RNA–Protein interactions for RNA: ENST00000523441.1

SDCBP-211, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 543 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-211ENST00000523441 UBXN6Q9BZV1 441 aa12.01□□□□□ -0.49
SDCBP-211ENST00000523441 KCTD10Q9H3F6 313 aa12.01□□□□□ -0.49
SDCBP-211ENST00000523441 XPO7Q9UIA9 1087 aaKnown RBP12.01□□□□□ -0.49
SDCBP-211ENST00000523441 MTMR6Q9Y217 621 aa12.01□□□□□ -0.49
SDCBP-211ENST00000523441 UBR5O95071 2799 aaPredicted RBP12.01□□□□□ -0.49
SDCBP-211ENST00000523441 COL27A1Q8IZC6 1860 aaPredicted RBP12□□□□□ -0.49
SDCBP-211ENST00000523441 A0A1W2PQU0 124 aa12□□□□□ -0.49
SDCBP-211ENST00000523441 PDXKO00764 312 aa12□□□□□ -0.49
SDCBP-211ENST00000523441 IRAK2O43187 625 aa12□□□□□ -0.49
SDCBP-211ENST00000523441 PLRG1O43660 514 aaKnown RBP12□□□□□ -0.49
SDCBP-211ENST00000523441 TNFSF15O95150 251 aa12□□□□□ -0.49
SDCBP-211ENST00000523441 C7P10643 843 aa12□□□□□ -0.49
SDCBP-211ENST00000523441 LRMPQ12912 555 aa12□□□□□ -0.49
SDCBP-211ENST00000523441 SRSF6Q13247 344 aaKnown RBP12□□□□□ -0.49
SDCBP-211ENST00000523441 ELAVL3Q14576 367 aaKnown RBP12□□□□□ -0.49
SDCBP-211ENST00000523441 MS4A13Q5J8X5 152 aa12□□□□□ -0.49
SDCBP-211ENST00000523441 MPP7Q5T2T1 576 aa12□□□□□ -0.49
SDCBP-211ENST00000523441 GUSBP11Q6P575 273 aa12□□□□□ -0.49
SDCBP-211ENST00000523441 PTAR1Q7Z6K3 402 aaPredicted RBP12□□□□□ -0.49
SDCBP-211ENST00000523441 IQCHQ86VS3 1027 aa12□□□□□ -0.49
SDCBP-211ENST00000523441 SLC9A9Q8IVB4 645 aa12□□□□□ -0.49
SDCBP-211ENST00000523441 ZNF557Q8N988 423 aaPredicted RBP12□□□□□ -0.49
SDCBP-211ENST00000523441 DDX50Q9BQ39 737 aaKnown RBP12□□□□□ -0.49
SDCBP-211ENST00000523441 FAM13BQ9NYF5 915 aa12□□□□□ -0.49
SDCBP-211ENST00000523441 DMTF1Q9Y222 760 aa12□□□□□ -0.49
SDCBP-211ENST00000523441 SSUH2Q9Y2M2 353 aa12□□□□□ -0.49
SDCBP-211ENST00000523441 BOD1L1Q8NFC6 3051 aa12□□□□□ -0.49
SDCBP-211ENST00000523441 ITIH6Q6UXX5 1313 aa12□□□□□ -0.49
SDCBP-211ENST00000523441 LY6G6EA0A0G2JKS1 128 aa11.99□□□□□ -0.49
SDCBP-211ENST00000523441 MUSKO15146 869 aa11.99□□□□□ -0.49
SDCBP-211ENST00000523441 KLRC4O43908 158 aa11.99□□□□□ -0.49
SDCBP-211ENST00000523441 DXOO77932 396 aaKnown RBP11.99□□□□□ -0.49
SDCBP-211ENST00000523441 PCDH8O95206 1070 aa11.99□□□□□ -0.49
SDCBP-211ENST00000523441 LTFP02788 710 aa11.99□□□□□ -0.49
SDCBP-211ENST00000523441 FAM87AP0C7U9 286 aa11.99□□□□□ -0.49
SDCBP-211ENST00000523441 GIMD1P0DJR0 217 aa11.99□□□□□ -0.49
SDCBP-211ENST00000523441 DUSP3P51452 185 aaPredicted RBP11.99□□□□□ -0.49
SDCBP-211ENST00000523441 CLN3Q13286 438 aa11.99□□□□□ -0.49
SDCBP-211ENST00000523441 DEFB133Q30KQ1 61 aa11.99□□□□□ -0.49
SDCBP-211ENST00000523441 AGBL4Q5VU57 503 aa11.99□□□□□ -0.49
SDCBP-211ENST00000523441 Q6ZVU0 165 aa11.99□□□□□ -0.49
SDCBP-211ENST00000523441 USP53Q70EK8 1073 aa11.99□□□□□ -0.49
SDCBP-211ENST00000523441 INTS8Q75QN2 995 aaKnown RBP11.99□□□□□ -0.49
SDCBP-211ENST00000523441 ZNF396Q96N95 335 aaPredicted RBP11.99□□□□□ -0.49
SDCBP-211ENST00000523441 SLC46A1Q96NT5 459 aa11.99□□□□□ -0.49
SDCBP-211ENST00000523441 SPAG5Q96R06 1193 aa11.99□□□□□ -0.49
SDCBP-211ENST00000523441 MAGEF1Q9HAY2 307 aa11.99□□□□□ -0.49
SDCBP-211ENST00000523441 TMEM8AQ9HCN3 771 aa11.99□□□□□ -0.49
SDCBP-211ENST00000523441 KLHL11Q9NVR0 708 aa11.99□□□□□ -0.49
SDCBP-211ENST00000523441 ENTPD2Q9Y5L3 495 aa11.99□□□□□ -0.49
SDCBP-211ENST00000523441 U3KQA8 63 aa11.99□□□□□ -0.49
SDCBP-211ENST00000523441 SYNJ2BP-COX16A0A087WUM0 186 aa11.98□□□□□ -0.49
SDCBP-211ENST00000523441 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.98□□□□□ -0.49
SDCBP-211ENST00000523441 K7ESM1 405 aa11.98□□□□□ -0.49
SDCBP-211ENST00000523441 KPNA3O00505 521 aaPredicted RBP11.98□□□□□ -0.49
SDCBP-211ENST00000523441 PPP6R2O75170 966 aa11.98□□□□□ -0.49
SDCBP-211ENST00000523441 IGLV3-27P01718 113 aa11.98□□□□□ -0.49
SDCBP-211ENST00000523441 AKT2P31751 481 aa11.98□□□□□ -0.49
SDCBP-211ENST00000523441 ME1P48163 572 aa11.98□□□□□ -0.49
SDCBP-211ENST00000523441 MXI1P50539 228 aa11.98□□□□□ -0.49
SDCBP-211ENST00000523441 OVGP1Q12889 678 aa11.98□□□□□ -0.49
SDCBP-211ENST00000523441 ZNF177Q13360 481 aaPredicted RBP11.98□□□□□ -0.49
SDCBP-211ENST00000523441 TCEA2Q15560 299 aa11.98□□□□□ -0.49
SDCBP-211ENST00000523441 TGIF1Q15583 401 aa11.98□□□□□ -0.49
SDCBP-211ENST00000523441 TCERG1LQ5VWI1 586 aa11.98□□□□□ -0.49
SDCBP-211ENST00000523441 FAM46CQ5VWP2 391 aa11.98□□□□□ -0.49
SDCBP-211ENST00000523441 KRT39Q6A163 491 aa11.98□□□□□ -0.49
SDCBP-211ENST00000523441 MSANTD2Q6P1R3 559 aa11.98□□□□□ -0.49
SDCBP-211ENST00000523441 ATG14Q6ZNE5 492 aa11.98□□□□□ -0.49
SDCBP-211ENST00000523441 DSG4Q86SJ6 1040 aa11.98□□□□□ -0.49
SDCBP-211ENST00000523441 TRIM69Q86WT6 500 aa11.98□□□□□ -0.49
SDCBP-211ENST00000523441 SLC22A18ASQ8N1D0 253 aa11.98□□□□□ -0.49
SDCBP-211ENST00000523441 ARL14Q8N4G2 192 aa11.98□□□□□ -0.49
SDCBP-211ENST00000523441 FBXL13Q8NEE6 735 aa11.98□□□□□ -0.49
SDCBP-211ENST00000523441 FAM149B1Q96BN6 582 aa11.98□□□□□ -0.49
SDCBP-211ENST00000523441 CCDC97Q96F63 343 aaPredicted RBP11.98□□□□□ -0.49
SDCBP-211ENST00000523441 FCRL2Q96LA5 508 aaPredicted RBP11.98□□□□□ -0.49
SDCBP-211ENST00000523441 CCNL2Q96S94 520 aaPredicted RBP11.98□□□□□ -0.49
SDCBP-211ENST00000523441 UPF2Q9HAU5 1272 aaKnown RBP11.98□□□□□ -0.49
SDCBP-211ENST00000523441 CNGB3Q9NQW8 809 aa11.98□□□□□ -0.49
SDCBP-211ENST00000523441 EVA1BQ9NVM1 165 aa11.98□□□□□ -0.49
SDCBP-211ENST00000523441 RAB20Q9NX57 234 aa11.98□□□□□ -0.49
SDCBP-211ENST00000523441 NLGN3Q9NZ94 848 aa11.98□□□□□ -0.49
SDCBP-211ENST00000523441 COX16Q9P0S2 106 aa11.98□□□□□ -0.49
SDCBP-211ENST00000523441 TJP2Q9UDY2 1190 aa11.98□□□□□ -0.49
SDCBP-211ENST00000523441 IPO11Q9UI26 975 aaKnown RBP11.98□□□□□ -0.49
SDCBP-211ENST00000523441 SLC25A13Q9UJS0 675 aa11.98□□□□□ -0.49
SDCBP-211ENST00000523441 NAALADL1Q9UQQ1 740 aa11.98□□□□□ -0.49
SDCBP-211ENST00000523441 UTP20O75691 2785 aaKnown RBP11.98□□□□□ -0.49
SDCBP-211ENST00000523441 RP1P56715 2156 aa11.98□□□□□ -0.49
SDCBP-211ENST00000523441 FLNCQ14315 2725 aa11.97□□□□□ -0.49
SDCBP-211ENST00000523441 NEMP2A6NFY4 417 aa11.97□□□□□ -0.49
SDCBP-211ENST00000523441 C1QTNF3-AMACRE9PGA6 284 aa11.97□□□□□ -0.49
SDCBP-211ENST00000523441 M0QYV0 167 aa11.97□□□□□ -0.49
SDCBP-211ENST00000523441 GABBR2O75899 941 aa11.97□□□□□ -0.49
SDCBP-211ENST00000523441 TACR2P21452 398 aa11.97□□□□□ -0.49
SDCBP-211ENST00000523441 PSMC2P35998 433 aaKnown RBP11.97□□□□□ -0.49
SDCBP-211ENST00000523441 TAS2R38P59533 333 aa11.97□□□□□ -0.49
SDCBP-211ENST00000523441 CUL4AQ13619 759 aa11.97□□□□□ -0.49
SDCBP-211ENST00000523441 ARID5BQ14865 1188 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms