UL12 918 aa9.53□□□□□ -0.88
NEDD8-206ENST00000531430 TPX2Q9ULW0 747 aaKnown RBP9.53□□□□□ -0.88
NEDD8-206ENST00000531430 DMTF1Q9Y222 760 aa9.53□□□□□ -0.88
NEDD8-206ENST00000531430 ARID1BQ8NFD5 2236 aaPredicted RBP9.53□□□□□ -0.88
NEDD8-206ENST00000531430 TP53BP1Q12888 1972 aaPredicted RBP9.53□□□□□ -0.88
NEDD8-206ENST00000531430 DOCK9Q9BZ29 2069 aa9.52□□□□□ -0.88
NEDD8-206ENST00000531430 A0A1W2PQU0 124 aa9.52□□□□□ -0.89
NEDD8-206ENST00000531430 C1QTNF3-AMACRE9PGA6 284 aa9.52□□□□□ -0.89
NEDD8-206ENST00000531430 F5H5T6 163 aa9.52□□□□□ -0.89
NEDD8-206ENST00000531430 O00370 1275 aa9.52□□□□□ -0.89
NEDD8-206ENST00000531430 ARHGAP6O43182 974 aa9.52□□□□□ -0.89
NEDD8-206ENST00000531430 GABBR2O75899 941 aa9.52□□□□□ -0.89
NEDD8-206ENST00000531430 RHOBTB3O94955 611 aa9.52□□□□□ -0.89
NEDD8-206ENST00000531430 IGLV3-27P01718 113 aa9.52□□□□□ -0.89
NEDD8-206ENST00000531430 C7P10643 843 aa9.52□□□□□ -0.89
NEDD8-206ENST00000531430 CMA1P23946 247 aa9.52□□□□□ -0.89
NEDD8-206ENST00000531430 DRD3P35462 400 aa9.52□□□□□ -0.89
NEDD8-206ENST00000531430 UCNP55089 124 aa9.52□□□□□ -0.89
NEDD8-206ENST00000531430 CLDN2P57739 230 aa9.52□□□□□ -0.89
NEDD8-206ENST00000531430 VAC14Q08AM6 782 aa9.52□□□□□ -0.89
NEDD8-206ENST00000531430 OVGP1Q12889 678 aa9.52□□□□□ -0.89
NEDD8-206ENST00000531430 DLG2Q15700 870 aa9.52□□□□□ -0.89
NEDD8-206ENST00000531430 CNGA2Q16280 664 aa9.52□□□□□ -0.89
NEDD8-206ENST00000531430 NFIL3Q16649 462 aa9.52□□□□□ -0.89
NEDD8-206ENST00000531430 ZSCAN23Q3MJ62 389 aa9.52□□□□□ -0.89
NEDD8-206ENST00000531430 C3orf38Q5JPI3 329 aa9.52□□□□□ -0.89
NEDD8-206ENST00000531430 SYPL2Q5VXT5 272 aa9.52□□□□□ -0.89
NEDD8-206ENST00000531430 CRTC1Q6UUV9 634 aa9.52□□□□□ -0.89
NEDD8-206ENST00000531430 LCLAT1Q6UWP7 414 aa9.52□□□□□ -0.89
NEDD8-206ENST00000531430 KANSL1Q7Z3B3 1105 aa9.52□□□□□ -0.89
NEDD8-206ENST00000531430 PRICKLE2Q7Z3G6 844 aa9.52□□□□□ -0.89
NEDD8-206ENST00000531430 IQCHQ86VS3 1027 aa9.52□□□□□ -0.89
NEDD8-206ENST00000531430 SMYD4Q8IYR2 804 aaPredicted RBP9.52□□□□□ -0.89
NEDD8-206ENST00000531430 CACTIN-AS1Q8N1I8 211 aa9.52□□□□□ -0.89
NEDD8-206ENST00000531430 GUF1Q8N442 669 aaKnown RBP9.52□□□□□ -0.89
NEDD8-206ENST00000531430 SLC35F5Q8WV83 523 aa9.52□□□□□ -0.89
NEDD8-206ENST00000531430 RFFLQ8WZ73 363 aa9.52□□□□□ -0.89
NEDD8-206ENST00000531430 APOLD1Q96LR9 279 aa9.52□□□□□ -0.89
NEDD8-206ENST00000531430 SPAG5Q96R06 1193 aa9.52□□□□□ -0.89
NEDD8-206ENST00000531430 KLHL11Q9NVR0 708 aa9.52□□□□□ -0.89
NEDD8-206ENST00000531430 DNAJC28Q9NX36 388 aa9.52□□□□□ -0.89
NEDD8-206ENST00000531430 USP25Q9UHP3 1055 aa9.52□□□□□ -0.89
NEDD8-206ENST00000531430 IPO11Q9UI26 975 aaKnown RBP9.52□□□□□ -0.89
NEDD8-206ENST00000531430 SLC25A13Q9UJS0 675 aa9.52□□□□□ -0.89
NEDD8-206ENST00000531430 TLR6Q9Y2C9 796 aa9.52□□□□□ -0.89
NEDD8-206ENST00000531430 ITIH6Q6UXX5 1313 aa9.52□□□□□ -0.89
NEDD8-206ENST00000531430 NAV2Q8IVL1 2488 aa9.51□□□□□ -0.89
NEDD8-206ENST00000531430 A0A1B0GVM2 712 aa9.51□□□□□ -0.89
NEDD8-206ENST00000531430 NEMP2A6NFY4 417 aa9.51□□□□□ -0.89
NEDD8-206ENST00000531430 RNF225M0QZC1 329 aaPredicted RBP9.51□□□□□ -0.89
NEDD8-206ENST00000531430 KPNA3O00505 521 aaPredicted RBP9.51□□□□□ -0.89
NEDD8-206ENST00000531430 LATO43561 262 aa9.51□□□□□ -0.89
NEDD8-206ENST00000531430 PLRG1O43660 514 aaKnown RBP9.51□□□□□ -0.89
NEDD8-206ENST00000531430 NEBLO76041 1014 aa9.51□□□□□ -0.89
NEDD8-206ENST00000531430 FBXO21O94952 628 aa9.51□□□□□ -0.89
NEDD8-206ENST00000531430 MYL1P05976 194 aa9.51□□□□□ -0.89
NEDD8-206ENST00000531430 FYNP06241 537 aa9.51□□□□□ -0.89
NEDD8-206ENST00000531430 C6P13671 934 aa9.51□□□□□ -0.89
NEDD8-206ENST00000531430 AKT2P31751 481 aa9.51□□□□□ -0.89
NEDD8-206ENST00000531430 NUDT1P36639 197 aa9.51□□□□□ -0.89
NEDD8-206ENST00000531430 LSSP48449 732 aa9.51□□□□□ -0.89
NEDD8-206ENST00000531430 DUSP3P51452 185 aaPredicted RBP9.51□□□□□ -0.89
NEDD8-206ENST00000531430 NDUFA8P51970 172 aa9.51□□□□□ -0.89
NEDD8-206ENST00000531430 SULT2A1Q06520 285 aa9.51□□□□□ -0.89
NEDD8-206ENST00000531430 KCNMA1Q12791 1236 aa9.51□□□□□ -0.89
NEDD8-206ENST00000531430 MAPK8IP2Q13387 824 aaPredicted RBP9.51□□□□□ -0.89
NEDD8-206ENST00000531430 ARID5BQ14865 1188 aa9.51□□□□□ -0.89
NEDD8-206ENST00000531430 TAC4Q86UU9 113 aa9.51□□□□□ -0.89
NEDD8-206ENST00000531430 CCAR2Q8N163 923 aaKnown RBP9.51□□□□□ -0.89
NEDD8-206ENST00000531430 PPM1KQ8N3J5 372 aa9.51□□□□□ -0.89
NEDD8-206ENST00000531430 ATP6V0D2Q8N8Y2 350 aa9.51□□□□□ -0.89
NEDD8-206ENST00000531430 OR4C6Q8NH72 309 aa9.51□□□□□ -0.89
NEDD8-206ENST00000531430 IFI44Q8TCB0 444 aa9.51□□□□□ -0.89
NEDD8-206ENST00000531430 HSFY1Q96LI6 401 aa9.51□□□□□ -0.89
NEDD8-206ENST00000531430 SPATA32Q96LK8 384 aa9.51□□□□□ -0.89
NEDD8-206ENST00000531430 PPP1R9BQ96SB3 815 aa9.51□□□□□ -0.89
NEDD8-206ENST00000531430 TSG101Q99816 390 aa9.51□□□□□ -0.89
NEDD8-206ENST00000531430 FAM117AQ9C073 453 aa9.51□□□□□ -0.89
NEDD8-206ENST00000531430 KDM4CQ9H3R0 1056 aa9.51□□□□□ -0.89
NEDD8-206ENST00000531430 SYNDIG1Q9H7V2 258 aa9.51□□□□□ -0.89
NEDD8-206ENST00000531430 POLR1BQ9H9Y6 1135 aa9.51□□□□□ -0.89
NEDD8-206ENST00000531430 DYRK4Q9NR20 520 aa9.51□□□□□ -0.89
NEDD8-206ENST00000531430 THSD1Q9NS62 852 aa9.51□□□□□ -0.89
NEDD8-206ENST00000531430 EVA1BQ9NVM1 165 aa9.51□□□□□ -0.89
NEDD8-206ENST00000531430 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.51□□□□□ -0.89
NEDD8-206ENST00000531430 SATB2Q9UPW6 733 aa9.51□□□□□ -0.89
NEDD8-206ENST00000531430 FARP1Q9Y4F1 1045 aaPredicted RBP9.51□□□□□ -0.89
NEDD8-206ENST00000531430 HEMK1Q9Y5R4 338 aaPredicted RBP9.51□□□□□ -0.89
NEDD8-206ENST00000531430 COL5A1P20908 1838 aaPredicted RBP9.51□□□□□ -0.89
NEDD8-206ENST00000531430 PIEZO2Q9H5I5 2752 aa9.51□□□□□ -0.89
NEDD8-206ENST00000531430 MAST4O15021 2626 aa9.51□□□□□ -0.89
NEDD8-206ENST00000531430 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP9.5□□□□□ -0.89
NEDD8-206ENST00000531430 SLC7A4O43246 635 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms