RNA–Protein interactions for RNA: ENST00000527881.1

TSKU-203, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSKU, Length 3,554 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-203ENST00000527881 NAPRTQ6XQN6 538 aa12.73□□□□□ -0.37
TSKU-203ENST00000527881 Q8N9G6 341 aaPredicted RBP12.73□□□□□ -0.37
TSKU-203ENST00000527881 TSNARE1Q96NA8 513 aa12.73□□□□□ -0.37
TSKU-203ENST00000527881 SMARCAD1Q9H4L7 1026 aa12.73□□□□□ -0.37
TSKU-203ENST00000527881 NXF1Q9UBU9 619 aaKnown RBP12.73□□□□□ -0.37
TSKU-203ENST00000527881 ZNF335Q9H4Z2 1342 aaPredicted RBP12.73□□□□□ -0.37
TSKU-203ENST00000527881 ZNFX1Q9P2E3 1918 aaKnown RBP12.73□□□□□ -0.37
TSKU-203ENST00000527881 TOR1BO14657 336 aa12.73□□□□□ -0.37
TSKU-203ENST00000527881 SNAP91O60641 907 aa12.73□□□□□ -0.37
TSKU-203ENST00000527881 TRIM13O60858 407 aa12.73□□□□□ -0.37
TSKU-203ENST00000527881 PIGNO95427 931 aa12.73□□□□□ -0.37
TSKU-203ENST00000527881 C1QAP02745 245 aa12.73□□□□□ -0.37
TSKU-203ENST00000527881 NME5P56597 212 aa12.73□□□□□ -0.37
TSKU-203ENST00000527881 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.73□□□□□ -0.37
TSKU-203ENST00000527881 ACMSDQ8TDX5 336 aa12.73□□□□□ -0.37
TSKU-203ENST00000527881 CLIP3Q96DZ5 547 aa12.73□□□□□ -0.37
TSKU-203ENST00000527881 CGREF1Q99674 301 aa12.73□□□□□ -0.37
TSKU-203ENST00000527881 MXRA8Q9BRK3 442 aa12.73□□□□□ -0.37
TSKU-203ENST00000527881 RAD21L1Q9H4I0 556 aa12.73□□□□□ -0.37
TSKU-203ENST00000527881 NYAP2Q9P242 653 aa12.73□□□□□ -0.37
TSKU-203ENST00000527881 PI4KBQ9UBF8 816 aa12.73□□□□□ -0.37
TSKU-203ENST00000527881 AGO2Q9UKV8 859 aaKnown RBP12.73□□□□□ -0.37
TSKU-203ENST00000527881 PCDHA11Q9Y5I1 949 aa12.73□□□□□ -0.37
TSKU-203ENST00000527881 E7ENX8 843 aa12.72□□□□□ -0.37
TSKU-203ENST00000527881 ACOT8O14734 319 aa12.72□□□□□ -0.37
TSKU-203ENST00000527881 CLPXO76031 633 aa12.72□□□□□ -0.37
TSKU-203ENST00000527881 CHEK2O96017 543 aa12.72□□□□□ -0.37
TSKU-203ENST00000527881 ERVK-10P10266 1014 aa12.72□□□□□ -0.37
TSKU-203ENST00000527881 FSTL1Q12841 308 aa12.72□□□□□ -0.37
TSKU-203ENST00000527881 ORC1Q13415 861 aa12.72□□□□□ -0.37
TSKU-203ENST00000527881 GRAPQ13588 217 aa12.72□□□□□ -0.37
TSKU-203ENST00000527881 PRPSAP1Q14558 356 aa12.72□□□□□ -0.37
TSKU-203ENST00000527881 UGCGQ16739 394 aa12.72□□□□□ -0.37
TSKU-203ENST00000527881 CLPPQ16740 277 aaPredicted RBP12.72□□□□□ -0.37
TSKU-203ENST00000527881 ANO4Q32M45 955 aa12.72□□□□□ -0.37
TSKU-203ENST00000527881 TBCELQ5QJ74 424 aa12.72□□□□□ -0.37
TSKU-203ENST00000527881 MCF2L2Q86YR7 1114 aa12.72□□□□□ -0.37
TSKU-203ENST00000527881 SNX31Q8N9S9 440 aa12.72□□□□□ -0.37
TSKU-203ENST00000527881 GRAPLQ8TC17 118 aaPredicted RBP12.72□□□□□ -0.37
TSKU-203ENST00000527881 ASB9Q96DX5 294 aa12.72□□□□□ -0.37
TSKU-203ENST00000527881 RIT2Q99578 217 aa12.72□□□□□ -0.37
TSKU-203ENST00000527881 PCDHGC3Q9UN70 934 aa12.72□□□□□ -0.37
TSKU-203ENST00000527881 CPQQ9Y646 472 aa12.72□□□□□ -0.37
TSKU-203ENST00000527881 PRPSAP2O60256 369 aa12.72□□□□□ -0.37
TSKU-203ENST00000527881 GRAP2O75791 330 aa12.72□□□□□ -0.37
TSKU-203ENST00000527881 ERBB2P04626 1255 aa12.72□□□□□ -0.37
TSKU-203ENST00000527881 C8BP07358 591 aa12.72□□□□□ -0.37
TSKU-203ENST00000527881 HSPA8P11142 646 aaKnown RBP12.72□□□□□ -0.37
TSKU-203ENST00000527881 WNT7BP56706 349 aa12.72□□□□□ -0.37
TSKU-203ENST00000527881 RHDQ02161 417 aa12.72□□□□□ -0.37
TSKU-203ENST00000527881 PRKCQQ04759 706 aa12.72□□□□□ -0.37
TSKU-203ENST00000527881 DGKDQ16760 1214 aa12.72□□□□□ -0.37
TSKU-203ENST00000527881 PITRM1Q5JRX3 1037 aa12.72□□□□□ -0.37
TSKU-203ENST00000527881 CAMK1DQ8IU85 385 aa12.72□□□□□ -0.37
TSKU-203ENST00000527881 KIAA0319LQ8IZA0 1049 aa12.72□□□□□ -0.37
TSKU-203ENST00000527881 BSNDQ8WZ55 320 aa12.72□□□□□ -0.37
TSKU-203ENST00000527881 LRRC39Q96DD0 335 aa12.72□□□□□ -0.37
TSKU-203ENST00000527881 TCF12Q99081 682 aa12.72□□□□□ -0.37
TSKU-203ENST00000527881 ACO2Q99798 780 aaKnown RBP12.72□□□□□ -0.37
TSKU-203ENST00000527881 HGH1Q9BTY7 390 aa12.72□□□□□ -0.37
TSKU-203ENST00000527881 ADNPQ9H2P0 1102 aa12.72□□□□□ -0.37
TSKU-203ENST00000527881 IL1RL2Q9HB29 575 aa12.72□□□□□ -0.37
TSKU-203ENST00000527881 FANCEQ9HB96 536 aa12.72□□□□□ -0.37
TSKU-203ENST00000527881 ERVK-11Q9UQG0 969 aa12.72□□□□□ -0.37
TSKU-203ENST00000527881 GAKO14976 1311 aa12.72□□□□□ -0.37
TSKU-203ENST00000527881 PTPRJQ12913 1337 aa12.72□□□□□ -0.37
TSKU-203ENST00000527881 EIF3FO00303 357 aaPredicted RBP12.71□□□□□ -0.37
TSKU-203ENST00000527881 VNN1O95497 513 aa12.71□□□□□ -0.37
TSKU-203ENST00000527881 MYCLP12524 364 aaPredicted RBP12.71□□□□□ -0.37
TSKU-203ENST00000527881 GLDCP23378 1020 aa12.71□□□□□ -0.37
TSKU-203ENST00000527881 EPHX2P34913 555 aa12.71□□□□□ -0.37
TSKU-203ENST00000527881 GLRBP48167 497 aa12.71□□□□□ -0.37
TSKU-203ENST00000527881 RPS3AP61247 264 aaKnown RBP12.71□□□□□ -0.37
TSKU-203ENST00000527881 CREB5Q02930 508 aa12.71□□□□□ -0.37
TSKU-203ENST00000527881 NDUFA5Q16718 116 aa12.71□□□□□ -0.37
TSKU-203ENST00000527881 EEPD1Q7L9B9 569 aa12.71□□□□□ -0.37
TSKU-203ENST00000527881 BTLAQ7Z6A9 289 aa12.71□□□□□ -0.37
TSKU-203ENST00000527881 ZNF354CQ86Y25 554 aa12.71□□□□□ -0.37
TSKU-203ENST00000527881 EXOC8Q8IYI6 725 aa12.71□□□□□ -0.37
TSKU-203ENST00000527881 ARFGAP1Q8N6T3 406 aa12.71□□□□□ -0.37
TSKU-203ENST00000527881 ING2Q9H160 280 aa12.71□□□□□ -0.37
TSKU-203ENST00000527881 SOX17Q9H6I2 414 aaPredicted RBP12.71□□□□□ -0.37
TSKU-203ENST00000527881 PLAC1Q9HBJ0 212 aa12.71□□□□□ -0.37
TSKU-203ENST00000527881 NGRNQ9NPE2 291 aaKnown RBP12.71□□□□□ -0.37
TSKU-203ENST00000527881 DKK3Q9UBP4 350 aa12.71□□□□□ -0.37
TSKU-203ENST00000527881 SLC27A5Q9Y2P5 690 aa12.71□□□□□ -0.37
TSKU-203ENST00000527881 NOTOA8MTQ0 251 aa12.71□□□□□ -0.37
TSKU-203ENST00000527881 CLDN25C9JDP6 229 aa12.71□□□□□ -0.37
TSKU-203ENST00000527881 HMGCRP04035 888 aa12.71□□□□□ -0.37
TSKU-203ENST00000527881 SERPINB1P30740 379 aa12.71□□□□□ -0.37
TSKU-203ENST00000527881 ARL1P40616 181 aaPredicted RBP12.71□□□□□ -0.37
TSKU-203ENST00000527881 OPRL1P41146 370 aa12.71□□□□□ -0.37
TSKU-203ENST00000527881 RPL14P50914 215 aaKnown RBP12.71□□□□□ -0.37
TSKU-203ENST00000527881 TPD52P55327 224 aaPredicted RBP12.71□□□□□ -0.37
TSKU-203ENST00000527881 RSBN1LQ6PCB5 846 aaPredicted RBP12.71□□□□□ -0.37
TSKU-203ENST00000527881 ABRAXAS1Q6UWZ7 409 aa12.71□□□□□ -0.37
TSKU-203ENST00000527881 VASH1Q7L8A9 365 aaPredicted RBP12.71□□□□□ -0.37
TSKU-203ENST00000527881 DHFR2Q86XF0 187 aa12.71□□□□□ -0.37
TSKU-203ENST00000527881 CALML6Q8TD86 181 aa12.71□□□□□ -0.37
TSKU-203ENST00000527881 CANT1Q8WVQ1 401 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms