RNA–Protein interactions for RNA: ENST00000530253.5

CCDC90B-217, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 2

Gene CCDC90B, Length 776 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-217ENST00000530253 IFNKQ9P0W0 207 aa9.25□□□□□ -0.93
CCDC90B-217ENST00000530253 DNAJC12Q9UKB3 198 aa9.25□□□□□ -0.93
CCDC90B-217ENST00000530253 YIPF1Q9Y548 306 aa9.25□□□□□ -0.93
CCDC90B-217ENST00000530253 WDR87Q6ZQQ6 2873 aa9.25□□□□□ -0.93
CCDC90B-217ENST00000530253 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP9.24□□□□□ -0.93
CCDC90B-217ENST00000530253 FSD2A1L4K1 749 aa9.24□□□□□ -0.93
CCDC90B-217ENST00000530253 F8VZ95 297 aa9.24□□□□□ -0.93
CCDC90B-217ENST00000530253 POU2F2P09086 479 aa9.24□□□□□ -0.93
CCDC90B-217ENST00000530253 SPATA31D3P0C874 917 aa9.24□□□□□ -0.93
CCDC90B-217ENST00000530253 PNMA6AP0CW24 399 aaPredicted RBP9.24□□□□□ -0.93
CCDC90B-217ENST00000530253 HAPLN1P10915 354 aaPredicted RBP9.24□□□□□ -0.93
CCDC90B-217ENST00000530253 KCNA5P22460 613 aa9.24□□□□□ -0.93
CCDC90B-217ENST00000530253 FPR2P25090 351 aa9.24□□□□□ -0.93
CCDC90B-217ENST00000530253 HMGA2P52926 109 aa9.24□□□□□ -0.93
CCDC90B-217ENST00000530253 CACNA2D1P54289 1103 aa9.24□□□□□ -0.93
CCDC90B-217ENST00000530253 MFAP3P55082 362 aa9.24□□□□□ -0.93
CCDC90B-217ENST00000530253 UBASH3AP57075 661 aa9.24□□□□□ -0.93
CCDC90B-217ENST00000530253 JAM2P57087 298 aa9.24□□□□□ -0.93
CCDC90B-217ENST00000530253 YWHAEP62258 255 aaKnown RBP9.24□□□□□ -0.93
CCDC90B-217ENST00000530253 ADCY1Q08828 1119 aa9.24□□□□□ -0.93
CCDC90B-217ENST00000530253 SMARCB1Q12824 385 aa9.24□□□□□ -0.93
CCDC90B-217ENST00000530253 NFE2Q16621 373 aaPredicted RBP9.24□□□□□ -0.93
CCDC90B-217ENST00000530253 CR1LQ2VPA4 569 aa9.24□□□□□ -0.93
CCDC90B-217ENST00000530253 CFAP221Q4G0U5 840 aa9.24□□□□□ -0.93
CCDC90B-217ENST00000530253 MDH1BQ5I0G3 518 aa9.24□□□□□ -0.93
CCDC90B-217ENST00000530253 ARHGAP17Q68EM7 881 aa9.24□□□□□ -0.93
CCDC90B-217ENST00000530253 ANKRD54Q6NXT1 300 aa9.24□□□□□ -0.93
CCDC90B-217ENST00000530253 SYCE2Q6PIF2 218 aa9.24□□□□□ -0.93
CCDC90B-217ENST00000530253 TMEM270Q6UE05 265 aa9.24□□□□□ -0.93
CCDC90B-217ENST00000530253 SPATA31D4Q6ZUB0 917 aa9.24□□□□□ -0.93
CCDC90B-217ENST00000530253 CEP68Q76N32 757 aa9.24□□□□□ -0.93
CCDC90B-217ENST00000530253 DCP1BQ8IZD4 617 aaKnown RBP9.24□□□□□ -0.93
CCDC90B-217ENST00000530253 FUKQ8N0W3 1084 aa9.24□□□□□ -0.93
CCDC90B-217ENST00000530253 C12orf29Q8N999 325 aa9.24□□□□□ -0.93
CCDC90B-217ENST00000530253 SPPL2BQ8TCT7 592 aa9.24□□□□□ -0.93
CCDC90B-217ENST00000530253 FRS2Q8WU20 508 aa9.24□□□□□ -0.93
CCDC90B-217ENST00000530253 C2orf15Q8WU43 125 aaKnown RBP9.24□□□□□ -0.93
CCDC90B-217ENST00000530253 DIO2Q92813 273 aa9.24□□□□□ -0.93
CCDC90B-217ENST00000530253 CASP10Q92851 521 aa9.24□□□□□ -0.93
CCDC90B-217ENST00000530253 ZNF707Q96C28 371 aaPredicted RBP9.24□□□□□ -0.93
CCDC90B-217ENST00000530253 TOE1Q96GM8 510 aaKnown RBP9.24□□□□□ -0.93
CCDC90B-217ENST00000530253 PCED1BQ96HM7 432 aa9.24□□□□□ -0.93
CCDC90B-217ENST00000530253 TMEM176AQ96HP8 235 aa9.24□□□□□ -0.93
CCDC90B-217ENST00000530253 FUBP3Q96I24 572 aaKnown RBP eCLIP9.24□□□□□ -0.93
CCDC90B-217ENST00000530253 FAM81BQ96LP2 452 aa9.24□□□□□ -0.93
CCDC90B-217ENST00000530253 ANP32EQ9BTT0 268 aa9.24□□□□□ -0.93
CCDC90B-217ENST00000530253 B3GNT5Q9BYG0 378 aa9.24□□□□□ -0.93
CCDC90B-217ENST00000530253 RHOBTB2Q9BYZ6 727 aa9.24□□□□□ -0.93
CCDC90B-217ENST00000530253 ZNF518BQ9C0D4 1074 aa9.24□□□□□ -0.93
CCDC90B-217ENST00000530253 PLEKHA4Q9H4M7 779 aa9.24□□□□□ -0.93
CCDC90B-217ENST00000530253 FAM207AQ9NSI2 230 aaPredicted RBP9.24□□□□□ -0.93
CCDC90B-217ENST00000530253 PPP4R1LQ9P1A2 415 aa9.24□□□□□ -0.93
CCDC90B-217ENST00000530253 CEP72Q9P209 647 aa9.24□□□□□ -0.93
CCDC90B-217ENST00000530253 HSFX1Q9UBD0 423 aa9.24□□□□□ -0.93
CCDC90B-217ENST00000530253 MAFFQ9ULX9 164 aa9.24□□□□□ -0.93
CCDC90B-217ENST00000530253 DAAM1Q9Y4D1 1078 aa9.24□□□□□ -0.93
CCDC90B-217ENST00000530253 INSL5Q9Y5Q6 135 aa9.24□□□□□ -0.93
CCDC90B-217ENST00000530253 PTPRDP23468 1912 aa9.24□□□□□ -0.93
CCDC90B-217ENST00000530253 H3BQ06 376 aaPredicted RBP9.23□□□□□ -0.93
CCDC90B-217ENST00000530253 O00370 1275 aa9.23□□□□□ -0.93
CCDC90B-217ENST00000530253 FOXN3O00409 490 aaPredicted RBP9.23□□□□□ -0.93
CCDC90B-217ENST00000530253 NCK2O43639 380 aa9.23□□□□□ -0.93
CCDC90B-217ENST00000530253 RFPL2O75678 378 aa9.23□□□□□ -0.93
CCDC90B-217ENST00000530253 SOAT2O75908 522 aa9.23□□□□□ -0.93
CCDC90B-217ENST00000530253 CALCAP01258 141 aa9.23□□□□□ -0.93
CCDC90B-217ENST00000530253 PAEPP09466 180 aa9.23□□□□□ -0.93
CCDC90B-217ENST00000530253 CCDC130P13994 396 aa9.23□□□□□ -0.93
CCDC90B-217ENST00000530253 ATF6P18850 670 aa9.23□□□□□ -0.93
CCDC90B-217ENST00000530253 VAMP1P23763 118 aa9.23□□□□□ -0.93
CCDC90B-217ENST00000530253 HOXA9P31269 272 aa9.23□□□□□ -0.93
CCDC90B-217ENST00000530253 MAGEA11P43364 429 aa9.23□□□□□ -0.93
CCDC90B-217ENST00000530253 DRAP1Q14919 205 aaPredicted RBP9.23□□□□□ -0.93
CCDC90B-217ENST00000530253 MAPRE1Q15691 268 aaKnown RBP9.23□□□□□ -0.93
CCDC90B-217ENST00000530253 CLUL1Q15846 466 aa9.23□□□□□ -0.93
CCDC90B-217ENST00000530253 ARHGAP44Q17R89 818 aa9.23□□□□□ -0.93
CCDC90B-217ENST00000530253 FILIP1LQ4L180 1135 aa9.23□□□□□ -0.93
CCDC90B-217ENST00000530253 FIGNQ5HY92 759 aa9.23□□□□□ -0.93
CCDC90B-217ENST00000530253 FAM71AQ8IYT1 594 aa9.23□□□□□ -0.93
CCDC90B-217ENST00000530253 ZMIZ2Q8NF64 920 aa9.23□□□□□ -0.93
CCDC90B-217ENST00000530253 CMASQ8NFW8 434 aaPredicted RBP9.23□□□□□ -0.93
CCDC90B-217ENST00000530253 SLC7A14Q8TBB6 771 aa9.23□□□□□ -0.93
CCDC90B-217ENST00000530253 TFAP2BQ92481 460 aa9.23□□□□□ -0.93
CCDC90B-217ENST00000530253 TNIP3Q96KP6 325 aa9.23□□□□□ -0.93
CCDC90B-217ENST00000530253 UHRF1Q96T88 793 aaPredicted RBP9.23□□□□□ -0.93
CCDC90B-217ENST00000530253 STK33Q9BYT3 514 aa9.23□□□□□ -0.93
CCDC90B-217ENST00000530253 KLC2Q9H0B6 622 aa9.23□□□□□ -0.93
CCDC90B-217ENST00000530253 S1PR5Q9H228 398 aa9.23□□□□□ -0.93
CCDC90B-217ENST00000530253 UBE2ZQ9H832 354 aaPredicted RBP9.23□□□□□ -0.93
CCDC90B-217ENST00000530253 ACP6Q9NPH0 428 aa9.23□□□□□ -0.93
CCDC90B-217ENST00000530253 FAM49BQ9NUQ9 324 aa9.23□□□□□ -0.93
CCDC90B-217ENST00000530253 ZDHHC7Q9NXF8 308 aa9.23□□□□□ -0.93
CCDC90B-217ENST00000530253 CLDND1Q9NY35 253 aa9.23□□□□□ -0.93
CCDC90B-217ENST00000530253 DTLQ9NZJ0 730 aa9.23□□□□□ -0.93
CCDC90B-217ENST00000530253 PCDHB4Q9Y5E5 795 aa9.23□□□□□ -0.93
CCDC90B-217ENST00000530253 ITIH6Q6UXX5 1313 aa9.23□□□□□ -0.93
CCDC90B-217ENST00000530253 CLDN5O00501 218 aa9.22□□□□□ -0.93
CCDC90B-217ENST00000530253 HGSO14964 777 aaPredicted RBP9.22□□□□□ -0.93
CCDC90B-217ENST00000530253 FZD7O75084 574 aa9.22□□□□□ -0.93
CCDC90B-217ENST00000530253 HNRNPA1P09651 372 aaKnown RBP eCLIP9.22□□□□□ -0.93
CCDC90B-217ENST00000530253 CYP2F1P24903 491 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms