RNA–Protein interactions for RNA: ENST00000529526.5

CTNND1-220, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 6,099 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-220ENST00000529526 GPSM1Q86YR5 675 aa8.26□□□□□ -1.09
CTNND1-220ENST00000529526 PCDH20Q8N6Y1 951 aaKnown RBP8.26□□□□□ -1.09
CTNND1-220ENST00000529526 PYDC1Q8WXC3 89 aa8.26□□□□□ -1.09
CTNND1-220ENST00000529526 COL3A1P02461 1466 aaPredicted RBP8.26□□□□□ -1.09
CTNND1-220ENST00000529526 VWDEQ8N2E2 1590 aa8.26□□□□□ -1.09
CTNND1-220ENST00000529526 ZNF862O60290 1169 aa8.26□□□□□ -1.09
CTNND1-220ENST00000529526 ZMPSTE24O75844 475 aa8.26□□□□□ -1.09
CTNND1-220ENST00000529526 CHKAP35790 457 aa8.26□□□□□ -1.09
CTNND1-220ENST00000529526 DDR1Q08345 913 aa8.26□□□□□ -1.09
CTNND1-220ENST00000529526 ADRM1Q16186 407 aa8.26□□□□□ -1.09
CTNND1-220ENST00000529526 SLC45A4Q5BKX6 768 aa8.26□□□□□ -1.09
CTNND1-220ENST00000529526 WASHC2DQ5SRD0 308 aa8.26□□□□□ -1.09
CTNND1-220ENST00000529526 ZNF621Q6ZSS3 439 aa8.26□□□□□ -1.09
CTNND1-220ENST00000529526 GATAD2AQ86YP4 633 aa8.26□□□□□ -1.09
CTNND1-220ENST00000529526 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.26□□□□□ -1.09
CTNND1-220ENST00000529526 BHLHE22Q8NFJ8 381 aaPredicted RBP8.26□□□□□ -1.09
CTNND1-220ENST00000529526 NDNQ99608 321 aa8.26□□□□□ -1.09
CTNND1-220ENST00000529526 FAM237BA0A1B0GVD1 139 aa8.26□□□□□ -1.09
CTNND1-220ENST00000529526 PDE2AO00408 941 aaPredicted RBP8.26□□□□□ -1.09
CTNND1-220ENST00000529526 KPNA3O00505 521 aaPredicted RBP8.26□□□□□ -1.09
CTNND1-220ENST00000529526 CYP1A2P05177 515 aa8.26□□□□□ -1.09
CTNND1-220ENST00000529526 FYNP06241 537 aa8.26□□□□□ -1.09
CTNND1-220ENST00000529526 ALADP13716 330 aa8.26□□□□□ -1.09
CTNND1-220ENST00000529526 NOS3P29474 1203 aa8.26□□□□□ -1.09
CTNND1-220ENST00000529526 MARCKSL1P49006 195 aa8.26□□□□□ -1.09
CTNND1-220ENST00000529526 SFSWAPQ12872 951 aaKnown RBP8.26□□□□□ -1.09
CTNND1-220ENST00000529526 PFKFB4Q16877 469 aa8.26□□□□□ -1.09
CTNND1-220ENST00000529526 PARP6Q2NL67 630 aa8.26□□□□□ -1.09
CTNND1-220ENST00000529526 ARMC12Q5T9G4 340 aa8.26□□□□□ -1.09
CTNND1-220ENST00000529526 SNX30Q5VWJ9 437 aa8.26□□□□□ -1.09
CTNND1-220ENST00000529526 PRMT9Q6P2P2 845 aa8.26□□□□□ -1.09
CTNND1-220ENST00000529526 LRRC74BQ6ZQY2 392 aa8.26□□□□□ -1.09
CTNND1-220ENST00000529526 EPHX4Q8IUS5 362 aa8.26□□□□□ -1.09
CTNND1-220ENST00000529526 SPATA6LQ8N4H0 392 aa8.26□□□□□ -1.09
CTNND1-220ENST00000529526 MIEF2Q96C03 454 aa8.26□□□□□ -1.09
CTNND1-220ENST00000529526 MPP4Q96JB8 637 aa8.26□□□□□ -1.09
CTNND1-220ENST00000529526 C6orf62Q9GZU0 229 aaPredicted RBP8.26□□□□□ -1.09
CTNND1-220ENST00000529526 ABCC13Q9NSE7 274 aa8.26□□□□□ -1.09
CTNND1-220ENST00000529526 AMHP03971 560 aa8.25□□□□□ -1.09
CTNND1-220ENST00000529526 RPLP2P05387 115 aaKnown RBP8.25□□□□□ -1.09
CTNND1-220ENST00000529526 SMIM10L2AP0DMW4 78 aa8.25□□□□□ -1.09
CTNND1-220ENST00000529526 SMIM10L2BP0DMW5 78 aa8.25□□□□□ -1.09
CTNND1-220ENST00000529526 PPP2R1BP30154 601 aa8.25□□□□□ -1.09
CTNND1-220ENST00000529526 CRY1Q16526 586 aa8.25□□□□□ -1.09
CTNND1-220ENST00000529526 CYP20A1Q6UW02 462 aa8.25□□□□□ -1.09
CTNND1-220ENST00000529526 POLNQ7Z5Q5 900 aa8.25□□□□□ -1.09
CTNND1-220ENST00000529526 SH3RF1Q7Z6J0 888 aa8.25□□□□□ -1.09
CTNND1-220ENST00000529526 TMEM132CQ8N3T6 1108 aa8.25□□□□□ -1.09
CTNND1-220ENST00000529526 VGLL2Q8N8G2 317 aa8.25□□□□□ -1.09
CTNND1-220ENST00000529526 DCUN1D5Q9BTE7 237 aa8.25□□□□□ -1.09
CTNND1-220ENST00000529526 KLHL25Q9H0H3 589 aa8.25□□□□□ -1.09
CTNND1-220ENST00000529526 BCL9O00512 1426 aa8.25□□□□□ -1.09
CTNND1-220ENST00000529526 RCCD1A6NED2 376 aa8.25□□□□□ -1.09
CTNND1-220ENST00000529526 MEIS2O14770 477 aa8.25□□□□□ -1.09
CTNND1-220ENST00000529526 LIASO43766 372 aa8.25□□□□□ -1.09
CTNND1-220ENST00000529526 TSPAN8P19075 237 aa8.25□□□□□ -1.09
CTNND1-220ENST00000529526 KRT20P35900 424 aa8.25□□□□□ -1.09
CTNND1-220ENST00000529526 RAD23AP54725 363 aa8.25□□□□□ -1.09
CTNND1-220ENST00000529526 ARMCX4Q5H9R4 360 aa8.25□□□□□ -1.09
CTNND1-220ENST00000529526 SDHAF4Q5VUM1 108 aa8.25□□□□□ -1.09
CTNND1-220ENST00000529526 FAM45BPQ6NSW5 357 aa8.25□□□□□ -1.09
CTNND1-220ENST00000529526 STK32CQ86UX6 486 aa8.25□□□□□ -1.09
CTNND1-220ENST00000529526 SYT12Q8IV01 421 aa8.25□□□□□ -1.09
CTNND1-220ENST00000529526 PSTKQ8IV42 348 aaKnown RBP8.25□□□□□ -1.09
CTNND1-220ENST00000529526 CYP4Z2PQ8N1L4 340 aa8.25□□□□□ -1.09
CTNND1-220ENST00000529526 DPP10Q8N608 796 aa8.25□□□□□ -1.09
CTNND1-220ENST00000529526 LZTR1Q8N653 840 aa8.25□□□□□ -1.09
CTNND1-220ENST00000529526 MCOLN3Q8TDD5 553 aa8.25□□□□□ -1.09
CTNND1-220ENST00000529526 BBS4Q96RK4 519 aa8.25□□□□□ -1.09
CTNND1-220ENST00000529526 POLR1EQ9GZS1 481 aaKnown RBP8.25□□□□□ -1.09
CTNND1-220ENST00000529526 HDHD2Q9H0R4 259 aa8.25□□□□□ -1.09
CTNND1-220ENST00000529526 MARCH2Q9P0N8 246 aa8.25□□□□□ -1.09
CTNND1-220ENST00000529526 NDOR1Q9UHB4 597 aa8.25□□□□□ -1.09
CTNND1-220ENST00000529526 FBXO10Q9UK96 956 aa8.25□□□□□ -1.09
CTNND1-220ENST00000529526 KIDINS220Q9ULH0 1771 aa8.25□□□□□ -1.09
CTNND1-220ENST00000529526 SIGLEC16A6NMB1 481 aa8.25□□□□□ -1.09
CTNND1-220ENST00000529526 PTGES3LE9PB15 166 aa8.25□□□□□ -1.09
CTNND1-220ENST00000529526 H3BN98 237 aa8.25□□□□□ -1.09
CTNND1-220ENST00000529526 CYP2A6P11509 494 aaPredicted RBP8.25□□□□□ -1.09
CTNND1-220ENST00000529526 CDC25CP30307 473 aa8.25□□□□□ -1.09
CTNND1-220ENST00000529526 ABL2P42684 1182 aa8.25□□□□□ -1.09
CTNND1-220ENST00000529526 GUCA1AP43080 201 aaPredicted RBP8.25□□□□□ -1.09
CTNND1-220ENST00000529526 ATP1A4Q13733 1029 aa8.25□□□□□ -1.09
CTNND1-220ENST00000529526 SETMARQ53H47 684 aaPredicted RBP8.25□□□□□ -1.09
CTNND1-220ENST00000529526 SCARA3Q6AZY7 606 aa8.25□□□□□ -1.09
CTNND1-220ENST00000529526 CASP12Q6UXS9 341 aa8.25□□□□□ -1.09
CTNND1-220ENST00000529526 EFCAB3Q8N7B9 438 aa8.25□□□□□ -1.09
CTNND1-220ENST00000529526 USP7Q93009 1102 aa8.25□□□□□ -1.09
CTNND1-220ENST00000529526 WNT8BQ93098 351 aa8.25□□□□□ -1.09
CTNND1-220ENST00000529526 FAM84AQ96KN4 292 aa8.25□□□□□ -1.09
CTNND1-220ENST00000529526 TMEM134Q9H6X4 195 aa8.25□□□□□ -1.09
CTNND1-220ENST00000529526 KLHL1Q9NR64 748 aa8.25□□□□□ -1.09
CTNND1-220ENST00000529526 THG1LQ9NWX6 298 aaKnown RBP8.25□□□□□ -1.09
CTNND1-220ENST00000529526 ARL15Q9NXU5 204 aa8.25□□□□□ -1.09
CTNND1-220ENST00000529526 AHSPQ9NZD4 102 aa8.25□□□□□ -1.09
CTNND1-220ENST00000529526 BTBD7Q9P203 1132 aa8.25□□□□□ -1.09
CTNND1-220ENST00000529526 OPTCQ9UBM4 332 aa8.25□□□□□ -1.09
CTNND1-220ENST00000529526 PRKAG3Q9UGI9 489 aa8.25□□□□□ -1.09
CTNND1-220ENST00000529526 PACSIN3Q9UKS6 424 aa8.25□□□□□ -1.09
CTNND1-220ENST00000529526 MANSC4A6NHS7 340 aaPredicted RBP8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms