RNA–Protein interactions for RNA: ENST00000523387.5

CSMD1-212, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 2

Gene CSMD1, Length 3,989 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-212ENST00000523387 PORCNQ9H237 461 aa9.2□□□□□ -0.94
CSMD1-212ENST00000523387 LRRC4Q9HBW1 653 aa9.2□□□□□ -0.94
CSMD1-212ENST00000523387 VPS45Q9NRW7 570 aa9.2□□□□□ -0.94
CSMD1-212ENST00000523387 NCKIPSDQ9NZQ3 722 aa9.2□□□□□ -0.94
CSMD1-212ENST00000523387 VANGL2Q9ULK5 521 aa9.2□□□□□ -0.94
CSMD1-212ENST00000523387 AKT3Q9Y243 479 aa9.2□□□□□ -0.94
CSMD1-212ENST00000523387 KIAA1551Q9HCM1 1747 aa9.2□□□□□ -0.94
CSMD1-212ENST00000523387 SYCE1LA8MT33 242 aa9.2□□□□□ -0.94
CSMD1-212ENST00000523387 ZBTB14O43829 449 aa9.2□□□□□ -0.94
CSMD1-212ENST00000523387 CHRNGP07510 517 aa9.2□□□□□ -0.94
CSMD1-212ENST00000523387 F7P08709 466 aaPredicted RBP9.2□□□□□ -0.94
CSMD1-212ENST00000523387 MMP10P09238 476 aa9.2□□□□□ -0.94
CSMD1-212ENST00000523387 NAB1Q13506 487 aa9.2□□□□□ -0.94
CSMD1-212ENST00000523387 ARL13AQ5H913 290 aaPredicted RBP9.2□□□□□ -0.94
CSMD1-212ENST00000523387 SAMD4BQ5PRF9 694 aaKnown RBP9.2□□□□□ -0.94
CSMD1-212ENST00000523387 PERM1Q5SV97 790 aa9.2□□□□□ -0.94
CSMD1-212ENST00000523387 NCCRP1Q6ZVX7 275 aaPredicted RBP9.2□□□□□ -0.94
CSMD1-212ENST00000523387 CAMK1DQ8IU85 385 aa9.2□□□□□ -0.94
CSMD1-212ENST00000523387 SLC4A11Q8NBS3 891 aa9.2□□□□□ -0.94
CSMD1-212ENST00000523387 MED10Q9BTT4 135 aa9.2□□□□□ -0.94
CSMD1-212ENST00000523387 EML4Q9HC35 981 aaKnown RBP9.2□□□□□ -0.94
CSMD1-212ENST00000523387 ATAD3AQ9NVI7 634 aa9.2□□□□□ -0.94
CSMD1-212ENST00000523387 PCDHGC3Q9UN70 934 aa9.2□□□□□ -0.94
CSMD1-212ENST00000523387 WDR37Q9Y2I8 494 aa9.2□□□□□ -0.94
CSMD1-212ENST00000523387 ACOT9Q9Y305 439 aa9.2□□□□□ -0.94
CSMD1-212ENST00000523387 HEMK1Q9Y5R4 338 aaPredicted RBP9.2□□□□□ -0.94
CSMD1-212ENST00000523387 NFASCO94856 1347 aa9.2□□□□□ -0.94
CSMD1-212ENST00000523387 KCNU1A8MYU2 1149 aa9.2□□□□□ -0.94
CSMD1-212ENST00000523387 NR5A2O00482 541 aa9.2□□□□□ -0.94
CSMD1-212ENST00000523387 TFEBP19484 476 aa9.2□□□□□ -0.94
CSMD1-212ENST00000523387 PCSK6P29122 969 aa9.2□□□□□ -0.94
CSMD1-212ENST00000523387 LRPAP1P30533 357 aa9.2□□□□□ -0.94
CSMD1-212ENST00000523387 NDST1P52848 882 aa9.2□□□□□ -0.94
CSMD1-212ENST00000523387 FSTL1Q12841 308 aa9.2□□□□□ -0.94
CSMD1-212ENST00000523387 DLG2Q15700 870 aa9.2□□□□□ -0.94
CSMD1-212ENST00000523387 OLFML1Q6UWY5 402 aa9.2□□□□□ -0.94
CSMD1-212ENST00000523387 XKR5Q6UX68 686 aa9.2□□□□□ -0.94
CSMD1-212ENST00000523387 ACOT1Q86TX2 421 aa9.2□□□□□ -0.94
CSMD1-212ENST00000523387 KCNMB4Q86W47 210 aa9.2□□□□□ -0.94
CSMD1-212ENST00000523387 AMIGO3Q86WK7 504 aa9.2□□□□□ -0.94
CSMD1-212ENST00000523387 DHRSXQ8N5I4 330 aa9.2□□□□□ -0.94
CSMD1-212ENST00000523387 PCDH19Q8TAB3 1148 aa9.2□□□□□ -0.94
CSMD1-212ENST00000523387 LPAR1Q92633 364 aa9.2□□□□□ -0.94
CSMD1-212ENST00000523387 VPS39Q96JC1 886 aa9.2□□□□□ -0.94
CSMD1-212ENST00000523387 BCLAF3A2AJT9 711 aaKnown RBP9.19□□□□□ -0.94
CSMD1-212ENST00000523387 E2F6O75461 281 aa9.19□□□□□ -0.94
CSMD1-212ENST00000523387 SMIM18P0DKX4 95 aa9.19□□□□□ -0.94
CSMD1-212ENST00000523387 TPSB2P20231 275 aa9.19□□□□□ -0.94
CSMD1-212ENST00000523387 SULT1E1P49888 294 aa9.19□□□□□ -0.94
CSMD1-212ENST00000523387 SLC12A1Q13621 1099 aa9.19□□□□□ -0.94
CSMD1-212ENST00000523387 TPSAB1Q15661 275 aa9.19□□□□□ -0.94
CSMD1-212ENST00000523387 UGP2Q16851 508 aa9.19□□□□□ -0.94
CSMD1-212ENST00000523387 SPANXN3Q5MJ09 141 aa9.19□□□□□ -0.94
CSMD1-212ENST00000523387 DACT2Q5SW24 774 aa9.19□□□□□ -0.94
CSMD1-212ENST00000523387 OTUD3Q5T2D3 398 aaPredicted RBP9.19□□□□□ -0.94
CSMD1-212ENST00000523387 XRRA1Q6P2D8 792 aa9.19□□□□□ -0.94
CSMD1-212ENST00000523387 C15orf39Q6ZRI6 1047 aa9.19□□□□□ -0.94
CSMD1-212ENST00000523387 KDELC2Q7Z4H8 507 aa9.19□□□□□ -0.94
CSMD1-212ENST00000523387 RAB44Q7Z6P3 723 aaPredicted RBP9.19□□□□□ -0.94
CSMD1-212ENST00000523387 KIAA2013Q8IYS2 634 aa9.19□□□□□ -0.94
CSMD1-212ENST00000523387 USP33Q8TEY7 942 aa9.19□□□□□ -0.94
CSMD1-212ENST00000523387 KIF12Q96FN5 646 aa9.19□□□□□ -0.94
CSMD1-212ENST00000523387 SIGLEC10Q96LC7 697 aa9.19□□□□□ -0.94
CSMD1-212ENST00000523387 APBA2Q99767 749 aa9.19□□□□□ -0.94
CSMD1-212ENST00000523387 OMDQ99983 421 aa9.19□□□□□ -0.94
CSMD1-212ENST00000523387 GPATCH1Q9BRR8 931 aaKnown RBP9.19□□□□□ -0.94
CSMD1-212ENST00000523387 LHX5Q9H2C1 402 aa9.19□□□□□ -0.94
CSMD1-212ENST00000523387 CHST12Q9NRB3 414 aa9.19□□□□□ -0.94
CSMD1-212ENST00000523387 TBCCD1Q9NVR7 557 aa9.19□□□□□ -0.94
CSMD1-212ENST00000523387 UBP1Q9NZI7 540 aa9.19□□□□□ -0.94
CSMD1-212ENST00000523387 TRIM17Q9Y577 477 aa9.19□□□□□ -0.94
CSMD1-212ENST00000523387 KPNA4O00629 521 aaPredicted RBP9.19□□□□□ -0.94
CSMD1-212ENST00000523387 FAM189A1O60320 539 aa9.19□□□□□ -0.94
CSMD1-212ENST00000523387 TTKP33981 857 aa9.19□□□□□ -0.94
CSMD1-212ENST00000523387 CDKL1Q00532 357 aa9.19□□□□□ -0.94
CSMD1-212ENST00000523387 ZNF618Q5T7W0 954 aa9.19□□□□□ -0.94
CSMD1-212ENST00000523387 METTL25Q8N6Q8 603 aa9.19□□□□□ -0.94
CSMD1-212ENST00000523387 TCF12Q99081 682 aa9.19□□□□□ -0.94
CSMD1-212ENST00000523387 OXCT2Q9BYC2 517 aaPredicted RBP9.19□□□□□ -0.94
CSMD1-212ENST00000523387 SPAG4Q9NPE6 437 aa9.19□□□□□ -0.94
CSMD1-212ENST00000523387 MKS1Q9NXB0 559 aa9.19□□□□□ -0.94
CSMD1-212ENST00000523387 ITGB1BP2Q9UKP3 347 aa9.19□□□□□ -0.94
CSMD1-212ENST00000523387 PSAT1Q9Y617 370 aa9.19□□□□□ -0.94
CSMD1-212ENST00000523387 SH3PXD2BA1X283 911 aa9.19□□□□□ -0.94
CSMD1-212ENST00000523387 FAM149AA5PLN7 773 aa9.19□□□□□ -0.94
CSMD1-212ENST00000523387 J3QRK9 145 aa9.19□□□□□ -0.94
CSMD1-212ENST00000523387 INPP4BO15327 924 aa9.19□□□□□ -0.94
CSMD1-212ENST00000523387 DEAF1O75398 565 aaPredicted RBP9.19□□□□□ -0.94
CSMD1-212ENST00000523387 ALDOAP04075 364 aaKnown RBP9.19□□□□□ -0.94
CSMD1-212ENST00000523387 NR2C2P49116 596 aa9.19□□□□□ -0.94
CSMD1-212ENST00000523387 SLC7A2P52569 658 aa9.19□□□□□ -0.94
CSMD1-212ENST00000523387 PLK1P53350 603 aa9.19□□□□□ -0.94
CSMD1-212ENST00000523387 TMEM132DQ14C87 1099 aa9.19□□□□□ -0.94
CSMD1-212ENST00000523387 FAM83EQ2M2I3 478 aa9.19□□□□□ -0.94
CSMD1-212ENST00000523387 LIPMQ5VYY2 423 aa9.19□□□□□ -0.94
CSMD1-212ENST00000523387 PGM2L1Q6PCE3 622 aa9.19□□□□□ -0.94
CSMD1-212ENST00000523387 ZPBP2Q6X784 338 aa9.19□□□□□ -0.94
CSMD1-212ENST00000523387 CCDC80Q76M96 950 aa9.19□□□□□ -0.94
CSMD1-212ENST00000523387 NANOGNBQ7Z5D8 188 aa9.19□□□□□ -0.94
CSMD1-212ENST00000523387 CBR4Q8N4T8 237 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms