RNA–Protein interactions for RNA: ENST00000525064.5

CLNS1A-202, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 3 BASIC

Gene CLNS1A, Length 1,121 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-202ENST00000525064 IL1BP01584 269 aa12.16□□□□□ -0.46
CLNS1A-202ENST00000525064 NOS2P35228 1153 aa12.16□□□□□ -0.46
CLNS1A-202ENST00000525064 KRT9P35527 623 aa12.16□□□□□ -0.46
CLNS1A-202ENST00000525064 SULT1E1P49888 294 aa12.16□□□□□ -0.46
CLNS1A-202ENST00000525064 CCT8P50990 548 aa12.16□□□□□ -0.46
CLNS1A-202ENST00000525064 PLK1P53350 603 aa12.16□□□□□ -0.46
CLNS1A-202ENST00000525064 RNASE9P60153 205 aaKnown RBP12.16□□□□□ -0.46
CLNS1A-202ENST00000525064 SLC12A1Q13621 1099 aa12.16□□□□□ -0.46
CLNS1A-202ENST00000525064 SHBQ15464 509 aa12.16□□□□□ -0.46
CLNS1A-202ENST00000525064 POM121L1PQ3SYA9 428 aa12.16□□□□□ -0.46
CLNS1A-202ENST00000525064 ALFQ53S48 1182 aa12.16□□□□□ -0.46
CLNS1A-202ENST00000525064 TTC39BQ5VTQ0 682 aaPredicted RBP12.16□□□□□ -0.46
CLNS1A-202ENST00000525064 TAF3Q5VWG9 929 aa12.16□□□□□ -0.46
CLNS1A-202ENST00000525064 SND1Q7KZF4 910 aaKnown RBP eCLIP12.16□□□□□ -0.46
CLNS1A-202ENST00000525064 ADAT2Q7Z6V5 191 aaKnown RBP12.16□□□□□ -0.46
CLNS1A-202ENST00000525064 ZNF397Q8NF99 534 aaPredicted RBP12.16□□□□□ -0.46
CLNS1A-202ENST00000525064 OR2T34Q8NGX1 318 aa12.16□□□□□ -0.46
CLNS1A-202ENST00000525064 OR14C36Q8NHC7 312 aa12.16□□□□□ -0.46
CLNS1A-202ENST00000525064 RHBDD1Q8TEB9 315 aa12.16□□□□□ -0.46
CLNS1A-202ENST00000525064 TBCBQ99426 244 aa12.16□□□□□ -0.46
CLNS1A-202ENST00000525064 PSMB7Q99436 277 aa12.16□□□□□ -0.46
CLNS1A-202ENST00000525064 NPY6RQ99463 290 aa12.16□□□□□ -0.46
CLNS1A-202ENST00000525064 NAA15Q9BXJ9 866 aaKnown RBP12.16□□□□□ -0.46
CLNS1A-202ENST00000525064 SIK2Q9H0K1 926 aa12.16□□□□□ -0.46
CLNS1A-202ENST00000525064 SLC12A6Q9UHW9 1150 aa12.16□□□□□ -0.46
CLNS1A-202ENST00000525064 SARDHQ9UL12 918 aa12.16□□□□□ -0.46
CLNS1A-202ENST00000525064 FZD4Q9ULV1 537 aa12.16□□□□□ -0.46
CLNS1A-202ENST00000525064 FAM208BQ5VWN6 2430 aa12.16□□□□□ -0.46
CLNS1A-202ENST00000525064 TRPM6Q9BX84 2022 aa12.15□□□□□ -0.46
CLNS1A-202ENST00000525064 A0A1W2PR77 199 aa12.15□□□□□ -0.46
CLNS1A-202ENST00000525064 LRRC72A6NJI9 287 aa12.15□□□□□ -0.46
CLNS1A-202ENST00000525064 CBX4O00257 560 aa12.15□□□□□ -0.46
CLNS1A-202ENST00000525064 VILLO15195 856 aa12.15□□□□□ -0.46
CLNS1A-202ENST00000525064 SNAP91O60641 907 aa12.15□□□□□ -0.46
CLNS1A-202ENST00000525064 RTN2O75298 545 aa12.15□□□□□ -0.46
CLNS1A-202ENST00000525064 DKK1O94907 266 aa12.15□□□□□ -0.46
CLNS1A-202ENST00000525064 ADH1BP00325 375 aa12.15□□□□□ -0.46
CLNS1A-202ENST00000525064 SLC2A3P11169 496 aa12.15□□□□□ -0.46
CLNS1A-202ENST00000525064 CYP11B1P15538 503 aa12.15□□□□□ -0.46
CLNS1A-202ENST00000525064 GOT1P17174 413 aa12.15□□□□□ -0.46
CLNS1A-202ENST00000525064 C5AR1P21730 350 aa12.15□□□□□ -0.46
CLNS1A-202ENST00000525064 CDH5P33151 784 aaPredicted RBP12.15□□□□□ -0.46
CLNS1A-202ENST00000525064 RDXP35241 583 aaKnown RBP12.15□□□□□ -0.46
CLNS1A-202ENST00000525064 RACK1P63244 317 aaKnown RBP12.15□□□□□ -0.46
CLNS1A-202ENST00000525064 SCAPQ12770 1279 aa12.15□□□□□ -0.46
CLNS1A-202ENST00000525064 ELAVL3Q14576 367 aaKnown RBP12.15□□□□□ -0.46
CLNS1A-202ENST00000525064 C5orf22Q49AR2 442 aa12.15□□□□□ -0.46
CLNS1A-202ENST00000525064 KLHDC7AQ5VTJ3 777 aa12.15□□□□□ -0.46
CLNS1A-202ENST00000525064 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP12.15□□□□□ -0.46
CLNS1A-202ENST00000525064 Q6ZVU0 165 aa12.15□□□□□ -0.46
CLNS1A-202ENST00000525064 NOP9Q86U38 636 aaKnown RBP12.15□□□□□ -0.46
CLNS1A-202ENST00000525064 XYLT1Q86Y38 959 aa12.15□□□□□ -0.46
CLNS1A-202ENST00000525064 GATAD2AQ86YP4 633 aa12.15□□□□□ -0.46
CLNS1A-202ENST00000525064 ZNF683Q8IZ20 524 aa12.15□□□□□ -0.46
CLNS1A-202ENST00000525064 FAM131CQ96AQ9 280 aa12.15□□□□□ -0.46
CLNS1A-202ENST00000525064 NOX5Q96PH1 765 aa12.15□□□□□ -0.46
CLNS1A-202ENST00000525064 FEM1AQ9BSK4 669 aa12.15□□□□□ -0.46
CLNS1A-202ENST00000525064 TKTL2Q9H0I9 626 aa12.15□□□□□ -0.46
CLNS1A-202ENST00000525064 SYNCQ9H7C4 482 aa12.15□□□□□ -0.46
CLNS1A-202ENST00000525064 ARHGEF38Q9NXL2 777 aa12.15□□□□□ -0.46
CLNS1A-202ENST00000525064 TAB2Q9NYJ8 693 aa12.15□□□□□ -0.46
CLNS1A-202ENST00000525064 SLC25A13Q9UJS0 675 aa12.15□□□□□ -0.46
CLNS1A-202ENST00000525064 APOBEC2Q9Y235 224 aaKnown RBP12.15□□□□□ -0.46
CLNS1A-202ENST00000525064 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.14□□□□□ -0.47
CLNS1A-202ENST00000525064 A0A1B0GTQ1 180 aa12.14□□□□□ -0.47
CLNS1A-202ENST00000525064 PES1O00541 588 aaKnown RBP12.14□□□□□ -0.47
CLNS1A-202ENST00000525064 ATP9BO43861 1147 aa12.14□□□□□ -0.47
CLNS1A-202ENST00000525064 MT-CO1P00395 513 aa12.14□□□□□ -0.47
CLNS1A-202ENST00000525064 CTSLP07711 333 aa12.14□□□□□ -0.47
CLNS1A-202ENST00000525064 ERCC5P28715 1186 aaPredicted RBP12.14□□□□□ -0.47
CLNS1A-202ENST00000525064 FLT3P36888 993 aa12.14□□□□□ -0.47
CLNS1A-202ENST00000525064 GABRB2P47870 512 aa12.14□□□□□ -0.47
CLNS1A-202ENST00000525064 CXCR3P49682 368 aa12.14□□□□□ -0.47
CLNS1A-202ENST00000525064 KLK7P49862 253 aa12.14□□□□□ -0.47
CLNS1A-202ENST00000525064 CCR5P51681 352 aa12.14□□□□□ -0.47
CLNS1A-202ENST00000525064 C21orf59P57076 290 aa12.14□□□□□ -0.47
CLNS1A-202ENST00000525064 SULT2A1Q06520 285 aa12.14□□□□□ -0.47
CLNS1A-202ENST00000525064 ZNF177Q13360 481 aaPredicted RBP12.14□□□□□ -0.47
CLNS1A-202ENST00000525064 DLG2Q15700 870 aa12.14□□□□□ -0.47
CLNS1A-202ENST00000525064 RAB6CQ53S08 254 aa12.14□□□□□ -0.47
CLNS1A-202ENST00000525064 FAM102AQ5T9C2 384 aaPredicted RBP12.14□□□□□ -0.47
CLNS1A-202ENST00000525064 AGBL4Q5VU57 503 aa12.14□□□□□ -0.47
CLNS1A-202ENST00000525064 CCNI2Q6ZMN8 369 aaPredicted RBP12.14□□□□□ -0.47
CLNS1A-202ENST00000525064 FAM114A1Q8IWE2 563 aa12.14□□□□□ -0.47
CLNS1A-202ENST00000525064 SH2D3CQ8N5H7 860 aa12.14□□□□□ -0.47
CLNS1A-202ENST00000525064 TMEM35BQ8NCS4 154 aa12.14□□□□□ -0.47
CLNS1A-202ENST00000525064 OR8D1Q8WZ84 308 aa12.14□□□□□ -0.47
CLNS1A-202ENST00000525064 SPAG5Q96R06 1193 aa12.14□□□□□ -0.47
CLNS1A-202ENST00000525064 ACE2Q9BYF1 805 aaPredicted RBP12.14□□□□□ -0.47
CLNS1A-202ENST00000525064 RAB6CQ9H0N0 254 aa12.14□□□□□ -0.47
CLNS1A-202ENST00000525064 NUP62CLQ9H1M0 184 aa12.14□□□□□ -0.47
CLNS1A-202ENST00000525064 GANQ9H2C0 597 aa12.14□□□□□ -0.47
CLNS1A-202ENST00000525064 AASDHPPTQ9NRN7 309 aa12.14□□□□□ -0.47
CLNS1A-202ENST00000525064 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.14□□□□□ -0.47
CLNS1A-202ENST00000525064 MPP6Q9NZW5 540 aa12.14□□□□□ -0.47
CLNS1A-202ENST00000525064 VPS28Q9UK41 221 aa12.14□□□□□ -0.47
CLNS1A-202ENST00000525064 TBC1D30Q9Y2I9 924 aa12.14□□□□□ -0.47
CLNS1A-202ENST00000525064 LAMA5O15230 3695 aa12.14□□□□□ -0.47
CLNS1A-202ENST00000525064 DSPP15924 2871 aaKnown RBP12.13□□□□□ -0.47
CLNS1A-202ENST00000525064 CACNA1GO43497 2377 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms