RNA–Protein interactions for RNA: ENST00000526977.5

VPS28-207, Transcript of VPS28, ESCRT-I subunit, humanhuman

TSL 5

Gene VPS28, Length 2,036 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS28-207ENST00000526977 ATP5DP30049 168 aa19.35■□□□□ 0.69
VPS28-207ENST00000526977 SLC11A2P49281 568 aa19.35■□□□□ 0.69
VPS28-207ENST00000526977 KCNQ1P51787 676 aa19.35■□□□□ 0.69
VPS28-207ENST00000526977 CYP4F8P98187 520 aa19.35■□□□□ 0.69
VPS28-207ENST00000526977 MS4A13Q5J8X5 152 aa19.35■□□□□ 0.69
VPS28-207ENST00000526977 ARL14EPQ8N8R7 260 aaPredicted RBP19.35■□□□□ 0.69
VPS28-207ENST00000526977 MAB21L3Q8N8X9 362 aa19.35■□□□□ 0.69
VPS28-207ENST00000526977 FBXO36Q8NEA4 188 aa19.35■□□□□ 0.69
VPS28-207ENST00000526977 TFB1MQ8WVM0 346 aaKnown RBP19.35■□□□□ 0.69
VPS28-207ENST00000526977 MAML1Q92585 1016 aa19.35■□□□□ 0.69
VPS28-207ENST00000526977 SFXN1Q9H9B4 322 aa19.35■□□□□ 0.69
VPS28-207ENST00000526977 LMCD1Q9NZU5 365 aa19.35■□□□□ 0.69
VPS28-207ENST00000526977 ZMYM5Q9UJ78 669 aa19.35■□□□□ 0.69
VPS28-207ENST00000526977 SNX10Q9Y5X0 201 aa19.35■□□□□ 0.69
VPS28-207ENST00000526977 TRAV19A0A0A6YYK7 116 aa19.35■□□□□ 0.69
VPS28-207ENST00000526977 FGF10O15520 208 aaPredicted RBP19.35■□□□□ 0.69
VPS28-207ENST00000526977 MFSD11O43934 449 aa19.35■□□□□ 0.69
VPS28-207ENST00000526977 STC2O76061 302 aa19.35■□□□□ 0.69
VPS28-207ENST00000526977 METTL18O95568 372 aa19.35■□□□□ 0.69
VPS28-207ENST00000526977 SSTR1P30872 391 aa19.35■□□□□ 0.69
VPS28-207ENST00000526977 HOXC13P31276 330 aa19.35■□□□□ 0.69
VPS28-207ENST00000526977 MAGEA6P43360 314 aa19.35■□□□□ 0.69
VPS28-207ENST00000526977 SLC7A9P82251 487 aa19.35■□□□□ 0.69
VPS28-207ENST00000526977 PAFAH1B3Q15102 231 aaKnown RBP19.35■□□□□ 0.69
VPS28-207ENST00000526977 ARHGAP15Q53QZ3 475 aa19.35■□□□□ 0.69
VPS28-207ENST00000526977 ZNF697Q5TEC3 545 aa19.35■□□□□ 0.69
VPS28-207ENST00000526977 FAXCQ5TGI0 409 aa19.35■□□□□ 0.69
VPS28-207ENST00000526977 PIK3R6Q5UE93 754 aa19.35■□□□□ 0.69
VPS28-207ENST00000526977 MANEALQ5VSG8 457 aa19.35■□□□□ 0.69
VPS28-207ENST00000526977 C3orf62Q6ZUJ4 267 aa19.35■□□□□ 0.69
VPS28-207ENST00000526977 TDRPQ86YL5 185 aa19.35■□□□□ 0.69
VPS28-207ENST00000526977 IGDCC3Q8IVU1 814 aa19.35■□□□□ 0.69
VPS28-207ENST00000526977 NETO2Q8NC67 525 aa19.35■□□□□ 0.69
VPS28-207ENST00000526977 ZNF707Q96C28 371 aaPredicted RBP19.35■□□□□ 0.69
VPS28-207ENST00000526977 TBC1D31Q96DN5 1066 aa19.35■□□□□ 0.69
VPS28-207ENST00000526977 LGMNQ99538 433 aa19.35■□□□□ 0.69
VPS28-207ENST00000526977 KLC2Q9H0B6 622 aa19.35■□□□□ 0.69
VPS28-207ENST00000526977 CATSPERBQ9H7T0 1116 aa19.35■□□□□ 0.69
VPS28-207ENST00000526977 GKN1Q9NS71 199 aa19.35■□□□□ 0.69
VPS28-207ENST00000526977 PPARGC1AQ9UBK2 798 aaKnown RBP19.35■□□□□ 0.69
VPS28-207ENST00000526977 RABGEF1Q9UJ41 708 aa19.35■□□□□ 0.69
VPS28-207ENST00000526977 PDE4DIPQ5VU43 2346 aa19.35■□□□□ 0.69
VPS28-207ENST00000526977 E9PAM4 449 aa19.34■□□□□ 0.69
VPS28-207ENST00000526977 DCLK1O15075 740 aa19.34■□□□□ 0.69
VPS28-207ENST00000526977 TMEM184AQ6ZMB5 413 aa19.34■□□□□ 0.69
VPS28-207ENST00000526977 PPP1R21Q6ZMI0 780 aa19.34■□□□□ 0.69
VPS28-207ENST00000526977 ATP11CQ8NB49 1132 aa19.34■□□□□ 0.69
VPS28-207ENST00000526977 SHKBP1Q8TBC3 707 aa19.34■□□□□ 0.69
VPS28-207ENST00000526977 SLC22A12Q96S37 553 aa19.34■□□□□ 0.69
VPS28-207ENST00000526977 PIDD1Q9HB75 910 aa19.34■□□□□ 0.69
VPS28-207ENST00000526977 DONSONQ9NYP3 566 aa19.34■□□□□ 0.69
VPS28-207ENST00000526977 TRANK1O15050 2925 aa19.34■□□□□ 0.69
VPS28-207ENST00000526977 GMNCA6NCL1 334 aa19.34■□□□□ 0.69
VPS28-207ENST00000526977 POC1B-GALNT4F8VUJ3 575 aa19.34■□□□□ 0.69
VPS28-207ENST00000526977 ACSL4O60488 711 aa19.34■□□□□ 0.69
VPS28-207ENST00000526977 AVILO75366 819 aa19.34■□□□□ 0.69
VPS28-207ENST00000526977 CKMP06732 381 aa19.34■□□□□ 0.69
VPS28-207ENST00000526977 VAV1P15498 845 aa19.34■□□□□ 0.69
VPS28-207ENST00000526977 CCR2P41597 374 aa19.34■□□□□ 0.69
VPS28-207ENST00000526977 ELK3P41970 407 aa19.34■□□□□ 0.69
VPS28-207ENST00000526977 HEATR6Q6AI08 1181 aaKnown RBP19.34■□□□□ 0.69
VPS28-207ENST00000526977 RWDD4Q6NW29 188 aaKnown RBP19.34■□□□□ 0.69
VPS28-207ENST00000526977 GRASPQ7Z6J2 395 aaPredicted RBP19.34■□□□□ 0.69
VPS28-207ENST00000526977 PALM2Q8IXS6 379 aa19.34■□□□□ 0.69
VPS28-207ENST00000526977 RIBC1Q8N443 379 aaPredicted RBP19.34■□□□□ 0.69
VPS28-207ENST00000526977 HTR3CQ8WXA8 447 aa19.34■□□□□ 0.69
VPS28-207ENST00000526977 ZFRQ96KR1 1074 aaKnown RBP19.34■□□□□ 0.69
VPS28-207ENST00000526977 XPO6Q96QU8 1125 aaKnown RBP19.34■□□□□ 0.69
VPS28-207ENST00000526977 CCT8L2Q96SF2 557 aa19.34■□□□□ 0.69
VPS28-207ENST00000526977 SLC46A2Q9BY10 475 aa19.34■□□□□ 0.69
VPS28-207ENST00000526977 RAD54BQ9Y620 910 aa19.34■□□□□ 0.69
VPS28-207ENST00000526977 TEX264Q9Y6I9 313 aa19.34■□□□□ 0.69
VPS28-207ENST00000526977 ANAPC1Q9H1A4 1944 aa19.33■□□□□ 0.69
VPS28-207ENST00000526977 LATS1O95835 1130 aa19.33■□□□□ 0.68
VPS28-207ENST00000526977 GJA1P17302 382 aa19.33■□□□□ 0.68
VPS28-207ENST00000526977 MLLT1Q03111 559 aaPredicted RBP19.33■□□□□ 0.68
VPS28-207ENST00000526977 NLRP14Q86W24 1093 aa19.33■□□□□ 0.68
VPS28-207ENST00000526977 VN1R2Q8NFZ6 395 aa19.33■□□□□ 0.68
VPS28-207ENST00000526977 ATXN2LQ8WWM7 1075 aaKnown RBP19.33■□□□□ 0.68
VPS28-207ENST00000526977 SMG7Q92540 1137 aaKnown RBP19.33■□□□□ 0.68
VPS28-207ENST00000526977 PRMT1Q99873 361 aaKnown RBP19.33■□□□□ 0.68
VPS28-207ENST00000526977 IGFLR1Q9H665 355 aa19.33■□□□□ 0.68
VPS28-207ENST00000526977 TASP1Q9H6P5 420 aa19.33■□□□□ 0.68
VPS28-207ENST00000526977 CPQQ9Y646 472 aa19.33■□□□□ 0.68
VPS28-207ENST00000526977 TMEM265A0A087WTH1 108 aa19.32■□□□□ 0.68
VPS28-207ENST00000526977 NDUFAB1O14561 156 aa19.32■□□□□ 0.68
VPS28-207ENST00000526977 MOSPD3O75425 235 aa19.32■□□□□ 0.68
VPS28-207ENST00000526977 APRTP07741 180 aa19.32■□□□□ 0.68
VPS28-207ENST00000526977 TSHRP16473 764 aa19.32■□□□□ 0.68
VPS28-207ENST00000526977 CORO1AP31146 461 aaKnown RBP19.32■□□□□ 0.68
VPS28-207ENST00000526977 PHBP35232 272 aa19.32■□□□□ 0.68
VPS28-207ENST00000526977 SERPINB6P35237 376 aa19.32■□□□□ 0.68
VPS28-207ENST00000526977 PRKD1Q15139 912 aaPredicted RBP19.32■□□□□ 0.68
VPS28-207ENST00000526977 PRSS36Q5K4E3 855 aa19.32■□□□□ 0.68
VPS28-207ENST00000526977 GPR158Q5T848 1215 aa19.32■□□□□ 0.68
VPS28-207ENST00000526977 CAND1Q86VP6 1230 aaKnown RBP19.32■□□□□ 0.68
VPS28-207ENST00000526977 DENND1CQ8IV53 801 aa19.32■□□□□ 0.68
VPS28-207ENST00000526977 AGGF1Q8N302 714 aaeCLIP19.32■□□□□ 0.68
VPS28-207ENST00000526977 EFHBQ8N7U6 833 aa19.32■□□□□ 0.68
VPS28-207ENST00000526977 DDX50Q9BQ39 737 aaKnown RBP19.32■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms