RNA–Protein interactions for RNA: ENST00000528149.5

CCDC90B-210, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 987 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-210ENST00000528149 C11orf63Q6NUN7 778 aa11.91□□□□□ -0.5
CCDC90B-210ENST00000528149 C14orf80Q86SX3 495 aa11.91□□□□□ -0.5
CCDC90B-210ENST00000528149 CIR1Q86X95 450 aaPredicted RBP11.91□□□□□ -0.5
CCDC90B-210ENST00000528149 ETFBKMTQ8IXQ9 262 aa11.91□□□□□ -0.5
CCDC90B-210ENST00000528149 PYROXD2Q8N2H3 581 aa11.91□□□□□ -0.5
CCDC90B-210ENST00000528149 CPXM2Q8N436 756 aa11.91□□□□□ -0.5
CCDC90B-210ENST00000528149 KIAA1958Q8N8K9 716 aa11.91□□□□□ -0.5
CCDC90B-210ENST00000528149 CD101Q93033 1021 aa11.91□□□□□ -0.5
CCDC90B-210ENST00000528149 NTAN1Q96AB6 310 aa11.91□□□□□ -0.5
CCDC90B-210ENST00000528149 OTUB2Q96DC9 234 aa11.91□□□□□ -0.5
CCDC90B-210ENST00000528149 PRMT1Q99873 361 aaKnown RBP11.91□□□□□ -0.5
CCDC90B-210ENST00000528149 DUSP15Q9H1R2 295 aaPredicted RBP11.91□□□□□ -0.5
CCDC90B-210ENST00000528149 C8orf33Q9H7E9 229 aaPredicted RBP11.91□□□□□ -0.5
CCDC90B-210ENST00000528149 TMEM9BQ9NQ34 198 aa11.91□□□□□ -0.5
CCDC90B-210ENST00000528149 SPHK2Q9NRA0 654 aa11.91□□□□□ -0.5
CCDC90B-210ENST00000528149 KLHL11Q9NVR0 708 aa11.91□□□□□ -0.5
CCDC90B-210ENST00000528149 CACNA2D2Q9NY47 1150 aa11.91□□□□□ -0.5
CCDC90B-210ENST00000528149 SLC12A6Q9UHW9 1150 aa11.91□□□□□ -0.5
CCDC90B-210ENST00000528149 FZD10Q9ULW2 581 aa11.91□□□□□ -0.5
CCDC90B-210ENST00000528149 AP4E1Q9UPM8 1137 aa11.91□□□□□ -0.5
CCDC90B-210ENST00000528149 CAPN6Q9Y6Q1 641 aa11.91□□□□□ -0.5
CCDC90B-210ENST00000528149 HECTD1Q9ULT8 2610 aa11.91□□□□□ -0.5
CCDC90B-210ENST00000528149 MUC22E2RYF6 1773 aaPredicted RBP11.91□□□□□ -0.5
CCDC90B-210ENST00000528149 MYO18BQ8IUG5 2567 aa11.9□□□□□ -0.5
CCDC90B-210ENST00000528149 USP27XA6NNY8 438 aa11.9□□□□□ -0.5
CCDC90B-210ENST00000528149 PRRT4C9JH25 899 aa11.9□□□□□ -0.5
CCDC90B-210ENST00000528149 F5H5T6 163 aa11.9□□□□□ -0.5
CCDC90B-210ENST00000528149 GFRA2O00451 464 aa11.9□□□□□ -0.5
CCDC90B-210ENST00000528149 CDX4O14627 284 aaPredicted RBP11.9□□□□□ -0.5
CCDC90B-210ENST00000528149 KRT86O43790 486 aa11.9□□□□□ -0.5
CCDC90B-210ENST00000528149 SPOPO43791 374 aa11.9□□□□□ -0.5
CCDC90B-210ENST00000528149 TULP3O75386 442 aa11.9□□□□□ -0.5
CCDC90B-210ENST00000528149 ADH1CP00326 375 aa11.9□□□□□ -0.5
CCDC90B-210ENST00000528149 COMTP21964 271 aa11.9□□□□□ -0.5
CCDC90B-210ENST00000528149 PCK1P35558 622 aa11.9□□□□□ -0.5
CCDC90B-210ENST00000528149 RPS24P62847 133 aaKnown RBP11.9□□□□□ -0.5
CCDC90B-210ENST00000528149 SCAPQ12770 1279 aa11.9□□□□□ -0.5
CCDC90B-210ENST00000528149 AUHQ13825 339 aaKnown RBP11.9□□□□□ -0.5
CCDC90B-210ENST00000528149 ARL13BQ3SXY8 428 aa11.9□□□□□ -0.5
CCDC90B-210ENST00000528149 EFHC2Q5JST6 749 aa11.9□□□□□ -0.5
CCDC90B-210ENST00000528149 FYB2Q5VWT5 728 aa11.9□□□□□ -0.5
CCDC90B-210ENST00000528149 SLFN11Q7Z7L1 901 aa11.9□□□□□ -0.5
CCDC90B-210ENST00000528149 DAAM2Q86T65 1068 aa11.9□□□□□ -0.5
CCDC90B-210ENST00000528149 CFAP52Q8N1V2 620 aa11.9□□□□□ -0.5
CCDC90B-210ENST00000528149 CCDC33Q8N5R6 958 aa11.9□□□□□ -0.5
CCDC90B-210ENST00000528149 RPLP0P6Q8NHW5 317 aa11.9□□□□□ -0.5
CCDC90B-210ENST00000528149 HSPH1Q92598 858 aa11.9□□□□□ -0.5
CCDC90B-210ENST00000528149 AZIN2Q96A70 460 aa11.9□□□□□ -0.5
CCDC90B-210ENST00000528149 MSANTD3Q96H12 275 aa11.9□□□□□ -0.5
CCDC90B-210ENST00000528149 HHIPQ96QV1 700 aa11.9□□□□□ -0.5
CCDC90B-210ENST00000528149 ACOX2Q99424 681 aa11.9□□□□□ -0.5
CCDC90B-210ENST00000528149 DDX50Q9BQ39 737 aaKnown RBP11.9□□□□□ -0.5
CCDC90B-210ENST00000528149 BBS2Q9BXC9 721 aa11.9□□□□□ -0.5
CCDC90B-210ENST00000528149 DHX35Q9H5Z1 703 aaKnown RBP11.9□□□□□ -0.5
CCDC90B-210ENST00000528149 TRMT1Q9NXH9 659 aaKnown RBP11.9□□□□□ -0.5
CCDC90B-210ENST00000528149 LCMT1Q9UIC8 334 aa11.9□□□□□ -0.5
CCDC90B-210ENST00000528149 STOML2Q9UJZ1 356 aa11.9□□□□□ -0.5
CCDC90B-210ENST00000528149 VANGL2Q9ULK5 521 aa11.9□□□□□ -0.5
CCDC90B-210ENST00000528149 ZNF462Q96JM2 2506 aa11.9□□□□□ -0.5
CCDC90B-210ENST00000528149 ABCA7Q8IZY2 2146 aa11.89□□□□□ -0.51
CCDC90B-210ENST00000528149 CCDC163A0A0D9SF12 145 aa11.89□□□□□ -0.51
CCDC90B-210ENST00000528149 SPAARA0A1B0GVQ0 90 aa11.89□□□□□ -0.51
CCDC90B-210ENST00000528149 BCLAF3A2AJT9 711 aaKnown RBP11.89□□□□□ -0.51
CCDC90B-210ENST00000528149 FAM72CH0Y354 149 aa11.89□□□□□ -0.51
CCDC90B-210ENST00000528149 HOXC11O43248 304 aaPredicted RBP11.89□□□□□ -0.51
CCDC90B-210ENST00000528149 TBL1XO60907 577 aa11.89□□□□□ -0.51
CCDC90B-210ENST00000528149 PALMO75781 387 aa11.89□□□□□ -0.51
CCDC90B-210ENST00000528149 FTCDO95954 541 aa11.89□□□□□ -0.51
CCDC90B-210ENST00000528149 TYRP14679 529 aa11.89□□□□□ -0.51
CCDC90B-210ENST00000528149 HOXD9P28356 352 aaPredicted RBP11.89□□□□□ -0.51
CCDC90B-210ENST00000528149 CHKAP35790 457 aa11.89□□□□□ -0.51
CCDC90B-210ENST00000528149 MARCKSL1P49006 195 aa11.89□□□□□ -0.51
CCDC90B-210ENST00000528149 MLLT6P55198 1093 aaPredicted RBP11.89□□□□□ -0.51
CCDC90B-210ENST00000528149 GEN1Q17RS7 908 aa11.89□□□□□ -0.51
CCDC90B-210ENST00000528149 UAP1L1Q3KQV9 507 aa11.89□□□□□ -0.51
CCDC90B-210ENST00000528149 ATP13A4Q4VNC1 1196 aa11.89□□□□□ -0.51
CCDC90B-210ENST00000528149 C2orf27AQ580R0 203 aa11.89□□□□□ -0.51
CCDC90B-210ENST00000528149 KCNT1Q5JUK3 1230 aa11.89□□□□□ -0.51
CCDC90B-210ENST00000528149 ARTNQ5T4W7 220 aa11.89□□□□□ -0.51
CCDC90B-210ENST00000528149 ERMARDQ5T6L9 678 aa11.89□□□□□ -0.51
CCDC90B-210ENST00000528149 FAM72AQ5TYM5 149 aa11.89□□□□□ -0.51
CCDC90B-210ENST00000528149 EGFLAMQ63HQ2 1017 aa11.89□□□□□ -0.51
CCDC90B-210ENST00000528149 FAM72DQ6L9T8 149 aa11.89□□□□□ -0.51
CCDC90B-210ENST00000528149 FBXL22Q6P050 247 aa11.89□□□□□ -0.51
CCDC90B-210ENST00000528149 C1orf228Q6PIY5 440 aa11.89□□□□□ -0.51
CCDC90B-210ENST00000528149 FAM72BQ86X60 149 aa11.89□□□□□ -0.51
CCDC90B-210ENST00000528149 ZNF683Q8IZ20 524 aa11.89□□□□□ -0.51
CCDC90B-210ENST00000528149 LRRC57Q8N9N7 239 aa11.89□□□□□ -0.51
CCDC90B-210ENST00000528149 HJURPQ8NCD3 748 aaPredicted RBP11.89□□□□□ -0.51
CCDC90B-210ENST00000528149 DDI1Q8WTU0 396 aa11.89□□□□□ -0.51
CCDC90B-210ENST00000528149 SORCS1Q8WY21 1168 aa11.89□□□□□ -0.51
CCDC90B-210ENST00000528149 IGSF8Q969P0 613 aa11.89□□□□□ -0.51
CCDC90B-210ENST00000528149 RPRD1AQ96P16 312 aaPredicted RBP11.89□□□□□ -0.51
CCDC90B-210ENST00000528149 HAPLN3Q96S86 360 aa11.89□□□□□ -0.51
CCDC90B-210ENST00000528149 KCTD15Q96SI1 283 aaPredicted RBP11.89□□□□□ -0.51
CCDC90B-210ENST00000528149 NCAPGQ9BPX3 1015 aa11.89□□□□□ -0.51
CCDC90B-210ENST00000528149 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.89□□□□□ -0.51
CCDC90B-210ENST00000528149 DNAJC17Q9NVM6 304 aaKnown RBP11.89□□□□□ -0.51
CCDC90B-210ENST00000528149 TMEM51Q9NW97 253 aa11.89□□□□□ -0.51
CCDC90B-210ENST00000528149 STIM2Q9P246 746 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms