RNA–Protein interactions for RNA: ENST00000524922.1

CD44-212, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 352 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-212ENST00000524922 A6NNC1 897 aa1.98□□□□□ -2.09
CD44-212ENST00000524922 KIR2DS3K7RE56 304 aa1.98□□□□□ -2.09
CD44-212ENST00000524922 M0QZQ0 153 aa1.98□□□□□ -2.09
CD44-212ENST00000524922 KCNQ3O43525 872 aa1.98□□□□□ -2.09
CD44-212ENST00000524922 KRT86O43790 486 aa1.98□□□□□ -2.09
CD44-212ENST00000524922 CT47B1P0C2W7 299 aaPredicted RBP1.98□□□□□ -2.09
CD44-212ENST00000524922 TMEM225BP0DP42 221 aa1.98□□□□□ -2.09
CD44-212ENST00000524922 ST6GAL1P15907 406 aa1.98□□□□□ -2.09
CD44-212ENST00000524922 TPH1P17752 444 aa1.98□□□□□ -2.09
CD44-212ENST00000524922 NDUFS1P28331 727 aa1.98□□□□□ -2.09
CD44-212ENST00000524922 ALDH1B1P30837 517 aa1.98□□□□□ -2.09
CD44-212ENST00000524922 TM4SF4P48230 202 aa1.98□□□□□ -2.09
CD44-212ENST00000524922 CARSP49589 748 aaKnown RBP1.98□□□□□ -2.09
CD44-212ENST00000524922 EIF5P55010 431 aaKnown RBP1.98□□□□□ -2.09
CD44-212ENST00000524922 P2RX3P56373 397 aa1.98□□□□□ -2.09
CD44-212ENST00000524922 TXNL4AP83876 142 aaKnown RBP1.98□□□□□ -2.09
CD44-212ENST00000524922 DMWDQ09019 674 aa1.98□□□□□ -2.09
CD44-212ENST00000524922 SREBF2Q12772 1141 aa1.98□□□□□ -2.09
CD44-212ENST00000524922 ITPK1Q13572 414 aa1.98□□□□□ -2.09
CD44-212ENST00000524922 KRT81Q14533 505 aa1.98□□□□□ -2.09
CD44-212ENST00000524922 POLD3Q15054 466 aaPredicted RBP1.98□□□□□ -2.09
CD44-212ENST00000524922 NFE2Q16621 373 aaPredicted RBP1.98□□□□□ -2.09
CD44-212ENST00000524922 PIK3CD-AS1Q5SR53 167 aa1.98□□□□□ -2.09
CD44-212ENST00000524922 FAM102BQ5T8I3 360 aa1.98□□□□□ -2.09
CD44-212ENST00000524922 CST9Q5W186 159 aa1.98□□□□□ -2.09
CD44-212ENST00000524922 ABLIM2Q6H8Q1 611 aa1.98□□□□□ -2.09
CD44-212ENST00000524922 MZT2AQ6P582 158 aa1.98□□□□□ -2.09
CD44-212ENST00000524922 LVRNQ6Q4G3 990 aa1.98□□□□□ -2.09
CD44-212ENST00000524922 ZNF474Q6S9Z5 364 aaPredicted RBP1.98□□□□□ -2.09
CD44-212ENST00000524922 KYAT3Q6YP21 454 aaKnown RBP1.98□□□□□ -2.09
CD44-212ENST00000524922 USP43Q70EL4 1123 aa1.98□□□□□ -2.09
CD44-212ENST00000524922 ARL14EPQ8N8R7 260 aaPredicted RBP1.98□□□□□ -2.09
CD44-212ENST00000524922 FAM71DQ8N9W8 422 aa1.98□□□□□ -2.09
CD44-212ENST00000524922 SLC44A5Q8NCS7 719 aa1.98□□□□□ -2.09
CD44-212ENST00000524922 FAM156AQ8NDB6 213 aa1.98□□□□□ -2.09
CD44-212ENST00000524922 LRTOMTQ8WZ04 291 aa1.98□□□□□ -2.09
CD44-212ENST00000524922 CELF1Q92879 486 aaKnown RBP1.98□□□□□ -2.09
CD44-212ENST00000524922 MIB2Q96AX9 1013 aa1.98□□□□□ -2.09
CD44-212ENST00000524922 COG3Q96JB2 828 aa1.98□□□□□ -2.09
CD44-212ENST00000524922 NLRP4Q96MN2 994 aa1.98□□□□□ -2.09
CD44-212ENST00000524922 ZPBPQ9BS86 351 aa1.98□□□□□ -2.09
CD44-212ENST00000524922 TEX13AQ9BXU3 409 aaPredicted RBP1.98□□□□□ -2.09
CD44-212ENST00000524922 RNF26Q9BY78 433 aaPredicted RBP1.98□□□□□ -2.09
CD44-212ENST00000524922 PAPOLBQ9NRJ5 636 aaKnown RBP1.98□□□□□ -2.09
CD44-212ENST00000524922 THSD1Q9NS62 852 aa1.98□□□□□ -2.09
CD44-212ENST00000524922 C1orf112Q9NSG2 853 aa1.98□□□□□ -2.09
CD44-212ENST00000524922 HDAC9Q9UKV0 1011 aa1.98□□□□□ -2.09
CD44-212ENST00000524922 ABT1Q9ULW3 272 aaKnown RBP1.98□□□□□ -2.09
CD44-212ENST00000524922 LTN1O94822 1766 aa1.98□□□□□ -2.09
CD44-212ENST00000524922 LAMB1P07942 1786 aa1.98□□□□□ -2.09
CD44-212ENST00000524922 LAMA2P24043 3122 aaKnown RBP1.97□□□□□ -2.09
CD44-212ENST00000524922 CDH23Q9H251 3354 aa1.97□□□□□ -2.09
CD44-212ENST00000524922 SCN7AQ01118 1682 aa1.97□□□□□ -2.09
CD44-212ENST00000524922 OR2W5A6NFC9 320 aa1.97□□□□□ -2.09
CD44-212ENST00000524922 TPP1O14773 563 aa1.97□□□□□ -2.09
CD44-212ENST00000524922 DDNO94850 711 aaPredicted RBP1.97□□□□□ -2.09
CD44-212ENST00000524922 SCGB1D2O95969 90 aa1.97□□□□□ -2.09
CD44-212ENST00000524922 ZBED1O96006 694 aa1.97□□□□□ -2.09
CD44-212ENST00000524922 SERPINB2P05120 415 aa1.97□□□□□ -2.09
CD44-212ENST00000524922 DUSP1P28562 367 aa1.97□□□□□ -2.09
CD44-212ENST00000524922 HOXA11P31270 313 aaPredicted RBP1.97□□□□□ -2.09
CD44-212ENST00000524922 IL6STP40189 918 aaPredicted RBP1.97□□□□□ -2.09
CD44-212ENST00000524922 CRKLP46109 303 aaKnown RBP1.97□□□□□ -2.09
CD44-212ENST00000524922 ALDH7A1P49419 539 aaKnown RBP1.97□□□□□ -2.09
CD44-212ENST00000524922 PGGT1BP53609 377 aa1.97□□□□□ -2.09
CD44-212ENST00000524922 KRTAP10-5P60370 271 aa1.97□□□□□ -2.09
CD44-212ENST00000524922 HYAL1Q12794 435 aa1.97□□□□□ -2.09
CD44-212ENST00000524922 SMTNL2Q2TAL5 461 aa1.97□□□□□ -2.09
CD44-212ENST00000524922 MANEAQ5SRI9 462 aa1.97□□□□□ -2.09
CD44-212ENST00000524922 RNF220Q5VTB9 566 aa1.97□□□□□ -2.09
CD44-212ENST00000524922 RGMBQ6NW40 437 aa1.97□□□□□ -2.09
CD44-212ENST00000524922 KIAA0408Q6ZU52 694 aa1.97□□□□□ -2.09
CD44-212ENST00000524922 YAF2Q8IY57 180 aa1.97□□□□□ -2.09
CD44-212ENST00000524922 TCEAL8Q8IYN2 117 aa1.97□□□□□ -2.09
CD44-212ENST00000524922 MAGEB6Q8N7X4 407 aa1.97□□□□□ -2.09
CD44-212ENST00000524922 JDP2Q8WYK2 163 aa1.97□□□□□ -2.09
CD44-212ENST00000524922 PIGKQ92643 395 aa1.97□□□□□ -2.09
CD44-212ENST00000524922 INPP5DQ92835 1189 aa1.97□□□□□ -2.09
CD44-212ENST00000524922 EME1Q96AY2 570 aa1.97□□□□□ -2.09
CD44-212ENST00000524922 ZNF845Q96IR2 970 aaPredicted RBP1.97□□□□□ -2.09
CD44-212ENST00000524922 VPS50Q96JG6 964 aa1.97□□□□□ -2.09
CD44-212ENST00000524922 GDF15Q99988 308 aa1.97□□□□□ -2.09
CD44-212ENST00000524922 TUBB6Q9BUF5 446 aa1.97□□□□□ -2.09
CD44-212ENST00000524922 HTATIP2Q9BUP3 242 aa1.97□□□□□ -2.09
CD44-212ENST00000524922 CINPQ9BW66 212 aaPredicted RBP1.97□□□□□ -2.09
CD44-212ENST00000524922 ARHGAP39Q9C0H5 1083 aa1.97□□□□□ -2.09
CD44-212ENST00000524922 MYLK2Q9H1R3 596 aa1.97□□□□□ -2.09
CD44-212ENST00000524922 SPAG4Q9NPE6 437 aa1.97□□□□□ -2.09
CD44-212ENST00000524922 ASNSD1Q9NWL6 643 aa1.97□□□□□ -2.09
CD44-212ENST00000524922 RNF186Q9NXI6 227 aa1.97□□□□□ -2.09
CD44-212ENST00000524922 NCKIPSDQ9NZQ3 722 aa1.97□□□□□ -2.09
CD44-212ENST00000524922 PCDHA7Q9UN72 937 aa1.97□□□□□ -2.09
CD44-212ENST00000524922 TRPM7Q96QT4 1865 aa1.97□□□□□ -2.09
CD44-212ENST00000524922 CACNA1HO95180 2353 aa1.96□□□□□ -2.09
CD44-212ENST00000524922 KDM3BQ7LBC6 1761 aa1.96□□□□□ -2.1
CD44-212ENST00000524922 PAPPA2Q9BXP8 1791 aa1.96□□□□□ -2.1
CD44-212ENST00000524922 IFITM10A6NMD0 228 aa1.96□□□□□ -2.1
CD44-212ENST00000524922 F8W810 466 aa1.96□□□□□ -2.1
CD44-212ENST00000524922 PODXLO00592 558 aa1.96□□□□□ -2.1
CD44-212ENST00000524922 SGPL1O95470 568 aa1.96□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms