RNA–Protein interactions for RNA: ENST00000530758.1

BRK1-201, Transcript of BRICK1, SCAR/WAVE actin nucleating complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRK1, Length 1,233 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRK1-201ENST00000530758 KDM1BQ8NB78 822 aa16.46■□□□□ 0.23
BRK1-201ENST00000530758 TRIM58Q8NG06 486 aa16.46■□□□□ 0.23
BRK1-201ENST00000530758 KRT35Q92764 455 aa16.46■□□□□ 0.23
BRK1-201ENST00000530758 RNF157Q96PX1 679 aa16.46■□□□□ 0.23
BRK1-201ENST00000530758 ACE2Q9BYF1 805 aaPredicted RBP16.46■□□□□ 0.23
BRK1-201ENST00000530758 KCNH6Q9H252 994 aa16.46■□□□□ 0.23
BRK1-201ENST00000530758 NOL6Q9H6R4 1146 aaKnown RBP16.46■□□□□ 0.23
BRK1-201ENST00000530758 LRRC19Q9H756 370 aa16.46■□□□□ 0.23
BRK1-201ENST00000530758 GOLGA6L9A6NEM1 432 aa16.45■□□□□ 0.22
BRK1-201ENST00000530758 DAPK3O43293 454 aa16.45■□□□□ 0.22
BRK1-201ENST00000530758 PI15O43692 258 aa16.45■□□□□ 0.22
BRK1-201ENST00000530758 ZRANB2O95218 330 aaKnown RBP eCLIP16.45■□□□□ 0.22
BRK1-201ENST00000530758 ASLP04424 464 aa16.45■□□□□ 0.22
BRK1-201ENST00000530758 AMPD1P23109 780 aa16.45■□□□□ 0.22
BRK1-201ENST00000530758 ETFBP38117 255 aa16.45■□□□□ 0.22
BRK1-201ENST00000530758 COPS2P61201 443 aa16.45■□□□□ 0.22
BRK1-201ENST00000530758 NHLH1Q02575 133 aa16.45■□□□□ 0.22
BRK1-201ENST00000530758 GNA12Q03113 381 aa16.45■□□□□ 0.22
BRK1-201ENST00000530758 SULT2A1Q06520 285 aa16.45■□□□□ 0.22
BRK1-201ENST00000530758 FUT11Q495W5 492 aa16.45■□□□□ 0.22
BRK1-201ENST00000530758 PITRM1Q5JRX3 1037 aa16.45■□□□□ 0.22
BRK1-201ENST00000530758 MEI1Q5TIA1 1274 aa16.45■□□□□ 0.22
BRK1-201ENST00000530758 RNF219Q5W0B1 726 aaPredicted RBP16.45■□□□□ 0.22
BRK1-201ENST00000530758 MBLAC2Q68D91 279 aa16.45■□□□□ 0.22
BRK1-201ENST00000530758 FLCNQ8NFG4 579 aa16.45■□□□□ 0.22
BRK1-201ENST00000530758 PCDH19Q8TAB3 1148 aa16.45■□□□□ 0.22
BRK1-201ENST00000530758 USP33Q8TEY7 942 aa16.45■□□□□ 0.22
BRK1-201ENST00000530758 UCMAQ8WVF2 138 aa16.45■□□□□ 0.22
BRK1-201ENST00000530758 ARHGEF2Q92974 986 aaKnown RBP16.45■□□□□ 0.22
BRK1-201ENST00000530758 ACDQ96AP0 544 aa16.45■□□□□ 0.22
BRK1-201ENST00000530758 CHRDQ9H2X0 955 aa16.45■□□□□ 0.22
BRK1-201ENST00000530758 THAP10Q9P2Z0 257 aaPredicted RBP16.45■□□□□ 0.22
BRK1-201ENST00000530758 DNAI1Q9UI46 699 aa16.45■□□□□ 0.22
BRK1-201ENST00000530758 MUC22E2RYF6 1773 aaPredicted RBP16.45■□□□□ 0.22
BRK1-201ENST00000530758 CACNA1HO95180 2353 aa16.44■□□□□ 0.22
BRK1-201ENST00000530758 A0A0D9SEW6 157 aa16.44■□□□□ 0.22
BRK1-201ENST00000530758 STK25O00506 426 aa16.44■□□□□ 0.22
BRK1-201ENST00000530758 DDX3YO15523 660 aaKnown RBP16.44■□□□□ 0.22
BRK1-201ENST00000530758 ATP5BP06576 529 aaKnown RBP16.44■□□□□ 0.22
BRK1-201ENST00000530758 DLDP09622 509 aaKnown RBP16.44■□□□□ 0.22
BRK1-201ENST00000530758 POLR2EP19388 210 aaKnown RBP16.44■□□□□ 0.22
BRK1-201ENST00000530758 CDKN2BP42772 138 aa16.44■□□□□ 0.22
BRK1-201ENST00000530758 MARCKSL1P49006 195 aa16.44■□□□□ 0.22
BRK1-201ENST00000530758 RWDD2BP57060 319 aa16.44■□□□□ 0.22
BRK1-201ENST00000530758 MMRN1Q13201 1228 aa16.44■□□□□ 0.22
BRK1-201ENST00000530758 GAS6Q14393 721 aa16.44■□□□□ 0.22
BRK1-201ENST00000530758 PAFAH1B3Q15102 231 aaKnown RBP16.44■□□□□ 0.22
BRK1-201ENST00000530758 PTPRNQ16849 979 aa16.44■□□□□ 0.22
BRK1-201ENST00000530758 PARP15Q460N3 678 aa16.44■□□□□ 0.22
BRK1-201ENST00000530758 PQLC3Q8N755 202 aa16.44■□□□□ 0.22
BRK1-201ENST00000530758 ALS2CR12Q96Q35 445 aa16.44■□□□□ 0.22
BRK1-201ENST00000530758 PSMB7Q99436 277 aa16.44■□□□□ 0.22
BRK1-201ENST00000530758 CALN1Q9BXU9 219 aa16.44■□□□□ 0.22
BRK1-201ENST00000530758 RBM12Q9NTZ6 932 aaKnown RBP16.44■□□□□ 0.22
BRK1-201ENST00000530758 ETNK2Q9NVF9 386 aa16.44■□□□□ 0.22
BRK1-201ENST00000530758 EFR3BQ9Y2G0 817 aa16.44■□□□□ 0.22
BRK1-201ENST00000530758 LRRD1A4D1F6 860 aa16.43■□□□□ 0.22
BRK1-201ENST00000530758 ANTXRLA6NF34 631 aa16.43■□□□□ 0.22
BRK1-201ENST00000530758 RAMP2O60895 175 aa16.43■□□□□ 0.22
BRK1-201ENST00000530758 ATG13O75143 517 aa16.43■□□□□ 0.22
BRK1-201ENST00000530758 RNF40O75150 1001 aa16.43■□□□□ 0.22
BRK1-201ENST00000530758 ZMPSTE24O75844 475 aa16.43■□□□□ 0.22
BRK1-201ENST00000530758 SRPRAP08240 638 aaKnown RBP16.43■□□□□ 0.22
BRK1-201ENST00000530758 PTPN7P35236 360 aa16.43■□□□□ 0.22
BRK1-201ENST00000530758 GJC1P36383 396 aa16.43■□□□□ 0.22
BRK1-201ENST00000530758 POLD3Q15054 466 aaPredicted RBP16.43■□□□□ 0.22
BRK1-201ENST00000530758 PPP2R5EQ16537 467 aa16.43■□□□□ 0.22
BRK1-201ENST00000530758 EMC10Q5UCC4 262 aa16.43■□□□□ 0.22
BRK1-201ENST00000530758 SLC9A4Q6AI14 798 aa16.43■□□□□ 0.22
BRK1-201ENST00000530758 MFSD7Q6UXD7 560 aa16.43■□□□□ 0.22
BRK1-201ENST00000530758 ARHGAP12Q8IWW6 846 aa16.43■□□□□ 0.22
BRK1-201ENST00000530758 UBL4BQ8N7F7 174 aa16.43■□□□□ 0.22
BRK1-201ENST00000530758 DCAF4L2Q8NA75 395 aa16.43■□□□□ 0.22
BRK1-201ENST00000530758 IL17RCQ8NAC3 791 aa16.43■□□□□ 0.22
BRK1-201ENST00000530758 ALG3Q92685 438 aa16.43■□□□□ 0.22
BRK1-201ENST00000530758 RNF25Q96BH1 459 aaPredicted RBP16.43■□□□□ 0.22
BRK1-201ENST00000530758 MYO19Q96H55 970 aa16.43■□□□□ 0.22
BRK1-201ENST00000530758 RBM41Q96IZ5 413 aaKnown RBP16.43■□□□□ 0.22
BRK1-201ENST00000530758 MRGPRX3Q96LB0 322 aa16.43■□□□□ 0.22
BRK1-201ENST00000530758 C2orf49Q9BVC5 232 aaPredicted RBP16.43■□□□□ 0.22
BRK1-201ENST00000530758 KLHL11Q9NVR0 708 aa16.43■□□□□ 0.22
BRK1-201ENST00000530758 NYNRINQ9P2P1 1898 aaKnown RBP16.43■□□□□ 0.22
BRK1-201ENST00000530758 CKAP5Q14008 2032 aa16.42■□□□□ 0.22
BRK1-201ENST00000530758 USP27XA6NNY8 438 aa16.42■□□□□ 0.22
BRK1-201ENST00000530758 KDELR3O43731 214 aa16.42■□□□□ 0.22
BRK1-201ENST00000530758 FTCDO95954 541 aa16.42■□□□□ 0.22
BRK1-201ENST00000530758 KRT1P04264 644 aa16.42■□□□□ 0.22
BRK1-201ENST00000530758 C7P10643 843 aa16.42■□□□□ 0.22
BRK1-201ENST00000530758 TNNT1P13805 278 aa16.42■□□□□ 0.22
BRK1-201ENST00000530758 HOXD11P31277 338 aaPredicted RBP16.42■□□□□ 0.22
BRK1-201ENST00000530758 ECT2LQ008S8 904 aa16.42■□□□□ 0.22
BRK1-201ENST00000530758 SLC20A2Q08357 652 aa16.42■□□□□ 0.22
BRK1-201ENST00000530758 SERINC3Q13530 473 aa16.42■□□□□ 0.22
BRK1-201ENST00000530758 TFDP3Q5H9I0 405 aa16.42■□□□□ 0.22
BRK1-201ENST00000530758 ZFYVE27Q5T4F4 411 aa16.42■□□□□ 0.22
BRK1-201ENST00000530758 NCBP2-AS2Q69YL0 99 aa16.42■□□□□ 0.22
BRK1-201ENST00000530758 TMCO3Q6UWJ1 677 aa16.42■□□□□ 0.22
BRK1-201ENST00000530758 SPOCD1Q6ZMY3 1216 aa16.42■□□□□ 0.22
BRK1-201ENST00000530758 TRMT11Q7Z4G4 463 aaKnown RBP16.42■□□□□ 0.22
BRK1-201ENST00000530758 SPEM1Q8N4L4 309 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms