RNA–Protein interactions for RNA: ENST00000530748.5

CTNND1-227, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,925 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-227ENST00000530748 FAM126AQ9BYI3 521 aaPredicted RBP8.62□□□□□ -1.03
CTNND1-227ENST00000530748 TNFSF13BQ9Y275 285 aa8.62□□□□□ -1.03
CTNND1-227ENST00000530748 ENO4A6NNW6 628 aa8.62□□□□□ -1.03
CTNND1-227ENST00000530748 FAM25AB3EWG3 89 aa8.62□□□□□ -1.03
CTNND1-227ENST00000530748 FAM25CB3EWG5 89 aa8.62□□□□□ -1.03
CTNND1-227ENST00000530748 FAM25GB3EWG6 89 aa8.62□□□□□ -1.03
CTNND1-227ENST00000530748 H3BQF6 201 aa8.62□□□□□ -1.03
CTNND1-227ENST00000530748 RGS5O15539 181 aa8.62□□□□□ -1.03
CTNND1-227ENST00000530748 ZBTB14O43829 449 aa8.62□□□□□ -1.03
CTNND1-227ENST00000530748 MLH1P40692 756 aa8.62□□□□□ -1.03
CTNND1-227ENST00000530748 CNTN2Q02246 1040 aa8.62□□□□□ -1.03
CTNND1-227ENST00000530748 FAAP100Q0VG06 881 aa8.62□□□□□ -1.03
CTNND1-227ENST00000530748 DOK6Q6PKX4 331 aa8.62□□□□□ -1.03
CTNND1-227ENST00000530748 AFTPHQ6ULP2 937 aa8.62□□□□□ -1.03
CTNND1-227ENST00000530748 GPSM1Q86YR5 675 aa8.62□□□□□ -1.03
CTNND1-227ENST00000530748 SLC41A1Q8IVJ1 513 aa8.62□□□□□ -1.03
CTNND1-227ENST00000530748 DPP10Q8N608 796 aa8.62□□□□□ -1.03
CTNND1-227ENST00000530748 LRRC39Q96DD0 335 aa8.62□□□□□ -1.03
CTNND1-227ENST00000530748 ANKRD27Q96NW4 1050 aa8.62□□□□□ -1.03
CTNND1-227ENST00000530748 APOL4Q9BPW4 351 aa8.62□□□□□ -1.03
CTNND1-227ENST00000530748 GLIS2Q9BZE0 524 aaPredicted RBP8.62□□□□□ -1.03
CTNND1-227ENST00000530748 ULBP1Q9BZM6 244 aa8.62□□□□□ -1.03
CTNND1-227ENST00000530748 SATB2Q9UPW6 733 aa8.62□□□□□ -1.03
CTNND1-227ENST00000530748 ASTN2O75129 1339 aaPredicted RBP8.62□□□□□ -1.03
CTNND1-227ENST00000530748 A0A088AWK7 358 aa8.62□□□□□ -1.03
CTNND1-227ENST00000530748 RECQL4O94761 1208 aa8.62□□□□□ -1.03
CTNND1-227ENST00000530748 VAPBO95292 243 aa8.62□□□□□ -1.03
CTNND1-227ENST00000530748 CLTBP09497 229 aa8.62□□□□□ -1.03
CTNND1-227ENST00000530748 ZNF10P21506 573 aaPredicted RBP8.62□□□□□ -1.03
CTNND1-227ENST00000530748 IFNGR2P38484 337 aa8.62□□□□□ -1.03
CTNND1-227ENST00000530748 ST13P50502 369 aaKnown RBP8.62□□□□□ -1.03
CTNND1-227ENST00000530748 GTF2BQ00403 316 aa8.62□□□□□ -1.03
CTNND1-227ENST00000530748 GNA13Q14344 377 aa8.62□□□□□ -1.03
CTNND1-227ENST00000530748 TSNQ15631 228 aaKnown RBP8.62□□□□□ -1.03
CTNND1-227ENST00000530748 KCNT2Q6UVM3 1135 aa8.62□□□□□ -1.03
CTNND1-227ENST00000530748 FAM180AQ6UWF9 173 aa8.62□□□□□ -1.03
CTNND1-227ENST00000530748 NECAB2Q7Z6G3 386 aa8.62□□□□□ -1.03
CTNND1-227ENST00000530748 DEFB132Q7Z7B7 95 aa8.62□□□□□ -1.03
CTNND1-227ENST00000530748 ZSWIM2Q8NEG5 633 aa8.62□□□□□ -1.03
CTNND1-227ENST00000530748 USP6NLQ92738 828 aa8.62□□□□□ -1.03
CTNND1-227ENST00000530748 SKA1Q96BD8 255 aa8.62□□□□□ -1.03
CTNND1-227ENST00000530748 MTFMTQ96DP5 389 aaKnown RBP8.62□□□□□ -1.03
CTNND1-227ENST00000530748 NSMCE2Q96MF7 247 aa8.62□□□□□ -1.03
CTNND1-227ENST00000530748 BBS4Q96RK4 519 aa8.62□□□□□ -1.03
CTNND1-227ENST00000530748 IL22Q9GZX6 179 aa8.62□□□□□ -1.03
CTNND1-227ENST00000530748 OPTCQ9UBM4 332 aa8.62□□□□□ -1.03
CTNND1-227ENST00000530748 SPTLC1O15269 473 aa8.62□□□□□ -1.03
CTNND1-227ENST00000530748 PEX1O43933 1283 aa8.62□□□□□ -1.03
CTNND1-227ENST00000530748 TBC1D12O60347 775 aa8.62□□□□□ -1.03
CTNND1-227ENST00000530748 WBP4O75554 376 aaKnown RBP8.62□□□□□ -1.03
CTNND1-227ENST00000530748 RAG1P15918 1043 aa8.62□□□□□ -1.03
CTNND1-227ENST00000530748 C4BPBP20851 252 aa8.62□□□□□ -1.03
CTNND1-227ENST00000530748 RBL1P28749 1068 aa8.62□□□□□ -1.03
CTNND1-227ENST00000530748 BEX3Q00994 111 aa8.62□□□□□ -1.03
CTNND1-227ENST00000530748 ZFP1Q6P2D0 407 aa8.62□□□□□ -1.03
CTNND1-227ENST00000530748 ZNF75CPQ92670 426 aaPredicted RBP8.62□□□□□ -1.03
CTNND1-227ENST00000530748 WNT8BQ93098 351 aa8.62□□□□□ -1.03
CTNND1-227ENST00000530748 SENP8Q96LD8 212 aa8.62□□□□□ -1.03
CTNND1-227ENST00000530748 ACO2Q99798 780 aaKnown RBP8.62□□□□□ -1.03
CTNND1-227ENST00000530748 PIH1D1Q9NWS0 290 aaKnown RBP8.62□□□□□ -1.03
CTNND1-227ENST00000530748 FAM198AQ9UFP1 575 aa8.62□□□□□ -1.03
CTNND1-227ENST00000530748 UBIAD1Q9Y5Z9 338 aa8.62□□□□□ -1.03
CTNND1-227ENST00000530748 ASTN1O14525 1302 aa8.62□□□□□ -1.03
CTNND1-227ENST00000530748 MRASO14807 208 aa8.61□□□□□ -1.03
CTNND1-227ENST00000530748 AP5Z1O43299 807 aa8.61□□□□□ -1.03
CTNND1-227ENST00000530748 ATG7O95352 703 aa8.61□□□□□ -1.03
CTNND1-227ENST00000530748 ERBB2P04626 1255 aa8.61□□□□□ -1.03
CTNND1-227ENST00000530748 TSHRP16473 764 aa8.61□□□□□ -1.03
CTNND1-227ENST00000530748 GLRA2P23416 452 aa8.61□□□□□ -1.03
CTNND1-227ENST00000530748 NEK3P51956 506 aa8.61□□□□□ -1.03
CTNND1-227ENST00000530748 ZNF143P52747 638 aaPredicted RBP8.61□□□□□ -1.03
CTNND1-227ENST00000530748 CRY1Q16526 586 aa8.61□□□□□ -1.03
CTNND1-227ENST00000530748 TCHHL1Q5QJ38 904 aaPredicted RBP8.61□□□□□ -1.03
CTNND1-227ENST00000530748 HLA-DQA1Q5Y7H0 255 aa8.61□□□□□ -1.03
CTNND1-227ENST00000530748 CES3Q6UWW8 571 aa8.61□□□□□ -1.03
CTNND1-227ENST00000530748 NPNTQ6UXI9 565 aa8.61□□□□□ -1.03
CTNND1-227ENST00000530748 PLPPR4Q7Z2D5 763 aa8.61□□□□□ -1.03
CTNND1-227ENST00000530748 ALLCQ8N6M5 410 aa8.61□□□□□ -1.03
CTNND1-227ENST00000530748 C19orf18Q8NEA5 215 aa8.61□□□□□ -1.03
CTNND1-227ENST00000530748 MRIQ9BWK5 157 aa8.61□□□□□ -1.03
CTNND1-227ENST00000530748 CXorf56Q9H5V9 222 aa8.61□□□□□ -1.03
CTNND1-227ENST00000530748 SIK3Q9Y2K2 1263 aa8.61□□□□□ -1.03
CTNND1-227ENST00000530748 TNPO3Q9Y5L0 923 aaKnown RBP8.61□□□□□ -1.03
CTNND1-227ENST00000530748 CD3EAPO15446 510 aaKnown RBP8.61□□□□□ -1.03
CTNND1-227ENST00000530748 LTA4HP09960 611 aaKnown RBP8.61□□□□□ -1.03
CTNND1-227ENST00000530748 ETS1P14921 441 aa8.61□□□□□ -1.03
CTNND1-227ENST00000530748 GPR15P49685 360 aa8.61□□□□□ -1.03
CTNND1-227ENST00000530748 SHROOM1Q2M3G4 852 aaPredicted RBP8.61□□□□□ -1.03
CTNND1-227ENST00000530748 PABPC1LQ4VXU2 614 aaKnown RBP8.61□□□□□ -1.03
CTNND1-227ENST00000530748 SYT12Q8IV01 421 aa8.61□□□□□ -1.03
CTNND1-227ENST00000530748 ZFPM1Q8IX07 1006 aa8.61□□□□□ -1.03
CTNND1-227ENST00000530748 SETD9Q8NE22 299 aa8.61□□□□□ -1.03
CTNND1-227ENST00000530748 ADAM2Q99965 735 aa8.61□□□□□ -1.03
CTNND1-227ENST00000530748 NR2E3Q9Y5X4 410 aa8.61□□□□□ -1.03
CTNND1-227ENST00000530748 SLC15A5A6NIM6 579 aa8.61□□□□□ -1.03
CTNND1-227ENST00000530748 FCHO1O14526 889 aa8.61□□□□□ -1.03
CTNND1-227ENST00000530748 NPR3P17342 541 aa8.61□□□□□ -1.03
CTNND1-227ENST00000530748 RPL14P50914 215 aaKnown RBP8.61□□□□□ -1.03
CTNND1-227ENST00000530748 IL27RAQ6UWB1 636 aa8.61□□□□□ -1.03
CTNND1-227ENST00000530748 RD3Q7Z3Z2 195 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms