RNA–Protein interactions for RNA: ENST00000527467.5

CTNND1-216, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,071 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-216ENST00000527467 EDARQ9UNE0 448 aa7.36□□□□□ -1.23
CTNND1-216ENST00000527467 SSR3Q9UNL2 185 aa7.36□□□□□ -1.23
CTNND1-216ENST00000527467 DNAJC16Q9Y2G8 782 aa7.36□□□□□ -1.23
CTNND1-216ENST00000527467 GLI3P10071 1580 aa7.36□□□□□ -1.23
CTNND1-216ENST00000527467 C15orf38-AP3S2A0A0A6YYH1 394 aa7.36□□□□□ -1.23
CTNND1-216ENST00000527467 GNG14A0A1W2PPG7 69 aa7.36□□□□□ -1.23
CTNND1-216ENST00000527467 A0A1W2PQC6 194 aa7.36□□□□□ -1.23
CTNND1-216ENST00000527467 C5orf51A6NDU8 294 aa7.36□□□□□ -1.23
CTNND1-216ENST00000527467 SAGE2PA6NJ88 616 aa7.36□□□□□ -1.23
CTNND1-216ENST00000527467 NOTOA8MTQ0 251 aa7.36□□□□□ -1.23
CTNND1-216ENST00000527467 TMEM114B3SHH9 223 aa7.36□□□□□ -1.23
CTNND1-216ENST00000527467 H3BM21 787 aa7.36□□□□□ -1.23
CTNND1-216ENST00000527467 LDOC1O95751 146 aaPredicted RBP7.36□□□□□ -1.23
CTNND1-216ENST00000527467 UBA1P22314 1058 aaKnown RBP7.36□□□□□ -1.23
CTNND1-216ENST00000527467 ME2P23368 584 aa7.36□□□□□ -1.23
CTNND1-216ENST00000527467 AFF1P51825 1210 aaKnown RBP7.36□□□□□ -1.23
CTNND1-216ENST00000527467 GNA13Q14344 377 aa7.36□□□□□ -1.23
CTNND1-216ENST00000527467 FAM131AQ6UXB0 335 aa7.36□□□□□ -1.23
CTNND1-216ENST00000527467 NET1Q7Z628 596 aaPredicted RBP7.36□□□□□ -1.23
CTNND1-216ENST00000527467 ARPINQ7Z6K5 226 aa7.36□□□□□ -1.23
CTNND1-216ENST00000527467 OR8H3Q8N146 312 aa7.36□□□□□ -1.23
CTNND1-216ENST00000527467 RASGRP4Q8TDF6 673 aa7.36□□□□□ -1.23
CTNND1-216ENST00000527467 ZNF669Q96BR6 464 aaPredicted RBP7.36□□□□□ -1.23
CTNND1-216ENST00000527467 TUBGCP5Q96RT8 1024 aa7.36□□□□□ -1.23
CTNND1-216ENST00000527467 LIMD1Q9UGP4 676 aa7.36□□□□□ -1.23
CTNND1-216ENST00000527467 SNX7Q9UNH6 387 aa7.36□□□□□ -1.23
CTNND1-216ENST00000527467 AP3M1Q9Y2T2 418 aa7.36□□□□□ -1.23
CTNND1-216ENST00000527467 NME5P56597 212 aa7.36□□□□□ -1.23
CTNND1-216ENST00000527467 BIKQ13323 160 aa7.36□□□□□ -1.23
CTNND1-216ENST00000527467 CRY2Q49AN0 593 aa7.36□□□□□ -1.23
CTNND1-216ENST00000527467 TMEM110Q86TL2 294 aa7.36□□□□□ -1.23
CTNND1-216ENST00000527467 ADHFE1Q8IWW8 467 aa7.36□□□□□ -1.23
CTNND1-216ENST00000527467 MSL3Q8N5Y2 521 aaKnown RBP7.36□□□□□ -1.23
CTNND1-216ENST00000527467 NSUN7Q8NE18 718 aaKnown RBP7.36□□□□□ -1.23
CTNND1-216ENST00000527467 MCPH1Q8NEM0 835 aa7.36□□□□□ -1.23
CTNND1-216ENST00000527467 TNFAIP8L1Q8WVP5 186 aa7.36□□□□□ -1.23
CTNND1-216ENST00000527467 ANKRD7Q92527 254 aa7.36□□□□□ -1.23
CTNND1-216ENST00000527467 CRELD1Q96HD1 420 aa7.36□□□□□ -1.23
CTNND1-216ENST00000527467 ERP44Q9BS26 406 aa7.36□□□□□ -1.23
CTNND1-216ENST00000527467 ATXN3LQ9H3M9 355 aa7.36□□□□□ -1.23
CTNND1-216ENST00000527467 REEP1Q9H902 201 aa7.36□□□□□ -1.23
CTNND1-216ENST00000527467 CCDC177Q9NQR7 707 aaPredicted RBP7.36□□□□□ -1.23
CTNND1-216ENST00000527467 PRDM8Q9NQV8 689 aa7.36□□□□□ -1.23
CTNND1-216ENST00000527467 STARD13Q9Y3M8 1113 aa7.36□□□□□ -1.23
CTNND1-216ENST00000527467 PCYT1BQ9Y5K3 369 aaPredicted RBP7.36□□□□□ -1.23
CTNND1-216ENST00000527467 ALG5Q9Y673 324 aa7.36□□□□□ -1.23
CTNND1-216ENST00000527467 VPS26AO75436 327 aa7.36□□□□□ -1.23
CTNND1-216ENST00000527467 FSBPO95073 299 aa7.36□□□□□ -1.23
CTNND1-216ENST00000527467 GRIK1P39086 918 aa7.36□□□□□ -1.23
CTNND1-216ENST00000527467 AP3M2P53677 418 aa7.36□□□□□ -1.23
CTNND1-216ENST00000527467 PSMC5P62195 406 aa7.36□□□□□ -1.23
CTNND1-216ENST00000527467 CENPCQ03188 943 aa7.36□□□□□ -1.23
CTNND1-216ENST00000527467 PTH1RQ03431 593 aa7.36□□□□□ -1.23
CTNND1-216ENST00000527467 ENPEPQ07075 957 aa7.36□□□□□ -1.23
CTNND1-216ENST00000527467 PLD1Q13393 1074 aa7.36□□□□□ -1.23
CTNND1-216ENST00000527467 CAMK2GQ13555 558 aaPredicted RBP7.36□□□□□ -1.23
CTNND1-216ENST00000527467 ITGA9Q13797 1035 aa7.36□□□□□ -1.23
CTNND1-216ENST00000527467 VGLL4Q14135 290 aa7.36□□□□□ -1.23
CTNND1-216ENST00000527467 PDK1Q15118 436 aa7.36□□□□□ -1.23
CTNND1-216ENST00000527467 UBE3CQ15386 1083 aa7.36□□□□□ -1.23
CTNND1-216ENST00000527467 PTF1AQ7RTS3 328 aa7.36□□□□□ -1.23
CTNND1-216ENST00000527467 DSG4Q86SJ6 1040 aa7.36□□□□□ -1.23
CTNND1-216ENST00000527467 PHC2Q8IXK0 858 aa7.36□□□□□ -1.23
CTNND1-216ENST00000527467 PPIL6Q8IXY8 311 aa7.36□□□□□ -1.23
CTNND1-216ENST00000527467 DAW1Q8N136 415 aa7.36□□□□□ -1.23
CTNND1-216ENST00000527467 DEPDC4Q8N2C3 294 aa7.36□□□□□ -1.23
CTNND1-216ENST00000527467 HNRNPLLQ8WVV9 542 aaKnown RBP7.36□□□□□ -1.23
CTNND1-216ENST00000527467 ACSF2Q96CM8 615 aaPredicted RBP7.36□□□□□ -1.23
CTNND1-216ENST00000527467 ITCHQ96J02 903 aa7.36□□□□□ -1.23
CTNND1-216ENST00000527467 WDR24Q96S15 920 aa7.36□□□□□ -1.23
CTNND1-216ENST00000527467 CATSPERZQ9NTU4 200 aa7.36□□□□□ -1.23
CTNND1-216ENST00000527467 CRLS1Q9UJA2 301 aa7.36□□□□□ -1.23
CTNND1-216ENST00000527467 GDAQ9Y2T3 454 aa7.36□□□□□ -1.23
CTNND1-216ENST00000527467 DHRS7Q9Y394 339 aa7.36□□□□□ -1.23
CTNND1-216ENST00000527467 REXO2Q9Y3B8 237 aaKnown RBP7.36□□□□□ -1.23
CTNND1-216ENST00000527467 DAGLAQ9Y4D2 1042 aa7.36□□□□□ -1.23
CTNND1-216ENST00000527467 RIC1Q4ADV7 1423 aa7.36□□□□□ -1.23
CTNND1-216ENST00000527467 TTC26A0AVF1 554 aa7.35□□□□□ -1.23
CTNND1-216ENST00000527467 SRRM3A6NNA2 597 aaPredicted RBP7.35□□□□□ -1.23
CTNND1-216ENST00000527467 USP27XA6NNY8 438 aa7.35□□□□□ -1.23
CTNND1-216ENST00000527467 AKAP8O43823 692 aaKnown RBP7.35□□□□□ -1.23
CTNND1-216ENST00000527467 PLIN3O60664 434 aa7.35□□□□□ -1.23
CTNND1-216ENST00000527467 UMPSP11172 480 aa7.35□□□□□ -1.23
CTNND1-216ENST00000527467 VAMP7P51809 220 aa7.35□□□□□ -1.23
CTNND1-216ENST00000527467 ITGA8P53708 1063 aa7.35□□□□□ -1.23
CTNND1-216ENST00000527467 MAD2L1Q13257 205 aaPredicted RBP7.35□□□□□ -1.23
CTNND1-216ENST00000527467 RIPK1Q13546 671 aa7.35□□□□□ -1.23
CTNND1-216ENST00000527467 MYBPC3Q14896 1274 aa7.35□□□□□ -1.23
CTNND1-216ENST00000527467 VEPH1Q14D04 833 aa7.35□□□□□ -1.23
CTNND1-216ENST00000527467 MAPK6Q16659 721 aa7.35□□□□□ -1.23
CTNND1-216ENST00000527467 LINC00523Q86TU6 105 aa7.35□□□□□ -1.23
CTNND1-216ENST00000527467 HDDC3Q8N4P3 179 aa7.35□□□□□ -1.23
CTNND1-216ENST00000527467 BBS1Q8NFJ9 593 aa7.35□□□□□ -1.23
CTNND1-216ENST00000527467 BPIFB6Q8NFQ5 453 aa7.35□□□□□ -1.23
CTNND1-216ENST00000527467 ING5Q8WYH8 240 aa7.35□□□□□ -1.23
CTNND1-216ENST00000527467 HTRA1Q92743 480 aa7.35□□□□□ -1.23
CTNND1-216ENST00000527467 SAMD11Q96NU1 681 aa7.35□□□□□ -1.23
CTNND1-216ENST00000527467 AGPAT1Q99943 283 aa7.35□□□□□ -1.23
CTNND1-216ENST00000527467 COPS4Q9BT78 406 aa7.35□□□□□ -1.23
CTNND1-216ENST00000527467 CCDC86Q9H6F5 360 aaKnown RBP7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms