RNA–Protein interactions for RNA: ENST00000528494.5

ATG13-211, Transcript of autophagy related 13, humanhuman

TSL 1 (best) BASIC

Gene ATG13, Length 2,351 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG13-211ENST00000528494 F5H423 210 aaPredicted RBP13.09□□□□□ -0.31
ATG13-211ENST00000528494 PAGE1O75459 146 aa13.09□□□□□ -0.31
ATG13-211ENST00000528494 AGTP01019 485 aa13.09□□□□□ -0.31
ATG13-211ENST00000528494 IGLV3-25P01717 112 aa13.09□□□□□ -0.31
ATG13-211ENST00000528494 URODP06132 367 aa13.09□□□□□ -0.31
ATG13-211ENST00000528494 CCDC166P0CW27 439 aa13.09□□□□□ -0.31
ATG13-211ENST00000528494 STIP1P31948 543 aaKnown RBP13.09□□□□□ -0.31
ATG13-211ENST00000528494 CCR1P32246 355 aa13.09□□□□□ -0.31
ATG13-211ENST00000528494 SCAPQ12770 1279 aa13.09□□□□□ -0.31
ATG13-211ENST00000528494 SMARCB1Q12824 385 aa13.09□□□□□ -0.31
ATG13-211ENST00000528494 DPYSQ14117 519 aa13.09□□□□□ -0.31
ATG13-211ENST00000528494 SH2D4BQ5SQS7 431 aa13.09□□□□□ -0.31
ATG13-211ENST00000528494 C10orf120Q5SQS8 335 aa13.09□□□□□ -0.31
ATG13-211ENST00000528494 FAXCQ5TGI0 409 aa13.09□□□□□ -0.31
ATG13-211ENST00000528494 CCNJLQ8IV13 435 aa13.09□□□□□ -0.31
ATG13-211ENST00000528494 AGGF1Q8N302 714 aaeCLIP13.09□□□□□ -0.315e-10■□□□□ 10.4
ATG13-211ENST00000528494 CCNYQ8ND76 341 aa13.09□□□□□ -0.31
ATG13-211ENST00000528494 CCDC110Q8TBZ0 833 aa13.09□□□□□ -0.31
ATG13-211ENST00000528494 CEP41Q9BYV8 373 aa13.09□□□□□ -0.31
ATG13-211ENST00000528494 TXLNGYQ9BZA5 131 aa13.09□□□□□ -0.31
ATG13-211ENST00000528494 CCSER2Q9H7U1 834 aa13.09□□□□□ -0.31
ATG13-211ENST00000528494 TCRBV7S3A2A0A539 114 aa13.09□□□□□ -0.31
ATG13-211ENST00000528494 ZNF487B1APH4 448 aa13.09□□□□□ -0.31
ATG13-211ENST00000528494 ATP5HO75947 161 aa13.09□□□□□ -0.31
ATG13-211ENST00000528494 FGF18O76093 207 aa13.09□□□□□ -0.31
ATG13-211ENST00000528494 ACSL3O95573 720 aa13.09□□□□□ -0.31
ATG13-211ENST00000528494 LMNAP02545 664 aaKnown RBP13.09□□□□□ -0.31
ATG13-211ENST00000528494 NUDT17P0C025 328 aa13.09□□□□□ -0.31
ATG13-211ENST00000528494 GM2AP17900 193 aa13.09□□□□□ -0.31
ATG13-211ENST00000528494 AIF1P55008 147 aa13.09□□□□□ -0.31
ATG13-211ENST00000528494 SH3BGRP55822 239 aaPredicted RBP13.09□□□□□ -0.31
ATG13-211ENST00000528494 IFI35P80217 286 aaPredicted RBP13.09□□□□□ -0.31
ATG13-211ENST00000528494 AP1B1Q10567 949 aa13.09□□□□□ -0.31
ATG13-211ENST00000528494 PPIGQ13427 754 aaKnown RBP eCLIP13.09□□□□□ -0.31
ATG13-211ENST00000528494 EIF4EBP2Q13542 120 aaPredicted RBP13.09□□□□□ -0.31
ATG13-211ENST00000528494 SLC29A2Q14542 456 aa13.09□□□□□ -0.31
ATG13-211ENST00000528494 CNPY1Q3B7I2 92 aa13.09□□□□□ -0.31
ATG13-211ENST00000528494 C6orf118Q5T5N4 469 aa13.09□□□□□ -0.31
ATG13-211ENST00000528494 ANKRD22Q5VYY1 191 aa13.09□□□□□ -0.31
ATG13-211ENST00000528494 ARMCX6Q7L4S7 300 aa13.09□□□□□ -0.31
ATG13-211ENST00000528494 FIBCD1Q8N539 461 aa13.09□□□□□ -0.31
ATG13-211ENST00000528494 C2orf15Q8WU43 125 aaKnown RBP13.09□□□□□ -0.31
ATG13-211ENST00000528494 SPATA17Q96L03 361 aa13.09□□□□□ -0.31
ATG13-211ENST00000528494 ZNF512Q96ME7 567 aaPredicted RBP13.09□□□□□ -0.31
ATG13-211ENST00000528494 OXCT2Q9BYC2 517 aaPredicted RBP13.09□□□□□ -0.31
ATG13-211ENST00000528494 TLR8Q9NR97 1041 aaKnown RBP13.09□□□□□ -0.31
ATG13-211ENST00000528494 IL37Q9NZH6 218 aa13.09□□□□□ -0.31
ATG13-211ENST00000528494 RCOR3Q9P2K3 495 aaPredicted RBP13.09□□□□□ -0.31
ATG13-211ENST00000528494 PCDHB12Q9Y5F1 795 aa13.09□□□□□ -0.31
ATG13-211ENST00000528494 LCHNA4D1U4 455 aa13.08□□□□□ -0.32
ATG13-211ENST00000528494 TCP11X1B4DZS4 312 aa13.08□□□□□ -0.32
ATG13-211ENST00000528494 H0Y3Z8 333 aa13.08□□□□□ -0.32
ATG13-211ENST00000528494 VHLP40337 213 aa13.08□□□□□ -0.32
ATG13-211ENST00000528494 NR2C2P49116 596 aa13.08□□□□□ -0.32
ATG13-211ENST00000528494 TUFMP49411 452 aaKnown RBP13.08□□□□□ -0.32
ATG13-211ENST00000528494 SEMA3BQ13214 749 aa13.08□□□□□ -0.32
ATG13-211ENST00000528494 WASHC2DQ5SRD0 308 aa13.08□□□□□ -0.32
ATG13-211ENST00000528494 TMEM240Q5SV17 173 aa13.08□□□□□ -0.32
ATG13-211ENST00000528494 BEND5Q7L4P6 421 aa13.08□□□□□ -0.32
ATG13-211ENST00000528494 DDX53Q86TM3 631 aaKnown RBP13.08□□□□□ -0.32
ATG13-211ENST00000528494 BBOF1Q8ND07 529 aa13.08□□□□□ -0.32
ATG13-211ENST00000528494 FAM13CQ8NE31 585 aa13.08□□□□□ -0.32
ATG13-211ENST00000528494 FCRL2Q96LA5 508 aaPredicted RBP13.08□□□□□ -0.32
ATG13-211ENST00000528494 EPB41L4BQ9H329 900 aa13.08□□□□□ -0.32
ATG13-211ENST00000528494 DCLRE1BQ9H816 532 aa13.08□□□□□ -0.32
ATG13-211ENST00000528494 PRDM16Q9HAZ2 1276 aa13.08□□□□□ -0.32
ATG13-211ENST00000528494 MRPL17Q9NRX2 175 aaKnown RBP13.08□□□□□ -0.32
ATG13-211ENST00000528494 NMRK1Q9NWW6 199 aa13.08□□□□□ -0.32
ATG13-211ENST00000528494 SEPT10Q9P0V9 454 aa13.08□□□□□ -0.32
ATG13-211ENST00000528494 STOML1Q9UBI4 398 aa13.08□□□□□ -0.32
ATG13-211ENST00000528494 AFF4Q9UHB7 1163 aaKnown RBP13.08□□□□□ -0.32
ATG13-211ENST00000528494 CIDEBQ9UHD4 219 aa13.08□□□□□ -0.32
ATG13-211ENST00000528494 PRRG1O14668 218 aa13.08□□□□□ -0.32
ATG13-211ENST00000528494 DCLK1O15075 740 aa13.08□□□□□ -0.32
ATG13-211ENST00000528494 BANF1O75531 89 aa13.08□□□□□ -0.32
ATG13-211ENST00000528494 ZNF189O75820 626 aaPredicted RBP13.08□□□□□ -0.32
ATG13-211ENST00000528494 KYNUQ16719 465 aa13.08□□□□□ -0.32
ATG13-211ENST00000528494 RNASEH2BQ5TBB1 312 aaKnown RBP13.08□□□□□ -0.32
ATG13-211ENST00000528494 CROCCP2Q86T23 111 aa13.08□□□□□ -0.32
ATG13-211ENST00000528494 NPWQ8N729 165 aa13.08□□□□□ -0.32
ATG13-211ENST00000528494 CPT1BQ92523 772 aa13.08□□□□□ -0.32
ATG13-211ENST00000528494 CELF6Q96J87 481 aaKnown RBP13.08□□□□□ -0.32
ATG13-211ENST00000528494 C9orf72Q96LT7 481 aa13.08□□□□□ -0.32
ATG13-211ENST00000528494 SERPINB11Q96P15 392 aa13.08□□□□□ -0.32
ATG13-211ENST00000528494 RBM15Q96T37 977 aaKnown RBP eCLIP13.08□□□□□ -0.321e-7■■□□□ 14.4
ATG13-211ENST00000528494 SPATA16Q9BXB7 569 aa13.08□□□□□ -0.32
ATG13-211ENST00000528494 STMN4Q9H169 189 aaPredicted RBP13.08□□□□□ -0.32
ATG13-211ENST00000528494 LRMDAQ9H2I8 198 aa13.08□□□□□ -0.32
ATG13-211ENST00000528494 PABPC3Q9H361 631 aaKnown RBP13.08□□□□□ -0.32
ATG13-211ENST00000528494 RAB6BQ9NRW1 208 aa13.08□□□□□ -0.32
ATG13-211ENST00000528494 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.08□□□□□ -0.32
ATG13-211ENST00000528494 RHBDL2Q9NX52 303 aa13.08□□□□□ -0.32
ATG13-211ENST00000528494 ARHGEF38Q9NXL2 777 aa13.08□□□□□ -0.32
ATG13-211ENST00000528494 KLHL14Q9P2G3 628 aa13.08□□□□□ -0.32
ATG13-211ENST00000528494 PRKAG3Q9UGI9 489 aa13.08□□□□□ -0.32
ATG13-211ENST00000528494 FAM92AA1XBS5 289 aa13.07□□□□□ -0.32
ATG13-211ENST00000528494 SMIM23A6NLE4 172 aa13.07□□□□□ -0.32
ATG13-211ENST00000528494 TEX28O15482 410 aa13.07□□□□□ -0.32
ATG13-211ENST00000528494 ABLIM3O94929 683 aa13.07□□□□□ -0.32
ATG13-211ENST00000528494 TBX4P57082 545 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms