RNA–Protein interactions for RNA: ENST00000526271.2

CPSF1-201, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3

Gene CPSF1, Length 697 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-201ENST00000526271 IL1BP01584 269 aa14.71□□□□□ -0.05
CPSF1-201ENST00000526271 MYF5P13349 255 aa14.71□□□□□ -0.05
CPSF1-201ENST00000526271 ABCB4P21439 1286 aa14.71□□□□□ -0.05
CPSF1-201ENST00000526271 GCNT1Q02742 428 aa14.71□□□□□ -0.05
CPSF1-201ENST00000526271 LRRC63Q05C16 580 aa14.71□□□□□ -0.05
CPSF1-201ENST00000526271 ELAVL3Q14576 367 aaKnown RBP14.71□□□□□ -0.05
CPSF1-201ENST00000526271 FBXL22Q6P050 247 aa14.71□□□□□ -0.05
CPSF1-201ENST00000526271 GJB7Q6PEY0 223 aa14.71□□□□□ -0.05
CPSF1-201ENST00000526271 TMEM110Q86TL2 294 aa14.71□□□□□ -0.05
CPSF1-201ENST00000526271 CHSY1Q86X52 802 aa14.71□□□□□ -0.05
CPSF1-201ENST00000526271 MFSD2AQ8NA29 543 aa14.71□□□□□ -0.05
CPSF1-201ENST00000526271 EHBP1Q8NDI1 1231 aa14.71□□□□□ -0.05
CPSF1-201ENST00000526271 FAM149B1Q96BN6 582 aa14.71□□□□□ -0.05
CPSF1-201ENST00000526271 NXPE2Q96DL1 559 aa14.71□□□□□ -0.05
CPSF1-201ENST00000526271 GSDMAQ96QA5 445 aa14.71□□□□□ -0.05
CPSF1-201ENST00000526271 UBL7Q96S82 380 aaPredicted RBP14.71□□□□□ -0.05
CPSF1-201ENST00000526271 NRSN2Q9GZP1 204 aa14.71□□□□□ -0.05
CPSF1-201ENST00000526271 SCAND2PQ9GZW5 306 aaPredicted RBP14.71□□□□□ -0.05
CPSF1-201ENST00000526271 MAN1B1Q9UKM7 699 aa14.71□□□□□ -0.05
CPSF1-201ENST00000526271 PPM1HQ9ULR3 514 aa14.71□□□□□ -0.05
CPSF1-201ENST00000526271 PCDHB1Q9Y5F3 818 aa14.71□□□□□ -0.05
CPSF1-201ENST00000526271 PIEZO2Q9H5I5 2752 aa14.7□□□□□ -0.06
CPSF1-201ENST00000526271 MYO18BQ8IUG5 2567 aa14.7□□□□□ -0.06
CPSF1-201ENST00000526271 TBC1D3DA0A087WVF3 549 aa14.7□□□□□ -0.06
CPSF1-201ENST00000526271 TBC1D3IA0A087WXS9 549 aa14.7□□□□□ -0.06
CPSF1-201ENST00000526271 TBC1D3EA0A087X179 549 aa14.7□□□□□ -0.06
CPSF1-201ENST00000526271 TBC1D3KA0A087X1G2 549 aa14.7□□□□□ -0.06
CPSF1-201ENST00000526271 A0A1W2PNU3 283 aaPredicted RBP14.7□□□□□ -0.06
CPSF1-201ENST00000526271 TBC1D3FA6NER0 549 aaPredicted RBP14.7□□□□□ -0.06
CPSF1-201ENST00000526271 TBC1D3LB9A6J9 549 aa14.7□□□□□ -0.06
CPSF1-201ENST00000526271 CASC3O15234 703 aaKnown RBP14.7□□□□□ -0.06
CPSF1-201ENST00000526271 ATXN7O15265 892 aaPredicted RBP14.7□□□□□ -0.06
CPSF1-201ENST00000526271 SIGLEC6O43699 453 aa14.7□□□□□ -0.06
CPSF1-201ENST00000526271 ATP9BO43861 1147 aa14.7□□□□□ -0.06
CPSF1-201ENST00000526271 RNASEH1O60930 286 aaKnown RBP14.7□□□□□ -0.06
CPSF1-201ENST00000526271 ADH1BP00325 375 aa14.7□□□□□ -0.06
CPSF1-201ENST00000526271 C1SP09871 688 aa14.7□□□□□ -0.06
CPSF1-201ENST00000526271 TBC1D3HP0C7X1 549 aa14.7□□□□□ -0.06
CPSF1-201ENST00000526271 TFE3P19532 575 aaPredicted RBP14.7□□□□□ -0.06
CPSF1-201ENST00000526271 C1QBPQ07021 282 aaKnown RBP14.7□□□□□ -0.06
CPSF1-201ENST00000526271 INAVAQ3KP66 663 aa14.7□□□□□ -0.06
CPSF1-201ENST00000526271 PIP5KL1Q5T9C9 394 aa14.7□□□□□ -0.06
CPSF1-201ENST00000526271 TBC1D3GQ6DHY5 549 aa14.7□□□□□ -0.06
CPSF1-201ENST00000526271 TBC1D3CQ6IPX1 549 aa14.7□□□□□ -0.06
CPSF1-201ENST00000526271 CLEC17AQ6ZS10 378 aa14.7□□□□□ -0.06
CPSF1-201ENST00000526271 Q6ZVU0 165 aa14.7□□□□□ -0.06
CPSF1-201ENST00000526271 TRIM59Q8IWR1 403 aa14.7□□□□□ -0.06
CPSF1-201ENST00000526271 ZNF683Q8IZ20 524 aa14.7□□□□□ -0.06
CPSF1-201ENST00000526271 TBC1D3Q8IZP1 549 aaPredicted RBP14.7□□□□□ -0.06
CPSF1-201ENST00000526271 DCBLD1Q8N8Z6 715 aa14.7□□□□□ -0.06
CPSF1-201ENST00000526271 ZNF557Q8N988 423 aaPredicted RBP14.7□□□□□ -0.06
CPSF1-201ENST00000526271 SLC39A7Q92504 469 aa14.7□□□□□ -0.06
CPSF1-201ENST00000526271 VOPP1Q96AW1 172 aa14.7□□□□□ -0.06
CPSF1-201ENST00000526271 NOX5Q96PH1 765 aa14.7□□□□□ -0.06
CPSF1-201ENST00000526271 PSMB7Q99436 277 aa14.7□□□□□ -0.06
CPSF1-201ENST00000526271 ST7Q9NRC1 585 aa14.7□□□□□ -0.06
CPSF1-201ENST00000526271 AJAP1Q9UKB5 411 aaPredicted RBP14.7□□□□□ -0.06
CPSF1-201ENST00000526271 CHD5Q8TDI0 1954 aa14.69□□□□□ -0.06
CPSF1-201ENST00000526271 MAST4O15021 2626 aa14.69□□□□□ -0.06
CPSF1-201ENST00000526271 CKMT2P17540 419 aa14.69□□□□□ -0.06
CPSF1-201ENST00000526271 ACP1P24666 158 aa14.69□□□□□ -0.06
CPSF1-201ENST00000526271 VASPP50552 380 aaPredicted RBP14.69□□□□□ -0.06
CPSF1-201ENST00000526271 TLE3Q04726 772 aa14.69□□□□□ -0.06
CPSF1-201ENST00000526271 STILQ15468 1287 aa14.69□□□□□ -0.06
CPSF1-201ENST00000526271 C6orf118Q5T5N4 469 aa14.69□□□□□ -0.06
CPSF1-201ENST00000526271 TRIM69Q86WT6 500 aa14.69□□□□□ -0.06
CPSF1-201ENST00000526271 DEFB106AQ8N104 65 aa14.69□□□□□ -0.06
CPSF1-201ENST00000526271 SLC22A18ASQ8N1D0 253 aa14.69□□□□□ -0.06
CPSF1-201ENST00000526271 STK32AQ8WU08 396 aa14.69□□□□□ -0.06
CPSF1-201ENST00000526271 ZNF606Q8WXB4 792 aa14.69□□□□□ -0.06
CPSF1-201ENST00000526271 KLK6Q92876 244 aa14.69□□□□□ -0.06
CPSF1-201ENST00000526271 ARRDC3Q96B67 414 aa14.69□□□□□ -0.06
CPSF1-201ENST00000526271 BTN2A3PQ96KV6 586 aa14.69□□□□□ -0.06
CPSF1-201ENST00000526271 CEP63Q96MT8 703 aa14.69□□□□□ -0.06
CPSF1-201ENST00000526271 SLC2A13Q96QE2 648 aa14.69□□□□□ -0.06
CPSF1-201ENST00000526271 SPAG5Q96R06 1193 aa14.69□□□□□ -0.06
CPSF1-201ENST00000526271 MED15Q96RN5 788 aa14.69□□□□□ -0.06
CPSF1-201ENST00000526271 CPXM1Q96SM3 734 aa14.69□□□□□ -0.06
CPSF1-201ENST00000526271 TSG101Q99816 390 aa14.69□□□□□ -0.06
CPSF1-201ENST00000526271 MYOCQ99972 504 aa14.69□□□□□ -0.06
CPSF1-201ENST00000526271 FZD3Q9NPG1 666 aa14.69□□□□□ -0.06
CPSF1-201ENST00000526271 SNX10Q9Y5X0 201 aa14.69□□□□□ -0.06
CPSF1-201ENST00000526271 K7ERQ8 282 aa14.68□□□□□ -0.06
CPSF1-201ENST00000526271 SNAP91O60641 907 aa14.68□□□□□ -0.06
CPSF1-201ENST00000526271 CNTN5O94779 1100 aa14.68□□□□□ -0.06
CPSF1-201ENST00000526271 PRLRP16471 622 aa14.68□□□□□ -0.06
CPSF1-201ENST00000526271 PDCLQ13371 301 aa14.68□□□□□ -0.06
CPSF1-201ENST00000526271 AUHQ13825 339 aaKnown RBP14.68□□□□□ -0.06
CPSF1-201ENST00000526271 FGL2Q14314 439 aa14.68□□□□□ -0.06
CPSF1-201ENST00000526271 DLG2Q15700 870 aa14.68□□□□□ -0.06
CPSF1-201ENST00000526271 C5orf22Q49AR2 442 aa14.68□□□□□ -0.06
CPSF1-201ENST00000526271 CDCP2Q5VXM1 449 aa14.68□□□□□ -0.06
CPSF1-201ENST00000526271 KDM7AQ6ZMT4 941 aa14.68□□□□□ -0.06
CPSF1-201ENST00000526271 SPACA3Q8IXA5 215 aa14.68□□□□□ -0.06
CPSF1-201ENST00000526271 CACTIN-AS1Q8N1I8 211 aa14.68□□□□□ -0.06
CPSF1-201ENST00000526271 ZNF843Q8N446 348 aa14.68□□□□□ -0.06
CPSF1-201ENST00000526271 DDX50Q9BQ39 737 aaKnown RBP14.68□□□□□ -0.06
CPSF1-201ENST00000526271 FEM1AQ9BSK4 669 aa14.68□□□□□ -0.06
CPSF1-201ENST00000526271 INTS2Q9H0H0 1204 aaKnown RBP14.68□□□□□ -0.06
CPSF1-201ENST00000526271 POPDC2Q9HBU9 364 aa14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms