RNA–Protein interactions for RNA: ENST00000527644.1

TSPAN4-217, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 968 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-217ENST00000527644 SCML1Q9UN30 329 aa27.08■■□□□ 1.93
TSPAN4-217ENST00000527644 TMCO5BA8MYB1 307 aa27.07■■□□□ 1.92
TSPAN4-217ENST00000527644 PATE3B3GLJ2 98 aa27.07■■□□□ 1.92
TSPAN4-217ENST00000527644 OR1E1P30953 314 aa27.07■■□□□ 1.92
TSPAN4-217ENST00000527644 NUMBP49757 651 aa27.07■■□□□ 1.92
TSPAN4-217ENST00000527644 RPL7AP62424 266 aaKnown RBP27.07■■□□□ 1.92
TSPAN4-217ENST00000527644 TTC31Q49AM3 519 aaPredicted RBP27.07■■□□□ 1.92
TSPAN4-217ENST00000527644 TRIM61Q5EBN2 209 aa27.07■■□□□ 1.92
TSPAN4-217ENST00000527644 DCUN1D2Q6PH85 259 aa27.07■■□□□ 1.92
TSPAN4-217ENST00000527644 DGLUCYQ7Z3D6 616 aa27.07■■□□□ 1.92
TSPAN4-217ENST00000527644 RABEPKQ7Z6M1 372 aa27.07■■□□□ 1.92
TSPAN4-217ENST00000527644 CEP76Q8TAP6 659 aa27.07■■□□□ 1.92
TSPAN4-217ENST00000527644 SYN2Q92777 582 aaPredicted RBP27.07■■□□□ 1.92
TSPAN4-217ENST00000527644 IFNKQ9P0W0 207 aa27.07■■□□□ 1.92
TSPAN4-217ENST00000527644 DNAH14Q0VDD8 3507 aa27.07■■□□□ 1.92
TSPAN4-217ENST00000527644 KRT83P78385 493 aa27.06■■□□□ 1.92
TSPAN4-217ENST00000527644 IRX4P78413 519 aa27.06■■□□□ 1.92
TSPAN4-217ENST00000527644 SFSWAPQ12872 951 aaKnown RBP27.06■■□□□ 1.92
TSPAN4-217ENST00000527644 WDR45BQ5MNZ6 344 aa27.06■■□□□ 1.92
TSPAN4-217ENST00000527644 SLC23A3Q6PIS1 610 aa27.06■■□□□ 1.92
TSPAN4-217ENST00000527644 LRSAM1Q6UWE0 723 aa27.06■■□□□ 1.92
TSPAN4-217ENST00000527644 TFAP2DQ7Z6R9 452 aa27.06■■□□□ 1.92
TSPAN4-217ENST00000527644 PTPRN2Q92932 1015 aa27.06■■□□□ 1.92
TSPAN4-217ENST00000527644 NTAN1Q96AB6 310 aa27.06■■□□□ 1.92
TSPAN4-217ENST00000527644 CNPY3Q9BT09 278 aa27.06■■□□□ 1.92
TSPAN4-217ENST00000527644 C2orf49Q9BVC5 232 aaPredicted RBP27.06■■□□□ 1.92
TSPAN4-217ENST00000527644 NUSAP1Q9BXS6 441 aaKnown RBP27.06■■□□□ 1.92
TSPAN4-217ENST00000527644 RETREG1Q9H6L5 497 aa27.06■■□□□ 1.92
TSPAN4-217ENST00000527644 PARVAQ9NVD7 372 aa27.06■■□□□ 1.92
TSPAN4-217ENST00000527644 ATXN2Q99700 1313 aaKnown RBP27.06■■□□□ 1.92
TSPAN4-217ENST00000527644 LNP1A1A4G5 178 aa27.05■■□□□ 1.92
TSPAN4-217ENST00000527644 DDX3XO00571 662 aaKnown RBP eCLIP27.05■■□□□ 1.926e-7■■■□□ 18.5
TSPAN4-217ENST00000527644 CCP110O43303 1012 aa27.05■■□□□ 1.92
TSPAN4-217ENST00000527644 SKILP12757 684 aa27.05■■□□□ 1.92
TSPAN4-217ENST00000527644 DUOXA1Q1HG43 343 aa27.05■■□□□ 1.92
TSPAN4-217ENST00000527644 STPG1Q5TH74 334 aa27.05■■□□□ 1.92
TSPAN4-217ENST00000527644 ZNF783Q6ZMS7 281 aa27.05■■□□□ 1.92
TSPAN4-217ENST00000527644 FAM124AQ86V42 546 aa27.05■■□□□ 1.92
TSPAN4-217ENST00000527644 RGL4Q8IZJ4 473 aa27.05■■□□□ 1.92
TSPAN4-217ENST00000527644 FRS2Q8WU20 508 aa27.05■■□□□ 1.92
TSPAN4-217ENST00000527644 FAM129BQ96TA1 746 aa27.05■■□□□ 1.92
TSPAN4-217ENST00000527644 EDEM2Q9BV94 578 aa27.05■■□□□ 1.92
TSPAN4-217ENST00000527644 PCED1AQ9H1Q7 454 aa27.05■■□□□ 1.92
TSPAN4-217ENST00000527644 ZNF212Q9UDV6 495 aa27.05■■□□□ 1.92
TSPAN4-217ENST00000527644 CAPN11Q9UMQ6 739 aa27.05■■□□□ 1.92
TSPAN4-217ENST00000527644 BZW2Q9Y6E2 419 aaKnown RBP27.05■■□□□ 1.92
TSPAN4-217ENST00000527644 CACNA1AO00555 2505 aa27.05■■□□□ 1.92
TSPAN4-217ENST00000527644 DOCK4Q8N1I0 1966 aa27.04■■□□□ 1.92
TSPAN4-217ENST00000527644 ILVBLA1L0T0 632 aa27.04■■□□□ 1.92
TSPAN4-217ENST00000527644 METTL12A8MUP2 240 aa27.04■■□□□ 1.92
TSPAN4-217ENST00000527644 ATP9BO43861 1147 aa27.04■■□□□ 1.92
TSPAN4-217ENST00000527644 FTLP02792 175 aaPredicted RBP27.04■■□□□ 1.92
TSPAN4-217ENST00000527644 TPM3P06753 285 aa27.04■■□□□ 1.92
TSPAN4-217ENST00000527644 DESP17661 470 aa27.04■■□□□ 1.92
TSPAN4-217ENST00000527644 ZBED6P86452 979 aa27.04■■□□□ 1.92
TSPAN4-217ENST00000527644 MAMLD1Q13495 774 aa27.04■■□□□ 1.92
TSPAN4-217ENST00000527644 ELAVL3Q14576 367 aaKnown RBP27.04■■□□□ 1.92
TSPAN4-217ENST00000527644 CST6Q15828 149 aa27.04■■□□□ 1.92
TSPAN4-217ENST00000527644 MANEALQ5VSG8 457 aa27.04■■□□□ 1.92
TSPAN4-217ENST00000527644 PLEKHA7Q6IQ23 1121 aa27.04■■□□□ 1.92
TSPAN4-217ENST00000527644 USP30Q70CQ3 517 aa27.04■■□□□ 1.92
TSPAN4-217ENST00000527644 SLFN11Q7Z7L1 901 aa27.04■■□□□ 1.92
TSPAN4-217ENST00000527644 CCDC185Q8N715 623 aa27.04■■□□□ 1.92
TSPAN4-217ENST00000527644 PSMB7Q99436 277 aa27.04■■□□□ 1.92
TSPAN4-217ENST00000527644 BTBD1Q9H0C5 482 aa27.04■■□□□ 1.92
TSPAN4-217ENST00000527644 PABPC3Q9H361 631 aaKnown RBP27.04■■□□□ 1.92
TSPAN4-217ENST00000527644 NCKAP1Q9Y2A7 1128 aa27.04■■□□□ 1.92
TSPAN4-217ENST00000527644 RTN2O75298 545 aa27.03■■□□□ 1.92
TSPAN4-217ENST00000527644 PLEKP08567 350 aaPredicted RBP27.03■■□□□ 1.92
TSPAN4-217ENST00000527644 SCAPQ12770 1279 aa27.03■■□□□ 1.92
TSPAN4-217ENST00000527644 ACCSLQ4AC99 568 aa27.03■■□□□ 1.92
TSPAN4-217ENST00000527644 IL31Q6EBC2 164 aa27.03■■□□□ 1.92
TSPAN4-217ENST00000527644 MMAAQ8IVH4 418 aaKnown RBP27.03■■□□□ 1.92
TSPAN4-217ENST00000527644 STK40Q8N2I9 435 aa27.03■■□□□ 1.92
TSPAN4-217ENST00000527644 SH2D3CQ8N5H7 860 aa27.03■■□□□ 1.92
TSPAN4-217ENST00000527644 DCAF4L2Q8NA75 395 aa27.03■■□□□ 1.92
TSPAN4-217ENST00000527644 CPLX3Q8WVH0 158 aa27.03■■□□□ 1.92
TSPAN4-217ENST00000527644 DNASE2BQ8WZ79 361 aa27.03■■□□□ 1.92
TSPAN4-217ENST00000527644 TSPY26PQ9H489 355 aa27.03■■□□□ 1.92
TSPAN4-217ENST00000527644 SGK2Q9HBY8 427 aa27.03■■□□□ 1.92
TSPAN4-217ENST00000527644 SUSD2Q9UGT4 822 aa27.03■■□□□ 1.92
TSPAN4-217ENST00000527644 SLC6A14Q9UN76 642 aa27.03■■□□□ 1.92
TSPAN4-217ENST00000527644 HS3ST2Q9Y278 367 aa27.03■■□□□ 1.92
TSPAN4-217ENST00000527644 PI4KAP42356 2102 aa27.02■■□□□ 1.92
TSPAN4-217ENST00000527644 A0A0D9SEW6 157 aa27.02■■□□□ 1.92
TSPAN4-217ENST00000527644 MEI4A8MW99 385 aa27.02■■□□□ 1.92
TSPAN4-217ENST00000527644 SERPINF2P08697 491 aa27.02■■□□□ 1.92
TSPAN4-217ENST00000527644 ACSL1P33121 698 aa27.02■■□□□ 1.92
TSPAN4-217ENST00000527644 AIF1P55008 147 aa27.02■■□□□ 1.92
TSPAN4-217ENST00000527644 DLG2Q15700 870 aa27.02■■□□□ 1.92
TSPAN4-217ENST00000527644 DCAF12L1Q5VU92 463 aa27.02■■□□□ 1.92
TSPAN4-217ENST00000527644 HGSNATQ68CP4 663 aa27.02■■□□□ 1.92
TSPAN4-217ENST00000527644 SCYL2Q6P3W7 929 aa27.02■■□□□ 1.92
TSPAN4-217ENST00000527644 XPO4Q9C0E2 1151 aaKnown RBP27.02■■□□□ 1.92
TSPAN4-217ENST00000527644 FBXL12Q9NXK8 326 aa27.02■■□□□ 1.92
TSPAN4-217ENST00000527644 VPS51Q9UID3 782 aa27.02■■□□□ 1.92
TSPAN4-217ENST00000527644 LUC7L2Q9Y383 392 aaKnown RBP27.02■■□□□ 1.92
TSPAN4-217ENST00000527644 DCDC2BA2VCK2 349 aa27.01■■□□□ 1.91
TSPAN4-217ENST00000527644 FAM72CH0Y354 149 aa27.01■■□□□ 1.91
TSPAN4-217ENST00000527644 MID1O15344 667 aa27.01■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms