RNA–Protein interactions for RNA: ENST00000530906.1

PCF11-205, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 3

Gene PCF11, Length 628 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-205ENST00000530906 DYNC1LI1Q9Y6G9 523 aaKnown RBP5.73□□□□□ -1.49
PCF11-205ENST00000530906 TSC2P49815 1807 aa5.73□□□□□ -1.49
PCF11-205ENST00000530906 PATJQ8NI35 1801 aa5.73□□□□□ -1.49
PCF11-205ENST00000530906 KRTAP4-8A0A0G2JLE6 195 aa5.72□□□□□ -1.49
PCF11-205ENST00000530906 TCRBV9S1A1TA0A576 114 aa5.72□□□□□ -1.49
PCF11-205ENST00000530906 ARL5CA6NH57 179 aa5.72□□□□□ -1.49
PCF11-205ENST00000530906 POC1B-GALNT4F8VUJ3 575 aa5.72□□□□□ -1.49
PCF11-205ENST00000530906 H0YHG0 523 aa5.72□□□□□ -1.49
PCF11-205ENST00000530906 TMEM189-UBE2V1I3L0A0 370 aa5.72□□□□□ -1.49
PCF11-205ENST00000530906 M0QZQ0 153 aa5.72□□□□□ -1.49
PCF11-205ENST00000530906 CAPN9O14815 690 aa5.72□□□□□ -1.49
PCF11-205ENST00000530906 KLF11O14901 512 aa5.72□□□□□ -1.49
PCF11-205ENST00000530906 PSMD3O43242 534 aa5.72□□□□□ -1.49
PCF11-205ENST00000530906 TYROBPO43914 113 aa5.72□□□□□ -1.49
PCF11-205ENST00000530906 HNRNPCL1O60812 293 aaKnown RBP5.72□□□□□ -1.49
PCF11-205ENST00000530906 GRAP2O75791 330 aa5.72□□□□□ -1.49
PCF11-205ENST00000530906 DCTN3O75935 186 aa5.72□□□□□ -1.49
PCF11-205ENST00000530906 DNAJC8O75937 253 aaPredicted RBP5.72□□□□□ -1.49
PCF11-205ENST00000530906 EOMESO95936 686 aa5.72□□□□□ -1.49
PCF11-205ENST00000530906 CHRNA1P02708 482 aa5.72□□□□□ -1.49
PCF11-205ENST00000530906 LTFP02788 710 aa5.72□□□□□ -1.49
PCF11-205ENST00000530906 MT-ND3P03897 115 aa5.72□□□□□ -1.49
PCF11-205ENST00000530906 SNRPAP09012 282 aaKnown RBP5.72□□□□□ -1.49
PCF11-205ENST00000530906 LCP1P13796 627 aa5.72□□□□□ -1.49
PCF11-205ENST00000530906 ETS1P14921 441 aa5.72□□□□□ -1.49
PCF11-205ENST00000530906 CA4P22748 312 aa5.72□□□□□ -1.49
PCF11-205ENST00000530906 LMO2P25791 158 aa5.72□□□□□ -1.49
PCF11-205ENST00000530906 RBL1P28749 1068 aa5.72□□□□□ -1.49
PCF11-205ENST00000530906 TKTP29401 623 aaKnown RBP5.72□□□□□ -1.49
PCF11-205ENST00000530906 ADRA1BP35368 520 aa5.72□□□□□ -1.49
PCF11-205ENST00000530906 MLH1P40692 756 aa5.72□□□□□ -1.49
PCF11-205ENST00000530906 ELK3P41970 407 aa5.72□□□□□ -1.49
PCF11-205ENST00000530906 PREPP48147 710 aa5.72□□□□□ -1.49
PCF11-205ENST00000530906 TKTL1P51854 596 aa5.72□□□□□ -1.49
PCF11-205ENST00000530906 TSPY1Q01534 308 aa5.72□□□□□ -1.49
PCF11-205ENST00000530906 SLC18A2Q05940 514 aa5.72□□□□□ -1.49
PCF11-205ENST00000530906 DEUP1Q05D60 604 aa5.72□□□□□ -1.49
PCF11-205ENST00000530906 CDK18Q07002 472 aa5.72□□□□□ -1.49
PCF11-205ENST00000530906 SEMA3BQ13214 749 aa5.72□□□□□ -1.49
PCF11-205ENST00000530906 NOGQ13253 232 aa5.72□□□□□ -1.49
PCF11-205ENST00000530906 DPYSQ14117 519 aa5.72□□□□□ -1.49
PCF11-205ENST00000530906 FASTKD3Q14CZ7 662 aaKnown RBP5.72□□□□□ -1.49
PCF11-205ENST00000530906 ARHGEF6Q15052 776 aa5.72□□□□□ -1.49
PCF11-205ENST00000530906 TAF5Q15542 800 aa5.72□□□□□ -1.49
PCF11-205ENST00000530906 SEPT7Q16181 437 aaKnown RBP5.72□□□□□ -1.49
PCF11-205ENST00000530906 UPP1Q16831 310 aa5.72□□□□□ -1.49
PCF11-205ENST00000530906 PARP6Q2NL67 630 aa5.72□□□□□ -1.49
PCF11-205ENST00000530906 TTC31Q49AM3 519 aaPredicted RBP5.72□□□□□ -1.49
PCF11-205ENST00000530906 DCAF6Q58WW2 860 aa5.72□□□□□ -1.49
PCF11-205ENST00000530906 MDH1BQ5I0G3 518 aa5.72□□□□□ -1.49
PCF11-205ENST00000530906 BRMS1LQ5PSV4 323 aa5.72□□□□□ -1.49
PCF11-205ENST00000530906 FNBP1LQ5T0N5 605 aa5.72□□□□□ -1.49
PCF11-205ENST00000530906 STXBP5Q5T5C0 1151 aa5.72□□□□□ -1.49
PCF11-205ENST00000530906 RNF187Q5TA31 235 aaPredicted RBP5.72□□□□□ -1.49
PCF11-205ENST00000530906 HHATQ5VTY9 493 aa5.72□□□□□ -1.49
PCF11-205ENST00000530906 FYB2Q5VWT5 728 aa5.72□□□□□ -1.49
PCF11-205ENST00000530906 ANKRD22Q5VYY1 191 aa5.72□□□□□ -1.49
PCF11-205ENST00000530906 STEAP4Q687X5 459 aa5.72□□□□□ -1.49
PCF11-205ENST00000530906 NUGGCQ68CJ6 796 aa5.72□□□□□ -1.49
PCF11-205ENST00000530906 NCBP2-AS2Q69YL0 99 aa5.72□□□□□ -1.49
PCF11-205ENST00000530906 ITPRIPL1Q6GPH6 555 aa5.72□□□□□ -1.49
PCF11-205ENST00000530906 CCSAPQ6IQ19 270 aaPredicted RBP5.72□□□□□ -1.49
PCF11-205ENST00000530906 FAM171BQ6P995 826 aa5.72□□□□□ -1.49
PCF11-205ENST00000530906 C1orf228Q6PIY5 440 aa5.72□□□□□ -1.49
PCF11-205ENST00000530906 DCLRE1AQ6PJP8 1040 aa5.72□□□□□ -1.49
PCF11-205ENST00000530906 KCNT2Q6UVM3 1135 aa5.72□□□□□ -1.49
PCF11-205ENST00000530906 CXCL17Q6UXB2 119 aa5.72□□□□□ -1.49
PCF11-205ENST00000530906 AGMOQ6ZNB7 445 aa5.72□□□□□ -1.49
PCF11-205ENST00000530906 C4orf50Q6ZRC1 276 aa5.72□□□□□ -1.49
PCF11-205ENST00000530906 RFX8Q6ZV50 586 aa5.72□□□□□ -1.49
PCF11-205ENST00000530906 TRPM8Q7Z2W7 1104 aa5.72□□□□□ -1.49
PCF11-205ENST00000530906 SPATA21Q7Z572 469 aa5.72□□□□□ -1.49
PCF11-205ENST00000530906 RNF180Q86T96 592 aa5.72□□□□□ -1.49
PCF11-205ENST00000530906 OSTM1Q86WC4 334 aa5.72□□□□□ -1.49
PCF11-205ENST00000530906 CHSY1Q86X52 802 aa5.72□□□□□ -1.49
PCF11-205ENST00000530906 LRRC49Q8IUZ0 686 aa5.72□□□□□ -1.49
PCF11-205ENST00000530906 C10orf67Q8IYJ2 551 aa5.72□□□□□ -1.49
PCF11-205ENST00000530906 LRRC34Q8IZ02 419 aa5.72□□□□□ -1.49
PCF11-205ENST00000530906 DEFB106AQ8N104 65 aa5.72□□□□□ -1.49
PCF11-205ENST00000530906 THEM5Q8N1Q8 247 aa5.72□□□□□ -1.49
PCF11-205ENST00000530906 ARRDC4Q8NCT1 418 aa5.72□□□□□ -1.49
PCF11-205ENST00000530906 SMC1BQ8NDV3 1235 aa5.72□□□□□ -1.49
PCF11-205ENST00000530906 GSTCDQ8NEC7 633 aa5.72□□□□□ -1.49
PCF11-205ENST00000530906 TRPV1Q8NER1 839 aa5.72□□□□□ -1.49
PCF11-205ENST00000530906 GSDMBQ8TAX9 411 aa5.72□□□□□ -1.49
PCF11-205ENST00000530906 LRRC8CQ8TDW0 803 aa5.72□□□□□ -1.49
PCF11-205ENST00000530906 ACMSDQ8TDX5 336 aa5.72□□□□□ -1.49
PCF11-205ENST00000530906 FBF1Q8TES7 1133 aa5.72□□□□□ -1.49
PCF11-205ENST00000530906 RNF139Q8WU17 664 aa5.72□□□□□ -1.49
PCF11-205ENST00000530906 DCAKDQ8WVC6 231 aa5.72□□□□□ -1.49
PCF11-205ENST00000530906 HTR3CQ8WXA8 447 aa5.72□□□□□ -1.49
PCF11-205ENST00000530906 TRIB2Q92519 343 aa5.72□□□□□ -1.49
PCF11-205ENST00000530906 TTC17Q96AE7 1141 aa5.72□□□□□ -1.49
PCF11-205ENST00000530906 FUBP3Q96I24 572 aaKnown RBP eCLIP5.72□□□□□ -1.49
PCF11-205ENST00000530906 APOPT1Q96IL0 206 aa5.72□□□□□ -1.49
PCF11-205ENST00000530906 GAD1Q99259 594 aa5.72□□□□□ -1.49
PCF11-205ENST00000530906 EBNA1BP2Q99848 306 aaKnown RBP5.72□□□□□ -1.49
PCF11-205ENST00000530906 MED10Q9BTT4 135 aa5.72□□□□□ -1.49
PCF11-205ENST00000530906 FTHL17Q9BXU8 183 aa5.72□□□□□ -1.49
PCF11-205ENST00000530906 B3GNT5Q9BYG0 378 aa5.72□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms