RNA–Protein interactions for RNA: ENST00000526954.5

CAPN1-205, Transcript of calpain 1, humanhuman

TSL 5

Gene CAPN1, Length 754 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-205ENST00000526954 TGM2P21980 687 aa16.93■□□□□ 0.3
CAPN1-205ENST00000526954 ADCY2Q08462 1091 aa16.93■□□□□ 0.3
CAPN1-205ENST00000526954 POLD3Q15054 466 aaPredicted RBP16.93■□□□□ 0.3
CAPN1-205ENST00000526954 EIF4HQ15056 248 aaKnown RBP16.93■□□□□ 0.3
CAPN1-205ENST00000526954 PON2Q15165 354 aa16.93■□□□□ 0.3
CAPN1-205ENST00000526954 EDAQ92838 391 aa16.93■□□□□ 0.3
CAPN1-205ENST00000526954 ARHGEF2Q92974 986 aaKnown RBP16.93■□□□□ 0.3
CAPN1-205ENST00000526954 TTC17Q96AE7 1141 aa16.93■□□□□ 0.3
CAPN1-205ENST00000526954 C16orf45Q96MC5 204 aaPredicted RBP16.93■□□□□ 0.3
CAPN1-205ENST00000526954 OSBPL9Q96SU4 736 aa16.93■□□□□ 0.3
CAPN1-205ENST00000526954 PSMB7Q99436 277 aa16.93■□□□□ 0.3
CAPN1-205ENST00000526954 HERPUD2Q9BSE4 406 aa16.93■□□□□ 0.3
CAPN1-205ENST00000526954 HEMGNQ9BXL5 484 aa16.93■□□□□ 0.3
CAPN1-205ENST00000526954 SLC39A8Q9C0K1 460 aa16.93■□□□□ 0.3
CAPN1-205ENST00000526954 MUC3BQ9H195 1237 aa16.93■□□□□ 0.3
CAPN1-205ENST00000526954 MFSD11O43934 449 aa16.92■□□□□ 0.3
CAPN1-205ENST00000526954 TCP1P17987 556 aaKnown RBP16.92■□□□□ 0.3
CAPN1-205ENST00000526954 CXCR5P32302 372 aa16.92■□□□□ 0.3
CAPN1-205ENST00000526954 TNFRSF4P43489 277 aa16.92■□□□□ 0.3
CAPN1-205ENST00000526954 NR2C2P49116 596 aa16.92■□□□□ 0.3
CAPN1-205ENST00000526954 KDSRQ06136 332 aa16.92■□□□□ 0.3
CAPN1-205ENST00000526954 SIGLEC14Q08ET2 396 aa16.92■□□□□ 0.3
CAPN1-205ENST00000526954 GRSF1Q12849 480 aaKnown RBP eCLIP16.92■□□□□ 0.3
CAPN1-205ENST00000526954 SLC10A2Q12908 348 aaPredicted RBP16.92■□□□□ 0.3
CAPN1-205ENST00000526954 KLF1Q13351 362 aaPredicted RBP16.92■□□□□ 0.3
CAPN1-205ENST00000526954 LLGL1Q15334 1064 aa16.92■□□□□ 0.3
CAPN1-205ENST00000526954 FUT11Q495W5 492 aa16.92■□□□□ 0.3
CAPN1-205ENST00000526954 PITRM1Q5JRX3 1037 aa16.92■□□□□ 0.3
CAPN1-205ENST00000526954 KAZNQ674X7 775 aa16.92■□□□□ 0.3
CAPN1-205ENST00000526954 TMEM215Q68D42 235 aa16.92■□□□□ 0.3
CAPN1-205ENST00000526954 FSTL4Q6MZW2 842 aa16.92■□□□□ 0.3
CAPN1-205ENST00000526954 SYT10Q6XYQ8 523 aa16.92■□□□□ 0.3
CAPN1-205ENST00000526954 LRRC49Q8IUZ0 686 aa16.92■□□□□ 0.3
CAPN1-205ENST00000526954 APCDD1Q8J025 514 aa16.92■□□□□ 0.3
CAPN1-205ENST00000526954 SIX5Q8N196 739 aa16.92■□□□□ 0.3
CAPN1-205ENST00000526954 ZNF687Q8N1G0 1237 aa16.92■□□□□ 0.3
CAPN1-205ENST00000526954 RASGEF1CQ8N431 466 aa16.92■□□□□ 0.3
CAPN1-205ENST00000526954 DCAF4L2Q8NA75 395 aa16.92■□□□□ 0.3
CAPN1-205ENST00000526954 OR7D4Q8NG98 312 aa16.92■□□□□ 0.3
CAPN1-205ENST00000526954 CELF6Q96J87 481 aaKnown RBP16.92■□□□□ 0.3
CAPN1-205ENST00000526954 NELL2Q99435 816 aa16.92■□□□□ 0.3
CAPN1-205ENST00000526954 DTLQ9NZJ0 730 aa16.92■□□□□ 0.3
CAPN1-205ENST00000526954 VPS28Q9UK41 221 aa16.92■□□□□ 0.3
CAPN1-205ENST00000526954 TTC7AQ9ULT0 858 aaPredicted RBP16.92■□□□□ 0.3
CAPN1-205ENST00000526954 MRPS17Q9Y2R5 130 aaKnown RBP16.92■□□□□ 0.3
CAPN1-205ENST00000526954 STARD13Q9Y3M8 1113 aa16.92■□□□□ 0.3
CAPN1-205ENST00000526954 TBC1D3BA6NDS4 549 aa16.91■□□□□ 0.3
CAPN1-205ENST00000526954 ARHGAP42A6NI28 874 aa16.91■□□□□ 0.3
CAPN1-205ENST00000526954 PRRT4C9JH25 899 aa16.91■□□□□ 0.3
CAPN1-205ENST00000526954 APOC4-APOC2K7ER74 178 aa16.91■□□□□ 0.3
CAPN1-205ENST00000526954 NCAM2O15394 837 aa16.91■□□□□ 0.3
CAPN1-205ENST00000526954 KDELR3O43731 214 aa16.91■□□□□ 0.3
CAPN1-205ENST00000526954 CEP104O60308 925 aa16.91■□□□□ 0.3
CAPN1-205ENST00000526954 APOC2P02655 101 aa16.91■□□□□ 0.3
CAPN1-205ENST00000526954 ALADP13716 330 aa16.91■□□□□ 0.3
CAPN1-205ENST00000526954 POLR2EP19388 210 aaKnown RBP16.91■□□□□ 0.3
CAPN1-205ENST00000526954 CASQ1P31415 396 aa16.91■□□□□ 0.3
CAPN1-205ENST00000526954 ACVRL1P37023 503 aa16.91■□□□□ 0.3
CAPN1-205ENST00000526954 GBE1Q04446 702 aa16.91■□□□□ 0.3
CAPN1-205ENST00000526954 SULT2A1Q06520 285 aa16.91■□□□□ 0.3
CAPN1-205ENST00000526954 GALNT2Q10471 571 aa16.91■□□□□ 0.3
CAPN1-205ENST00000526954 SERINC3Q13530 473 aa16.91■□□□□ 0.3
CAPN1-205ENST00000526954 MBLAC2Q68D91 279 aa16.91■□□□□ 0.3
CAPN1-205ENST00000526954 BZW1Q7L1Q6 419 aaKnown RBP16.91■□□□□ 0.3
CAPN1-205ENST00000526954 SLC13A5Q86YT5 568 aaPredicted RBP16.91■□□□□ 0.3
CAPN1-205ENST00000526954 TP53INP2Q8IXH6 220 aa16.91■□□□□ 0.3
CAPN1-205ENST00000526954 EZH1Q92800 747 aaPredicted RBP16.91■□□□□ 0.3
CAPN1-205ENST00000526954 ACDQ96AP0 544 aa16.91■□□□□ 0.3
CAPN1-205ENST00000526954 HMCESQ96FZ2 354 aa16.91■□□□□ 0.3
CAPN1-205ENST00000526954 C2orf49Q9BVC5 232 aaPredicted RBP16.91■□□□□ 0.3
CAPN1-205ENST00000526954 ATP13A1Q9HD20 1204 aa16.91■□□□□ 0.3
CAPN1-205ENST00000526954 ELOVL2Q9NXB9 296 aa16.91■□□□□ 0.3
CAPN1-205ENST00000526954 TRIOO75962 3097 aa16.91■□□□□ 0.3
CAPN1-205ENST00000526954 MYO18AQ92614 2054 aaKnown RBP16.9■□□□□ 0.3
CAPN1-205ENST00000526954 KANSL1LA0AUZ9 987 aa16.9■□□□□ 0.3
CAPN1-205ENST00000526954 K7EQS6 105 aa16.9■□□□□ 0.3
CAPN1-205ENST00000526954 ZMPSTE24O75844 475 aa16.9■□□□□ 0.3
CAPN1-205ENST00000526954 EGFP01133 1207 aa16.9■□□□□ 0.3
CAPN1-205ENST00000526954 ASLP04424 464 aa16.9■□□□□ 0.3
CAPN1-205ENST00000526954 ATP5BP06576 529 aaKnown RBP16.9■□□□□ 0.3
CAPN1-205ENST00000526954 MX2P20592 715 aa16.9■□□□□ 0.3
CAPN1-205ENST00000526954 CD72P21854 359 aa16.9■□□□□ 0.3
CAPN1-205ENST00000526954 VASPP50552 380 aaPredicted RBP16.9■□□□□ 0.3
CAPN1-205ENST00000526954 PAPOLAP51003 745 aaKnown RBP16.9■□□□□ 0.3
CAPN1-205ENST00000526954 DYNLT1P63172 113 aa16.9■□□□□ 0.3
CAPN1-205ENST00000526954 CCINQ13939 588 aa16.9■□□□□ 0.3
CAPN1-205ENST00000526954 FBXO43Q4G163 708 aa16.9■□□□□ 0.3
CAPN1-205ENST00000526954 IL31Q6EBC2 164 aa16.9■□□□□ 0.3
CAPN1-205ENST00000526954 SFTPA1Q8IWL2 248 aa16.9■□□□□ 0.3
CAPN1-205ENST00000526954 KCNV2Q8TDN2 545 aa16.9■□□□□ 0.3
CAPN1-205ENST00000526954 COG1Q8WTW3 980 aa16.9■□□□□ 0.3
CAPN1-205ENST00000526954 P3H4Q92791 437 aa16.9■□□□□ 0.3
CAPN1-205ENST00000526954 OLFM3Q96PB7 478 aa16.9■□□□□ 0.3
CAPN1-205ENST00000526954 SPON2Q9BUD6 331 aa16.9■□□□□ 0.3
CAPN1-205ENST00000526954 OSBPL6Q9BZF3 934 aa16.9■□□□□ 0.3
CAPN1-205ENST00000526954 VPS51Q9UID3 782 aa16.9■□□□□ 0.3
CAPN1-205ENST00000526954 HPCAL4Q9UM19 191 aa16.9■□□□□ 0.3
CAPN1-205ENST00000526954 HEY1Q9Y5J3 304 aa16.9■□□□□ 0.3
CAPN1-205ENST00000526954 SAR1BQ9Y6B6 198 aa16.9■□□□□ 0.3
CAPN1-205ENST00000526954 SHROOM3Q8TF72 1996 aa16.89■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms